81 lines
11 KiB
Markdown
81 lines
11 KiB
Markdown
---
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type: "Reference"
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title: "Git repo — evidence index (Obsidian vault + OpenWiki wiki, Robin)"
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description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD `391e4713`, 2026-09-08, **vault HEAD unchanged** at the 2026-08-31T18:09Z fetch level for the 8th consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster, **0 new vault commits** in the 2026-09-07T18:08Z → 2026-09-08T18:07Z 24-hour window, **8 calendar days of vault silence** since the 2026-08-31 cluster (Yan + Stewart + Nguyen + Aiello + Miao all `obsidian-vault/04-Literature/Deep-Reads/CelVivo/`) remains the most recent committed vault activity); carry-forward untracked-file set bumps: `Review/zhou2023_computer_vision_microfluidics.md` 27 → **28-day carry-forward** (25 → **26 fetches silent**, stale carry-forward note per 2026-08-28 demotion), `celvivo_commercial/` + `templates/` 22 → **23-day carry-forward** (both confirmed one-off alongside `Review/` at the 2026-08-28 fetch, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 + 2026-09-03 + 2026-09-04 + 2026-09-05 + 2026-09-06 + 2026-09-07 + **2026-09-08** fetches), `deepread_40240593/` 15 → **16-day carry-forward** (mtime unchanged across **15 consecutive silent fetches** since creation, working-folder pipeline hypothesis continuing to weaken); and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD `556d937d54b58f2dfb157567725b84251cd01f91`, 2026-09-08, **2 new automated wiki commits in the 2026-09-07T18:08Z → 2026-09-08T18:07Z 24-hour window: `556d937` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-08 — the **twenty-fifth** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `56aeb69` 2026-09-07 + `0f8555e` 2026-09-06 + `0be3b8a` 2026-09-05 + `88635ed` 2026-09-04 + `58168e7` 2026-09-03 + `cedbb7f` 2026-09-02 + `0890fdb` 2026-09-01 + `9582dea` 2026-08-31 + `d56da3a` 2026-08-30 + `37d1ba6` 2026-08-29 + `c992dd6` 2026-08-28 + `502281f` 2026-08-27 + `ebb95c0` 2026-08-26 + `1003b92` 2026-08-25 + `127c2dc` 2026-08-24 + `8f8f767` 2026-08-23 + `43d4548` 2026-08-22 + `f6c2576` 2026-08-21 + `bd30339` 2026-08-20 + `dcb53a2` 2026-08-19 + `1fc73ae` 2026-08-18 + `be49285` 2026-08-17 + `997b648` 2026-08-16 + `2507925` 2026-08-15) committed `sources/{nocodb,ragflow,seafile,wikijs}.md` re-touched by the sources-sync, then `57be545` chore: daily update 2026-09-08 (per `git show --stat 57be545` the commit touched 10 files including `.last-update.json` + `index.md` + `quickstart.md` + `sources/README.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/web-search.md` + `themes/05-robin-research.md` + `themes/index.md`); the very next synthesis edits from the HN-1 2026-09-08 (skipped, next pull after the 2026-09-06 18:00 UTC pull — the 2026-09-08T18:07Z fetch is the git-repo-1 slot in the daily update cycle) + web-search-1 2026-09-08 (skipped) + this git-repo-1 2026-09-08T18:07Z run re-touched files leaving the dirty count at **10 per the manifest `changedFiles` list** — `M .last-update.json` + `M index.md` + `M quickstart.md` + `M sources/hackernews.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes.md` — **up from 4** at the 2026-09-07T18:08Z fetch because the `556d937` sources-sync on 2026-09-08 re-touched the 4 source-sync files (`sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md`) that the `57be545` daily update had cleared via commit, plus the CLI metadata cycle re-touched `themes.md` (the daily update cycle had re-touched `themes.md` at the 2026-09-07 fetch but not at this fetch) + `.last-update.json` + `index.md` + `quickstart.md` + `sources/hackernews.md` + `sources/web-search.md` (5 metadata-cycle files); the 10-dirty-file list does not include `sources/git-repo.md` + `sources/README.md` + `sources/index.md` (the `57be545` daily update on 2026-09-08 re-touched them then cleared them via commit) or `themes/05-robin-research.md` + `themes/index.md` (the `57be545` daily update on 2026-09-08 re-touched them then cleared them via commit)**. This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
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tags: [sources, git-repo, vault, wiki, manifest, 2026-09-08, 2026-09-07, 2026-09-06, 2026-09-05, 2026-09-04, 2026-09-03, 2026-09-02, 2026-09-01, 2026-08-31, vault-silent-8d, twenty-fifth-sources-sync, review-templates-celvivo-commercial-confirmed-one-off, deepread-40240593-sixteen-silent-fetches]
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timestamp: 2026-09-08T18:07:00Z
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---
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# Git repo — evidence index
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This page is the **compact source-evidence index** for the local git-repo connector, which ingests Robin's Obsidian vault (`/home/ldw/workspace`) and the local OpenWiki wiki (`/home/ldw/.openwiki/wiki`). Each ingestion run writes a JSON manifest under `~/.openwiki/connectors/git-repo/raw/`.
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## Source config
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- Connector config path: `~/.openwiki/connectors/git-repo/config.json`
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- Two configured local repos:
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- `obsidian-vault` at `/home/ldw/workspace` (branch: `main`, HEAD `391e4713`, 2026-08-31 — 35 commits since 2026-08-03 fetch)
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- `openwiki-wiki` at `/home/ldw/.openwiki/wiki` (branch: `main`, HEAD `556d937`, 2026-09-08)
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- Authentication: local path only — no remote, no credentials
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## Latest manifest
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- `~/.openwiki/connectors/git-repo/raw/2026-09-08T18-07-32-623Z/manifest.json` (generated 2026-09-08T18:07:32Z)
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- Vault HEAD: `391e47131679ce9edf0f525236e78ebb13e0d232` (unchanged since 2026-08-31T13:42 +0800)
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- Wiki HEAD: `556d937d54b58f2dfb157567725b84251cd01f91` (bumped from `3e04ce7` at 2026-09-08)
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- **0 new vault commits** in the 24-hour window (vault silent for the 8th consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster)
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- **2 new automated wiki commits** in the 24-hour window (`556d937` sources-sync 2026-09-08 — the **twenty-fifth** consecutive sources-sync + `57be545` daily update 2026-09-08)
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- **10 uncommitted wiki files** in working tree per the manifest `changedFiles` list (up from 4 at the 2026-09-07T18:08Z fetch; the `57be545` daily update cleared `sources/{git-repo,README,index}.md` + `themes/05-robin-research.md` + `themes/index.md` via commit, but the `556d937` sources-sync on 2026-09-08 re-touched the 4 source-sync files `sources/{nocodb,ragflow,seafile,wikijs}.md` that the daily update had cleared — leaving those 4 + the 5 CLI metadata-cycle files `.last-update.json` + `index.md` + `quickstart.md` + `sources/hackernews.md` + `sources/web-search.md` + `themes.md` still dirty after the synthesis edits = **10-dirty-file baseline, up from 4**)
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## Carry-forward untracked directories
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| Directory / file | Carry-forward | Fetches silent | Status |
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| --- | ---: | ---: | --- |
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| `Review/zhou2023_computer_vision_microfluidics.md` | **28-day** | 26 | stale carry-forward note (confirmed one-off at 2026-08-27 fetch, demoted at 2026-08-28 fetch) |
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| `celvivo_commercial/` | **23-day** | 23 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
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| `templates/` | **23-day** | 23 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
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| `deepread_40240593/` | **16-day** | 15 | working-folder pipeline hypothesis continuing to weaken (mtime unchanged across 15 consecutive silent fetches since creation) |
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## Robin 8-07 added — untracked regional agent files (context only)
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The 8 untracked regional agent files Robin added on 2026-08-07 (per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)") remain in the vault working tree as uncommitted artifacts, with no mtime change observed since the 2026-08-07 baseline:
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- `02-Clients/Agents/全国经销商地图-2026-0807.md`
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- `02-Clients/Agents/华东-2026-0807.md`
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- `02-Clients/Agents/华北-2026-0807.md`
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- `02-Clients/Agents/华南-2026-0807.md`
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- `02-Clients/Agents/山东-2026-0807.md`
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- `02-Clients/Agents/湖北-2026-0807.md`
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- `02-Clients/Agents/西北-2026-0807.md`
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- `02-Clients/Agents/西南-2026-0807.md`
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These files are documented in [`/sources/distributors-china-2026.md`](/sources/distributors-china-2026.md) (with privacy rules per [`/sources/agents.md`](/sources/agents.md)) — no fresh synthesis update needed at this fetch.
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## Recent commits — vault (last 5)
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The most recent vault commits remain the 2026-08-31 THIRD consecutive single-day 5-paper CelVivo LDR burst (no new commits in the 24-hour window):
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1. `391e4713` 2026-08-31 — deep-read: Yan 2024 Cell Reports TMEM106B SARS-CoV-2 ACE2-independent brain organoids (CelVivo)
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2. `4fca0123` 2026-08-31 — deep-read: Miao 2025 Cell vascularized lung/gut organoids (CelVivo ClinoReactor)
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3. `fad7e21e` 2026-08-31 — deep-read: Nguyen 2024 npj Viruses JEV G4 2022 Australia brain organoids (CelVivo)
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4. `030f31ed` 2026-08-31 — deep-read: Aiello 2025 EMBO reports reproducible brain organoids (CelVivo ClinoReactor)
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5. `eb24ab72` 2026-08-31 — deep-read: Stewart 2023 Front Microbiol BA.5/XBB neurotropic brain organoids (CelVivo)
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## Recent commits — wiki (last 5)
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1. `57be545` 2026-09-08 — chore: daily update 2026-09-08 (10 files modified per `git show --stat 57be545`)
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2. `556d937` 2026-09-08 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-08, **twenty-fifth** consecutive sources-sync)
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3. `3e04ce7` 2026-09-07 — chore: daily update 2026-09-07 (16 files modified per `git show --stat 3e04ce7`)
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4. `56aeb69` 2026-09-07 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-07, twenty-fourth consecutive sources-sync)
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5. `2c75e4a` 2026-09-06 — chore: daily update 2026-09-06 (16 files modified per `git show --stat 2c75e4a`)
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## Synthesis-policy — this run
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- Vault delta: empty (no new commits, no new mtime changes; the 8 Robin-8-07 regional agent files carry forward unchanged).
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- Wiki delta: automated maintenance only (CLI metadata cycle + sources-sync + daily update).
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- Synthesis-layer impact: **none**. The themes / commitments / open-questions / personal-logistics pages are independent of the wiki-side automated maintenance commits.
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- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-08T18:07Z)" paragraph on `/quickstart.md` for the full delta list.
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## Previous run
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- 2026-09-07T18:08Z — vault HEAD unchanged at `391e4713`, 2 new wiki commits (`3e04ce7` + `56aeb69` — the **twenty-fourth** consecutive sources-sync), 4-dirty-file baseline (down from 11), the 4 carry-forward untracked directories bumped to 27/22/22/15-day carry-forward. See [`/themes/05-robin-research.md`](/themes/05-robin-research.md) + `/quickstart.md` for the full synthesis of that run. |