openwiki-wiki/themes/index.md

Files

• Theme 1 · Organoid culture and equipment (CelVivo / 3Brain) - Synthesis page for Robin's organoid culture and equipment theme — CelVivo ClinoStar/ClinoReactor for 3D suspension culture and 3Brain HD-MEA for neural/cardiac electrophysiology readout.
• Theme 2 · 3D bioprinting (Cellink / BIONOVA) - Synthesis page for Robin's 3D bioprinting theme — Cellink BIO X / BIONOVA X / Lumen X extrusion and DLP printing hardware for tissue engineering, drug tablets, and scaffold fabrication.
• Theme 3 · AI Agent tools (Hermes / Codex / MiniMax code) - Synthesis page for Robin's daily-driver AI agent stack — Hermes Agent on WSL, MiniMax code on the desktop, Codex CLI fallback, OpenWiki as cross-agent memory substrate, and supporting toolchain (RustDesk, Gitea, Wiki.js, RAGFlow).
• Theme 4 · Local LLM deployment (Ollama / bge-reranker / RAGFlow) - Synthesis page for Robin's local-LLM fleet — Ollama serve + qwen2.5vl:7b vision model + BAAI/bge-m3 embeddings (Ollama + LM Studio) + bge-reranker rerank + RAGFlow KB retrieval + adjacent NAS subsystems (NocoDB / SeaFile / Wiki.js / Feishu mail).
• Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM) - Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting). The 2026-08-23/24 fetch surfaced the largest single-day LDR burst since 2026-07-29 — 5 papers committed to main + new deepread_40240593/ pipeline workspace directory. The 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 fetches observed vault HEAD unchanged at 9d4767c7 (vault silent for the 1st + 2nd + 3rd + 4th + 5th consecutive fetches since the 2026-08-24/25 SECOND 5-paper LDR burst, 5 calendar days stale). The 2026-08-31 fetch observed vault HEAD bumped 9d4767c7 → 391e4713 — THIRD consecutive single-day 5-paper LDR burst (Stewart + Aiello + Nguyen + Miao + Yan, all CelVivo-anchored, all in the NEW obsidian-vault/04-Literature/Deep-Reads/CelVivo/ capital-V subfolder — Robin's first parallel-naming deep-read subfolder convention), ending the 5-day vault silence; combined with the 2026-08-23/24 + 2026-08-24/25 clusters, 15 LDR files in 8 calendar days = the largest sustained 8-day research output in Robin's vault activity log. The 2026-09-01 + 2026-09-02 + 2026-09-03 + 2026-09-04 + 2026-09-05 + 2026-09-06 + 2026-09-07 + 2026-09-08 + 2026-09-09 fetches observed vault HEAD unchanged at 391e4713 (vault silent for the 1st + 2nd + 3rd + 4th + 5th + 6th + 7th + 8th + 9th consecutive fetches since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR burst, 9 calendar days stale). The 2026-09-11 fetch observed vault HEAD bumped 391e4713 → 09bec367 — vault silence streak BROKEN after 11 calendar days with 2 new vault commits: 1fd63019 2026-09-10 (Tomas 2026 HGSC carboplatin/PARPi spheroid+organoid, Western University, 0 vendor callouts) + 09bec367 2026-09-11 (Vijakumaran 2026 brain-organoid air-liquid interface oxygen engineering, first v4 Flywheel auto-sink pipeline entry); the pipeline has resumed after the 11-day pause. The 4 carry-forward untracked directories (Review + templates + celvivo_commercial + deepread_40240593) bump their carry-forward counts to 30/25/25/18 days at the 2026-09-11T18:14Z fetch — the Review/ + templates/ + celvivo_commercial/ entries remain confirmed one-off (carrying forward unchanged since the 2026-08-28 fetch) and continue as stale / not recurring carry-forward notes; the deepread_40240593/ working-folder pipeline hypothesis continues to weaken (mtime unchanged across 17 consecutive silent fetches since the 2026-08-24/25 burst). The 2026-09-13T18:08Z fetch is the 31st git-repo-1 fetch of the 2026-08-07 streak + the 2nd consecutive vault-silent fetch after the Tomas 2026 + Vijakumaran 2026 resumption (vault HEAD unchanged at 09bec367); 1 working-tree modification was observed at 04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md (mtime 2026-09-13 11:55:42 +0800) — Robin actively editing the MOC index file but NOT yet committed; the 4 carry-forward untracked directories bump to 32/27/27/20 days at the 2026-09-13T18:08Z fetch (the highest carry-forward durations of the 2026-08-07 streak); 4 new automated wiki commits in the 48-hour window (7cfb801 sources-sync 2026-09-12 twenty-ninth + 999a37d daily update 2026-09-12 + 0447186 daily update 2026-09-13 + 5f33bd3 sources-sync 2026-09-13 thirtieth) bumped wiki HEAD 55d930f → 5f33bd3; the 8-dirty-file baseline (down from the prior 10-dirty-file baseline) shows the daily-update cycle cleared index.md + quickstart.md + sources/git-repo.md + themes.md while sources/openwiki-version-drift.md was newly re-touched; synthesis-layer impact is none because vault produced no new external evidence.