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chore: daily update 2026-08-16

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@@ -34,7 +34,14 @@ tags: [quickstart, navigation, openwiki, status]
## Current status
- **Wiki state:** initialized — Hacker News, the local Obsidian vault, and Tavily web search are active and feeding `/sources/hackernews.md`, `/sources/git-repo.md`, `/sources/web-search.md`, and `/themes.md`. All 5 synthesis themes (`/themes/01-organoid-equipment.md`, `/themes/02-bioprinting.md`, `/themes/03-ai-agents.md`, `/themes/04-local-llm.md`, `/themes/05-robin-research.md`) are now generated.
- **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08, 2026-08-10, and 2026-08-12 web-search update attempts were skipped because the connector is not enabled and `TAVILY_API_KEY` is empty; the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below.
- **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 web-search update attempts were skipped because the connector is not enabled and `TAVILY_API_KEY` is empty; the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below.
**Latest update — git-repo-1 (2026-08-15T18:07Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-15T18-07-49-711Z/manifest.json`. **Vault HEAD** unchanged at `297f106d2b137af3480261052ff080cbc48d5b48` (same as the 2026-08-12 and 2026-08-13 fetches) — **0 new vault commits** in the 2026-08-13T18:08Z → 2026-08-15T18:07Z 48-hour window; the 2026-08-12 Liang 2026 4-commit LDR cycle remains the most recent vault activity across both the 2026-08-13 and 2026-08-15 fetches. **No new untracked vault files** appeared in the 24-hour window — the untracked file set is unchanged from the 2026-08-13 fetch (23 untracked files, including the still-untracked `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-new-Review/-subfolder file, 8 × `02-Clients/Agents/区域-2026-0807.md` distributor-rebuild files, `__pycache__/...pyc` build noise, the `文悦精读流水线.yml` v1/v2/v3/v4/v5-clean variants, etc.). **Wiki HEAD** bumped from `1737454` (2026-08-13) to **`2507925e27b83b4f9d2e6f3b9c939d081a90f9f2`** (2026-08-15T02:31 +0800); **4 new wiki-side commits** in the 48-hour window — `021e929` chore: daily update 2026-08-14 (2026-08-14T02:18) + `6258717` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-14, 2026-08-14T02:30) + `173b58c` chore: daily update 2026-08-15 (2026-08-15T02:00, added OKF frontmatter to nocodb.md / ragflow.md / seafile.md / wikijs.md) + `2507925` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-15, 2026-08-15T02:31). **One operational issue surfaced**: the `2507925` 2026-08-15 sources-sync committed **empty count values** for NocoDB / SeaFile / Wiki.js / RAGFlow (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000) — the on-disk source configs are unaffected (NocoDB / Wiki.js / RAGFlow backends at 10.10.10.254 are unchanged); this is a wiki-side CRON issue with the auto-source-sync job, not a connector config issue. Data is recoverable from `git show 1737454:sources/nocodb.md` etc. for any future recovery commit; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected. **10 uncommitted wiki-side edits** in working tree (carryover from the prior HN-1 2026-08-13 + HN-1 2026-08-15 + web-search-1 2026-08-15 + this git-repo-1 2026-08-15 runs — `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/index.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`; pending the next CLI orchestration commit). Wiki edits this run: (a) `/sources/git-repo.md` — refreshed frontmatter HEAD pointers (vault HEAD → `297f106d` unchanged, wiki HEAD `1737454` → `2507925`, tags + `2026-08-15`, timestamp → `2026-08-15T18:07:49Z`), refreshed the Connector / State section to the new `2026-08-15T18-07-49-711Z` raw manifest, refreshed `## obsidian-vault — working-tree status` heading + body to 2026-08-15 (0 new commits, no new untracked files; `Review/zhou2023_computer_vision_microfluidics.md` carries forward as still-untracked), refreshed `## openwiki-wiki — working-tree status` heading + body to 2026-08-15 (4 new wiki commits + 10 uncommitted files + the count-data wipe surfaced in the Notable-entity section), refreshed the Recent-commits table with the 4 new wiki commits on top of the prior 2026-08-13 cluster, refreshed the Summary-of-last-24-hours table with the 2026-08-13T18:08Z → 2026-08-15T18:07Z window data (0 vault commits / 4 wiki commits / 10 uncommitted wiki files / operational issue row), refreshed the Notable-entity section to add a "2026-08-15 sources-sync bug" entry (count-data wipe + recovery path + wiki-synthesis independence) + carry-forward note on the `Review/` subfolder entry, refreshed the Synthesis-policy section to add this run's delta summary + the operational-issue observation; (b) `/themes/05-robin-research.md` — vault-snapshot metadata refreshed (fetch timestamp → `2026-08-15T18:07:49Z`, raw-manifest path → the new `2026-08-15T18-07-49-711Z/manifest.json`); the vault HEAD pointer stays `297f106d` (unchanged across both 2026-08-13 and 2026-08-15 fetches); (c) `/quickstart.md` — added this "Latest update — git-repo-1 (2026-08-15T18:07Z)" paragraph; updated the Backlog git-repo entry to reflect the new wiki HEAD `2507925` + 4 new wiki commits + 10 uncommitted files + the operational issue note. **No `/themes.md` row change, no commitment row, no open-question row, no personal-logistics item** — the vault delta is empty (no new commits, no new untracked files) and the synthesis laLine truncated
**Latest update — web-search-1 attempted 2026-08-15 skipped.** One source-specific update run for `web-search-1` (Web Search / Tavily) per the source-specific instruction "Track CelVivo / 3Brain / Cellink / organoid news from web (NOTE: needs TAVILY_API_KEY, currently empty)". The deterministic pull was **skipped**: `web-search-1` is not enabled in the runtime registry and `TAVILY_API_KEY` is empty, so no Tavily request was made and no raw data files were written. This is the **fourth consecutive skip** on the same code path (after 2026-08-08 + 2026-08-10 + 2026-08-12); the latest successful Tavily pull remains 2026-08-03 18:08 UTC. No new CelVivo / 3Brain / Cellink / organoid findings were available for synthesis; no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. Discord between on-disk `~/.openwiki/connectors/web-search/config.json` (which shows `enabled: true` + 6 Chinese queries) and the runtime registry (still reports the connector as disabled) is the same operational issue noted on the 2026-08-08 / 2026-08-10 / 2026-08-12 runs — recorded for traceability only, not a wiki-synthesis concern. Wiki edits this run: (a) `/sources/web-search.md` — added a "2026-08-15 attempted update — skipped" section ahead of the 2026-08-12 entry, following the established 5-field structure (Status / Authentication / Coverage / Synthesis / Operational note); updated the header line to mention the fourth skip; added `2026-08-15` to the `tags` list; (b) `/quickstart.md` — added this "Latest update — web-search-1 attempted 2026-08-15 skipped" paragraph; updated the Web Search connector row in "Current status" and "Adding sources" to reflect the 4-entry skip streak; updated the Backlog web-search entry likewise. **No new theme row, no commitment row, no open-question row, no personal-logistics item** — the synthesis layer is unchanged because the connector produced no new evidence. Prior run was **hackernews-1 update (2026-08-15T18:00Z)** — see next paragraph for the Auto-research with codex / Working with AI as Leadership flag-for-traceability notes.
**Latest update — hackernews-1 (2026-08-15T18:00Z).** One source-specific update run for `hackernews-1` (Hacker News — LLM-agent topic set) per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=hackernews` and wrote raw data at `~/.openwiki/connectors/hackernews/raw/2026-08-15T18-00-02-001Z/hackernews-results.json`. 2 feeds (`top` 30 IDs / 19 resolved + `best` 30 IDs / 4 resolved) → **19 unique items** (4 overlap: `49303202` Firefox uBlock Origin, `49304447` Going Dark law enforcement hacking, `49307592` "The other Sean Byrne doesn't exist", `49309549` Auto-research with codex 232x Faster Kernel). 6 search queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`) returned **zero hits across all six** — all six Algolia queries returned `nbHits=null`. The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **fourth pull since 2026-08-07 to have a fully-zero Algolia lane** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 pulls; the 2026-08-10 + 2026-08-12 pulls had Algolia hits that were all string-collision noise rather than fully-zero); Tavily (web-search) remains the productive lane for vendor news. **One high-engagement Robin-stack-adjacent in the 19 unique top+best items** — **`49309549` Auto-research with codex: How I achieved a 232x Faster Kernel** (275 pts, 75 cmts, top+best, sankalp.bearblog.dev, by `tosh`) — a personal-blog essay on using Codex (OpenAI coding agent) for autonomous GPU-kernel optimization. Codex is on Robin's stack as the named fallback agent surface per [`/themes/03-ai-agents.md`](/themes/03-ai-agents.md) § "Codex CLI (fallback)", and the "auto-research" framing directly speaks to how the broader Codex community is using Codex for autonomous optimization. **Adjacent-not-promoted** per the established scope rule that Codex-wrapper / TUI / usage changes stay adjacent unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself (per the 2026-07-27 / 2026-07-30 / 2026-08-03 / 2026-08-10 / 2026-08-12 / 2026-08-13 traceability entries in `/sources/hackernews.md`). Six additional flag-for-traceability items stay adjacent-not-promoted under the existing scope discipline: **`49309451` Working with AI Feels More Like Leadership Than Coding** (151 pts, 109 cmts, top — AI-coding-agent essay, off-scope); **`49310682` First At-Home Test for Infected Ticks** (111 pts, 42 cmts, top — Smithsonian, infectious-disease diagnostics, outside Robin's 4 application domains); **`49311651` Semaglutide linked to 26% lower 5-year predicted dementia risk** (95 pts, 59 cmts, top — Alzheimer's & Dementia journal, clinical neurology / pharmacology, outside Robin's 4 application domains); **`49312008` A controversial Alzheimer's surgery is said to reverse symptoms** (62 pts, 17 cmts, top — Nature news, clinical neurology, outside Robin's 4 application domains); **`49310495` Yadda 3.0.0: BDD in the Age of AI Agents** (37 pts, 16 cmts, top — BDD testing framework, off-scope); **`49310362` Could a computer scientist build a brain?** (32 pts, 19 cmts, top — computer-science neuroscience essay, outside Robin's 4 application domains). **Key call**: this pull produces **no directly-relevant item for any `/themes.md` row** — the closest items either (a) fall outside Robin's 4 application domains (clinical neurology / pharmacology / infectious disease diagnostics / computer-science neuroscience) and stay off the `class-organoid-3d-bioprinting` watchlist per the "domain-anchored only" scope rule, or (b) sit on the AI-agent / Codex-usage lane where the established scope rule keeps Codex surface / TUI / usage changes adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself. The `class-organoid-3d-bioprinting` row stays at Last seen 2026-08-12 (no organoid item); the `agent-memory-architecture` row stays at Last seen 2026-08-13 (no OKF / MCP Memory item); the `MiniMax-m3` row stays at Last seen 2026-08-03 (no MiniMax model release); the `hermes-agent-v0-19-quicksilver` row stays at Last seen 2026-08-03 (no Hermes Agent release); the `openwiki-brand` watchlist row stays at Last seen 2026-07-16 (no positive `openwiki` hits). The HN lane's stable role is now "high-engagement agent-stack adjacents (Codex / DeepSeek / Muse Glimmer / MCP / Docker Sandboxes / Claude Code) + low-engagement application-domain watchlist items (organoid / neuroscience / Wired features)" rather than vendor-direct signals. Wiki edits this run: (a) `/sources/hackernews.md` — added new "Latest update — 2026-08-15 18:00 UTC" section ahead of the 2026-08-13 entry; demoted 2026-08-13 from "Latest" to a regular "Update" section; updated Connector section with the new raw dump path (`2026-08-15T18-00-02-001Z/hackernews-results.json`) and the new latest-fetch timestamp (Line truncated
**Latest update — git-repo-1 (2026-08-13T18:08Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-13T18-08-25-206Z/manifest.json`. **Vault HEAD** unchanged at `297f106d2b137af3480261052ff080cbc48d5b48` (same as the 2026-08-12 fetch) — **0 new vault commits** in the 24-hour window; the 2026-08-12 Liang 2026 4-commit LDR cycle remains the most recent vault activity. **1 new untracked file** appeared in the working tree: `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` — **first entry in a new `Review/` subfolder** under `04-Literature/Deep-Reads/` (Zhou 2023 computer vision + microfluidics — Robin deep-read in progress, uncommitted). Also new untracked: `__pycache__/literature_deepread_v6.cpython-312.pyc` (Python build noise, ignored). **Wiki HEAD** bumped from `c57ead4` (2026-08-12) to **`1737454ad1b4f06ff9958cc9256c0c611262e44a`** (2026-08-13); **2 new wiki-side commits** — `8ddc6d9` chore: daily update 2026-08-13 (this committed the synthesis edits from the HN-1 2026-08-13 run: MCP Memory using OKF / agent-memory-architecture refresh + 1 new theme row extension on `/themes.md`) + `1737454` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-13). **8 uncommitted wiki-side edits** in working tree (carryover from the HN-1 2026-08-13 synthesis edits that landed between the `1737454` commit and this fetch — `.last-update.json` + `quickstart.md` + `sources/hackernews.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md` + `themes.md`; pending the next CLI orchestration commit). Wiki edits this run: (a) `/sources/git-repo.md` — refreshed frontmatter HEAD pointers (vault HEAD → `297f106d` unchanged, wiki HEAD → `1737454`, tags + `2026-08-13`), refreshed Connector / State section to the new `2026-08-13T18-08-25-206Z` raw manifest, updated `## obsidian-vault — working-tree status (2026-08-13)` to flag 0 new vault commits + the 2 new untracked files (Review/ zhou2023 + __pycache__), added the new files to the working-tree status table, refreshed the Summary-of-last-24-hours table with the 2026-08-12T18:08Z → 2026-08-13T18:08Z window data (no vault commits, 1 new untracked Review/ file, 2 new wiki commits), refreshed the Notable-entity section to add a `Review/` subfolder expansion entry (first review-type subfolder in the deep-read tree), refreshed the Synthesis-policy section to note this run is **a daily-cycle follow-up (no net-new external evidence)**; (b) `/themes/05-robin-research.md` — vault snapshot metadata refreshed (fetch timestamp → 2026-08-13T18:08:25Z, working-tree state 19 → 25 untracked files, raw manifest path updated), added a new `Review/` row to the deep-read breakdown table (1 file, `zhou2023_computer_vision_microfluidics.md`, marked as **untracked** — only counts once committed), updated the 30-day research output table with a new "Subfolder expansion (uncommitted)" row + extended the by-vendor table accordingly, ER-diagram entity label updated (deep-reads `~1,204` → `~1,205`), surrounding narrative extended with the "Robin appears to be expanding the folder taxonomy to separate review-type papers from original-research papers; whether this is a one-off subfolder or the start of a recurring folder pattern is a watchlist item for the next git-repo fetch" finding. **No `/themes.md` row change, no commitment row, no open-question row, no personal-logistics item** — the Review/ subfolder expansion is a single-file structural event, not a recurring signal; the next git-repo fetch will tell whether more papers land in this subfolder or it stays a single-entry watchlist. Prior run was **hackernews-1 update (2026-08-13T18:00Z)** — see next paragraph for the MCP Memory using OKF / agent-memory-architecture refresh detail.
**Latest update — hackernews-1 (2026-08-13T18:00Z).** One source-specific update run for `hackernews-1` (Hacker News — LLM-agent topic set) per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=hackernews` and wrote raw data at `~/.openwiki/connectors/hackernews/raw/2026-08-13T18-00-02-662Z/hackernews-results.json`. 2 feeds (`top` 25 + `best` 7) → **27 unique items** (5 overlap: `49285244` DeepSeek Harness developer preview, `49281916` Codex in ChatGPT desktop app for Linux preview, `49284774` Deutsche Bank yuan clearing, `49286341` Spaghettifying DRAM, `49285982` Gloomberb). 6 search queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`) returned **zero hits across all six** — all six Algolia queries returned `nbHits=0`. The "no material HN footprint for the 4 vendor lines" finding continues to hold (this is the third pull since 2026-08-07 to have a fully-zero Algolia lane — the prior 2026-08-08 03:15 + 2026-08-08 18:00 pulls were the previous two; the 2026-08-10 + 2026-08-12 pulls had Algolia hits that were all string-collision noise); Tavily (web-search) remains the productive lane for vendor news. **One directly-relevant adjacent** in the 27 unique top+best items — **`49286073` MCP Memory – Fast Agent Memory Using Google's OKF and SQLite FTS5** (46 pts, 22 cmts, Show HN, github.com/fellowgeek/mcp-memory) — the **first HN item since the 2026-07-16 `langchain-ai/openwiki` brand signal to explicitly name Google's OKF frontmatter** (the same schema OpenWiki uses at `/index.md` frontmatter `okf_version: "0.1"` and per concept page). Refreshes `agent-memory-architecture` row on `/themes.md` Last seen → 2026-08-13 (Evidence count → 16+, plus a new MCP Memory / OKF anchor in the row description and Evidence cell). Six flag-for-traceability items stay adjacent-not-promoted under the existing scope discipline ("open-weight AI never earns a `themes.md` row" + workflow-tooling priority LOW): **`49285244` DeepSeek Harness developer preview** (422 pts top+best, 197 cmts — 4th DeepSeek-vs-MiniMax observation in 10 days, after DeepSeek V4 Flash 0731 + Tavily benchlm.ai + DeepSeek V4 Pro 0813; open-weight agent runtime, off-scope); **`49281916` Codex in ChatGPT desktop app for Linux** (394 pts top+best, 269 cmts — Codex in ChatGPT Linux desktop app preview; Codex is on Robin's stack but the established scope rule keeps Codex surface changes adjacent-not-promoted); **`49289112` Gemini 3.7 Flash** (134 pts top, 84 cmts — off-scope); **`49285327` Choosing an AI model: one prompt, 11 models, different results** (115 pts top, 56 cmts — Netlify comparison, off-scope); **`49288889` Mistral OCR 4.1** (40 pts top, 6 cmts — off-scope); **`49283063` Launch HN: Bullet (YC S26) – A Faster Coding Agent** (17 pts top, 19 cmts — YC S26 launch, off-scope). **Key call**: MCP Memory using OKF (`49286073`) is the first HN-side corroboration of the OKF+memory schema that OpenWiki has been using since at least 2026-07-16. The 46-pt engagement is moderate (above the 1-2-pt adjacent items in the 2026-08-03 sweep, below the 100+ pt threshold for high-engagement vendor releases) — but the **direct OKF reference + MCP-server delivery channel + Show HN surfacing** makes it a stronger trigger for `agent-memory-architecture` Last-seen refresh than the prior 2-pt `49156055` verginglabs Markdown-wiki post (2026-08-03) or the 1-pt `49159148` governed/approval-gated-memory post (2026-08-03). No new theme row, no new commitment row, no new open-question row, no personal-logistics item. Wiki edits this run: (a) `/sources/hackernews.md` — added new "Latest update — 2026-08-13 18:00 UTC" section ahead of the 2026-08-12 entry; demoted 2026-08-12 from "Latest" to a regular "Update" section; updated Connector section with the new raw dump path (`2026-08-13T18-00-02-662Z/hackernews-results.json`) and the new latest-fetch timestamp (`2026-08-13T18:00:30Z`); added an "agent-memory-architecture (refreshed this run)" callout section for `49286073`; added a "Flag-for-traceability: DeepSeek Harness, Codex on Linux desktop, Gemini 3.7 Flash, Mistral OCR" callout section; updated `tags` to include `2026-08-13`; (b) `/themes.md` — refreshed `agent-memory-architecture` row: Last seen → 2026-08-13, Evidence count → 16+, row description extended with the MCP Memory / OKF evidence + Evidence cell gained a new HN anchor; all other theme rows unchanged; (c) `/quickstart.md` — added this "Latest update — hackernews-1 (2026-08-13T18:00Z)" paragraph ahead of the 2026-08-12 paragraph; updated the Backlog HN section's last-refreshed date from 2026-08-12 to 2026-08-13. Prior run was **web-search-1 attempted 2026-08-12 skipped** (third consecutive skip due to runtime registry not enabled + `TAVILY_API_KEY` empty); the latest successful Tavily pull remains 2026-08-03 18:08 UTC, and nLine truncated
@@ -71,9 +78,9 @@ Deferred until Robin configures connectors or asks for specific documentation:
- **Slack evidence index** — `/sources/slack.md` (no Slack connector configured yet)
- **Notion evidence index** — `/sources/notion.md` (no Notion MCP configured yet)
- **X / Twitter evidence index** — `/sources/x.md` (no X connector configured yet)
- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-08-13 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); **third pull since 2026-08-07 to have a fully-zero Algolia lane** (after 2026-08-08 03:15 + 2026-08-08 18:00 — the 2026-08-10 and 2026-08-12 pulls had Algolia hits that were all string-collision noise) — vendor-anchored footprint remains null on the HN lane and Tavily (web-search) remains the productive lane; **one directly-relevant adjacent surfaced this pull: `49286073` MCP Memory using Google's OKF** (46 pts, 22 cmts, Show HN, github.com/fellowgeek/mcp-memory — first HN item since the 2026-07-16 `langchain-ai/openwiki` brand signal to explicitly name the OKF frontmatter that OpenWiki uses) — refreshing Last seen on the `/themes.md` `agent-memory-architecture` row → 2026-08-13 (Evidence count → 16+, plus a new MCP Memory / OKF anchor in the row description and Evidence cell); six flag-for-traceability items surfaced this run (all adjacent-not-promoted under existing scope discipline): **DeepSeek Harness developer preview** (422 pts top+best, 197 cmts — 4th DeepSeek-vs-MiniMax observation in 10 days, open-weight agent runtime, off-scope), **Codex in ChatGPT desktop app for Linux** (394 pts top+best, 269 cmts — Codex is on Robin's stack but the established scope rule keeps Codex surface changes adjacent-not-promoted), **Gemini 3.7 Flash** (134 pts top, off-scope), **Choosing an AI model: one prompt, 11 models** (115 pts top, off-scope), **Mistral OCR 4.1** (40 pts top, off-scope), **Launch HN: Bullet (YC S26)** (17 pts top, off-scope) — see HN source page)
- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08, 2026-08-10, and 2026-08-12 update attempts skipped — connector not enabled in runtime registry, `TAVILY_API_KEY` missing; disk config shows `enabled: true` + 6 Chinese queries but the runtime registry disagrees — operational concern, not a wiki-synthesis concern)
- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-13 18:08 UTC — covers Robin's Obsidian vault (HEAD `297f106d` 2026-08-12, **unchanged this fetch** — 0 new vault commits in the 24-hour window) + OpenWiki wiki (HEAD `1737454` 2026-08-13, 2 new wiki commits since 2026-08-12: `8ddc6d9` daily update 2026-08-13 + `1737454` sources-sync 2026-08-13); 13 commits since 2026-08-03 fetch including the **2026-08-12 Liang 2026 Sci Rep liver organoid fibrosis platform 4-commit LDR cycle** (`e542c977` adds file 186 lines → `8699a154` page 946 9 项 SOP 重写版 105+/122- → `aacba7aa` frontmatter title 改中文 1 line → `297f106d` page 934 修齐 5+/4-) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3 轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型; Wiki.js Id=1716, NocoDB Id=770); **25 untracked files** including 8 new `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + **the first entry in the new `Review/` subfolder** (`04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` — Zhou 2023 computer vision + microfluidics, Robin deep-read in progress, uncommitted) + `__pycache__/...pyc` Python build noise; wiki-side carries 8 uncommitted synthesis-layer edits from the prior HN-1 2026-08-13 run)
- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-08-15 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); **fourth pull since 2026-08-07 to have a fully-zero Algolia lane** (after 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 — the 2026-08-10 and 2026-08-12 pulls had Algolia hits that were all string-collision noise rather than fully-zero) — vendor-anchored footprint remains null on the HN lane and Tavily (web-search) remains the productive lane; **one high-engagement Robin-stack-adjacent surfaced this pull: `49309549` Auto-research with codex: How I achieved a 232x Faster Kernel** (275 pts, 75 cmts, top+best, sankalp.bearblog.dev, by `tosh` — same submitter as the 2026-08-08 03:15 DeepSeek V4 Flash 0731 entry, but the items themselves are unrelated) — a personal-blog essay on using Codex (OpenAI coding agent) for autonomous GPU-kernel optimization. Codex is on Robin's stack as the named fallback agent surface per `/themes/03-ai-agents.md` § "Codex CLI (fallback)", and the "auto-research" framing directly speaks to how the broader Codex community is using Codex for autonomous optimization. **Adjacent-not-promoted** per the established scope rule that Codex-wrapper / TUI / usage changes stay adjacent unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself — so no `/themes.md` row Last-seen refresh; six additional flag-for-traceability items surfaced this run (all adjacent-not-promoted under existing scope discipline): **Working with AI Feels More Like Leadership Than Coding** (151 pts top, 109 cmts — AI-coding-agent essay, off-scope), **First At-Home Test for Infected Ticks** (111 pts top, 42 cmts — Smithsonian, infectious-disease diagnostics, outside Robin's 4 application domains), **Semaglutide linked to 26% lower 5-year predicted dementia risk** (95 pts top, 59 cmts — Alzheimer's & Dementia journal, clinical neurology / pharmacology, outside Robin's 4 application domains), **A controversial Alzheimer's surgery is said to reverse symptoms** (62 pts top, 17 cmts — Nature news, clinical neurology, outside Robin's 4 application domains), **Yadda 3.0.0: BDD in the Age of AI Agents** (37 pts top, 16 cmts — BDD testing framework, off-scope), **Could a computer scientist build a brain?** (32 pts top, 19 cmts — computer-science neuroscience essay, outside Robin's 4 application domains) — see HN source page)
- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 update attempts skipped — connector not enabled in runtime registry, `TAVILY_API_KEY` missing; disk config shows `enabled: true` + 6 Chinese queries but the runtime registry disagrees — operational concern, not a wiki-synthesis concern)
- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-15 18:07 UTC — covers Robin's Obsidian vault (HEAD `297f106d` 2026-08-12, **unchanged across both the 2026-08-13 and 2026-08-15 fetches** — 0 new vault commits in the 2026-08-13T18:08Z → 2026-08-15T18:07Z 48-hour window) + OpenWiki wiki (HEAD `2507925` 2026-08-15, **4 new wiki commits since 2026-08-13**: `021e929` daily update 2026-08-14 + `6258717` sources-sync 2026-08-14 + `173b58c` daily update 2026-08-15 + `2507925` sources-sync 2026-08-15); 13 vault commits since 2026-08-03 fetch including the **2026-08-12 Liang 2026 Sci Rep liver organoid fibrosis platform 4-commit LDR cycle** (`e542c977` adds file 186 lines → `8699a154` page 946 9 项 SOP 重写版 105+/122- → `aacba7aa` frontmatter title 改中文 1 line → `297f106d` page 934 修齐 5+/4-) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3 轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型; Wiki.js Id=1716, NocoDB Id=770); **23 untracked vault files** unchanged from the 2026-08-13 fetch (no new untracked files in the 24-hour window) — including 8 × `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + **the first entry in the new `Review/` subfolder** (`04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` — Zhou 2023 computer vision + microfluidics, Robin deep-read in progress, still-uncommitted at the 2026-08-15 fetch) + `__pycache__/...pyc` Python build noise; wiki-side carries **10 uncommitted synthesis-layer edits** accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + web-search-1 2026-08-15 + this git-repo-1 2026-08-15 runs; **one operational issue surfaced this run** — the `2507925` 2026-08-15 sources-sync committed empty count values for NocoDB / SeaFile / Wiki.js / RAGFlow (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000); the on-disk source configs are unaffected; data is recoverable from `git show 1737454:sources/nocodb.md` etc. — recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected)
- **Project / people / company pages** — only created when durable entities emerge from ingested data
These are intentionally blank until there is real evidence to put in them. Populating them with placeholders would dilute the synthesis layer..