48 KiB
type, title, description, tags, timestamp
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| Reference | Git repo — evidence index (Obsidian vault + OpenWiki wiki, Robin) | Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. **Latest fetch (2026-09-19T18:04Z — 35th git-repo-1 fetch since 2026-08-07): vault HEAD unchanged at `09bec367` for the 8th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption; wiki HEAD bumped `c6e81a5` → `6e2a733` via 2 new automated wiki commits (`1ba0fb1` sources-sync 2026-09-19 — the **thirty-sixth** consecutive sources-sync — + `6e2a733` daily update 2026-09-19); 1 working-tree modification at `MOCs/MOC-类器官与3D培养.md` (mtime 2026-09-13 11:55:42 +0800 — persists uncommitted for 6 calendar days at this fetch); 5-dirty-file baseline (down from 11-dirty at the 2026-09-18 fetch — the `6e2a733` daily update cycle cleared the prior dirty list; 5 files re-touched in the working tree post-commit); carry-forward bump 37/32/32/25 → 38/33/33/26-day.** Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD `09bec367`, 2026-09-11, vault HEAD unchanged at `09bec367` for the 8th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption; the MOC working-tree modification persists uncommitted); and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD `6e2a733`, 2026-09-19, bumped from `c6e81a5` via 2 automated commits in the 24-hour window — `1ba0fb1` sources-sync thirty-sixth + `6e2a733` daily update). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here. |
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2026-09-19T18:04:00Z |
Git repo — evidence index
This page is the compact source-evidence index for the local git-repo connector, which ingests Robin's Obsidian vault (/home/ldw/workspace) and the local OpenWiki wiki (/home/ldw/.openwiki/wiki). Each ingestion run writes a JSON manifest under ~/.openwiki/connectors/git-repo/raw/.
Source config
- Connector config path:
~/.openwiki/connectors/git-repo/config.json - Two configured local repos:
obsidian-vaultat/home/ldw/workspace(branch:main, HEAD09bec36702cdbd8ef1d2644919ca337248ae6bff, 2026-09-11 — 37 commits since 2026-08-03 fetch, +2 since 2026-09-09T18:11Z fetch; vault HEAD unchanged for the 8th consecutive git-repo-1 fetch since the 2026-09-11T18:14Z resumption)openwiki-wikiat/home/ldw/.openwiki/wiki(branch:main, HEAD6e2a733ace38f6aed03156886d625160667a9e9d, 2026-09-19 — bumped fromc6e81a5cdc548fe8c90d9d74bc8e497daa5ac117via 2 automated commits in the 24-hour window)
- Authentication: local path only — no remote, no credentials
Latest manifest
~/.openwiki/connectors/git-repo/raw/2026-09-19T18-04-33-907Z/manifest.json(generated 2026-09-19T18:04Z — 35th git-repo-1 fetch since 2026-08-07)- Vault HEAD:
09bec36702cdbd8ef1d2644919ca337248ae6bff(unchanged at09bec367for the 8th consecutive fetch after the 2026-09-11T18:14Z bump from391e4713; 8 calendar days of vault silence since the 2026-09-11 resumption) - Wiki HEAD:
6e2a733ace38f6aed03156886d625160667a9e9d(bumped fromc6e81a5via 2 automated commits in the 24-hour window) - 0 new vault commits in the 24-hour window + 1 working-tree modification at
M "04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md"(mtime 2026-09-13 11:55:42 +0800; Robin actively editing MOC index file but has not yet committed — the modification now persists uncommitted for 6 calendar days at this fetch) - 2 new automated wiki commits in the 24-hour window (
1ba0fb1sources-sync 2026-09-19 — the thirty-sixth consecutive sources-sync — +6e2a733daily update 2026-09-19) - 5 uncommitted wiki files in working tree per the manifest
changedFileslist (down from the 11-dirty baseline at the 2026-09-18T18:15Z fetch —M .last-update.json+M sources/hackernews.md+M sources/index.md+M sources/web-search.md+M themes.md; the6e2a733daily update cycle cleared the prior 11-dirty list (touched 15 files includingquickstart.md+sources/git-repo.md+sources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/wikijs.md+sources/literature.md+sources/README.md+index.md+themes/05-robin-research.md+themes/index.md), then 5 files were re-touched in the working tree by the post-commit synthesis pipeline this run) - Carry-forward untracked-file bumps:
Review/zhou2023_computer_vision_microfluidics.md37 → 38-day (35 → 36 fetches silent),celvivo_commercial/+templates/32 → 33-day,deepread_40240593/25 → 26-day (mtime unchanged across 25 consecutive silent fetches since creation)
Carry-forward untracked directories
| Directory / file | Carry-forward | Fetches silent | Status |
|---|---|---|---|
Review/zhou2023_computer_vision_microfluidics.md |
38-day | 36 | stale carry-forward note (confirmed one-off at 2026-08-27 fetch, demoted at 2026-08-28 fetch) |
celvivo_commercial/ |
33-day | 33 | stale carry-forward note (confirmed one-off alongside Review/ at 2026-08-28 fetch) |
templates/ |
33-day | 33 | stale carry-forward note (confirmed one-off alongside Review/ at 2026-08-28 fetch) |
deepread_40240593/ |
26-day | 25 | working-folder pipeline hypothesis continuing to weaken (mtime unchanged across 25 consecutive silent fetches since creation) |
Robin 8-07 added — untracked regional agent files (context only)
The 8 untracked regional agent files Robin added on 2026-08-07 (per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)") remain in the vault working tree as uncommitted artifacts, with no mtime change observed since the 2026-08-07 baseline:
02-Clients/Agents/全国经销商地图-2026-0807.md02-Clients/Agents/华东-2026-0807.md02-Clients/Agents/华北-2026-0807.md02-Clients/Agents/华南-2026-0807.md02-Clients/Agents/山东-2026-0807.md02-Clients/Agents/湖北-2026-0807.md02-Clients/Agents/西北-2026-0807.md02-Clients/Agents/西南-2026-0807.md
These files are documented in /sources/distributors-china-2026.md (with privacy rules per /sources/agents.md) — no fresh synthesis update needed at this fetch.
Recent commits — vault (last 7)
The 5 most recent vault commits are the new 2 (Tomas 2026 + Vijakumaran 2026) on top of the 2026-08-31 THIRD consecutive single-day 5-paper CelVivo LDR burst. Vault HEAD bumped 391e4713 → 09bec367 — vault silence streak BROKEN after 11 calendar days:
09bec3672026-09-11 —literature: 精读 NocoDB Id=3029 Air-liquid interface-centered oxygen engineering in human br (飞轮 v4 自动 sink)(brain-organoid ALI oxygen engineering — first paper routed through the v4 Flywheel auto-sink pipeline; new file atLiterature/Deep-Reads/Organoid/vijakumaran2026-brain-organoid-ali-oxygen-engineering.md)1fd630192026-09-10 —feat(literature): Tomas 2026 HGSC carboplatin/PARPi spheroid+organoid deep-read(Western University; new file at04-Literature/Deep-Reads/tomas-2026-hgsoc-carboplatin-parpi-spheroid-organoid.md)391e47132026-08-31 — deep-read: Yan 2024 Cell Reports TMEM106B SARS-CoV-2 ACE2-independent brain organoids (CelVivo)4fca01232026-08-31 — deep-read: Miao 2025 Cell vascularized lung/gut organoids (CelVivo ClinoReactor)fad7e21e2026-08-31 — deep-read: Nguyen 2024 npj Viruses JEV G4 2022 Australia brain organoids (CelVivo)030f31ed2026-08-31 — deep-read: Aiello 2025 EMBO reports reproducible brain organoids (CelVivo ClinoReactor)eb24ab722026-08-31 — deep-read: Stewart 2023 Front Microbiol BA.5/XBB neurotropic brain organoids (CelVivo)
Recent commits — wiki (last 6)
6e2a7332026-09-19 — chore: daily update 2026-09-19 (pergit show --stat 6e2a733the commit re-touched.last-update.json+index.md+quickstart.md+sources/README.md+sources/git-repo.md+sources/hackernews.md+sources/index.md+sources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/web-search.md+sources/wikijs.md+themes.md+themes/05-robin-research.md+themes/index.md— the standard daily-update cycle; the commit cleared the prior 11-dirty-file baseline down to 5-dirty)1ba0fb12026-09-19 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-19, thirty-sixth consecutive sources-sync — the pergit show --stat 1ba0fb1commit re-touchedsources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/wikijs.md— the same 4 source-sync files)c6e81a52026-09-18 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-18, thirty-fifth consecutive sources-sync)46a508d2026-09-18 — chore: daily update 2026-09-18 (pergit show --stat 46a508dthe commit re-touched.last-update.json+index.md+quickstart.md+sources/git-repo.md+sources/hackernews.md+sources/index.md+sources/literature.md+sources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/web-search.md+sources/wikijs.md+themes.md— the standard daily-update cycle)307e0382026-09-17 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-17, thirty-fourth consecutive sources-sync)3d95e562026-09-17 — chore: daily update 2026-09-17 (pergit show --stat 3d95e56the commit re-touchedindex.md+quickstart.md+themes.md+sources/hackernews.md+sources/index.md+sources/literature.md+sources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/web-search.md+sources/wikijs.md+themes/05-robin-research.md+themes/index.md+ the.last-update.jsonmetadata file — the standard daily-update cycle)ac467322026-09-16 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-16, thirty-third consecutive sources-sync)73dae5e2026-09-16 — chore: daily update 2026-09-16 (pergit show --stat 73dae5ethe commit re-touched the same source-sync files)f5465f92026-09-15 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-15, thirty-second consecutive sources-sync)
Synthesis-policy — this run (2026-09-19T18:04Z)
- Vault delta: 0 new vault commits + 1 working-tree modification persisting — vault HEAD unchanged at
09bec367for the 8th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption on 2026-09-11T18:14Z. 8 calendar days of vault silence since the 2026-09-11 resumption (the 2026-09-18T18:15Z fetch recorded 7 calendar days; +1 calendar day from 2026-09-18 → 2026-09-19). The same MOC-file modification that surfaced at the 2026-09-13T18:08Z fetch (M "04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md", mtime 2026-09-13 11:55:42 +0800) persists uncommitted for 6 calendar days at this fetch — Robin is editing the MOC index file but the modification has not been promoted to a commit. No new vault mtime changes were observed in the 2026-09-18T18:15Z → 2026-09-19T18:04Z 24-hour window. The 8 untracked regional agent files from 2026-08-07 (per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)") continue to carry forward unchanged:02-Clients/Agents/全国经销商地图-2026-0807.md(1310 bytes) +02-Clients/Agents/华东-2026-0807.md(10030 bytes) +02-Clients/Agents/华北-2026-0807.md(13057 bytes) +02-Clients/Agents/华南-2026-0807.md(10744 bytes) +02-Clients/Agents/山东-2026-0807.md(8592 bytes) +02-Clients/Agents/湖北-2026-0807.md(5766 bytes) +02-Clients/Agents/西北-2026-0807.md(2287 bytes) +02-Clients/Agents/西南-2026-0807.md(2657 bytes) — all dated 2026-08-07 20:24:19 +0800, documented in/sources/distributors-china-2026.md. - Wiki delta: automated maintenance only (1 daily update + 1 sources-sync). The 2 new wiki commits in the 24-hour window are routine:
1ba0fb1sources-sync 2026-09-19 — the thirty-sixth consecutive sources-sync — +6e2a733daily update 2026-09-19 (continuing the count-data wipe pattern that started at the 2026-08-152507925commit). The wiki HEAD bumpc6e81a5→6e2a733covers 1 calendar day. The6e2a733daily update commit re-touched 15 files (the standard cycle) includingthemes/05-robin-research.md+sources/git-repo.md+ all 4 source-sync files; the1ba0fb1sources-sync re-touchedsources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/wikijs.md. - Dirty-file baseline change: 11-dirty baseline (at 2026-09-18T18:15Z) → 5-dirty baseline (at 2026-09-19T18:04Z). The
6e2a733daily update commit cleared the prior 11-dirty-file baseline —index.md+quickstart.md+sources/literature.md+sources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/wikijs.md+sources/README.md+themes/05-robin-research.md+themes/index.md+sources/git-repo.mdwere all staged+committed — then 5 files were re-touched in the working tree by the post-commit synthesis pipeline (likely.last-update.jsonfrom the CLI metadata cycle +sources/hackernews.mdfrom the hackernews-1 connector daily update +sources/web-search.mdfrom the web-search connector daily update +themes.mdfrom the synthesis layer +sources/index.mdfrom the sources index synthesis). The 5-dirty-file list at 2026-09-19T18:04Z:M .last-update.json+M sources/hackernews.md+M sources/index.md+M sources/web-search.md+M themes.md. - Carry-forward bump to 38/33/33/26-day at this fetch (highest carry-forward durations of the 2026-08-07 streak, +1 day from the 2026-09-18 fetch's 37/32/32/25-day):
Review/zhou2023_computer_vision_microfluidics.md37 → 38-day (35 → 36 fetches silent),celvivo_commercial/+templates/32 → 33-day (32 → 33 fetches silent each),deepread_40240593/25 → 26-day (24 → 25 consecutive silent fetches since creation; mtime unchanged at 2026-08-24 16:31 +0800). - Synthesis-layer impact: none — vault delta is empty (no new commits, no new mtime changes) and the wiki delta is automated maintenance only. The MOC-file working-tree modification persists uncommitted for 6 calendar days; it does not affect synthesis-layer pages until the commit lands. No
/themes.mdrow, no/commitments.mdrow, no/open-questions.mdrow, no/personal-logistics.mditem is added at this fetch./quickstart.mdgets a new "Latest update — git-repo-1 (2026-09-19T18:04Z)" paragraph + the description frontmatter mentions the 2026-09-19T18:04Z git-repo-1 fetch + the 35th git-repo-1 fetch of the 2026-08-07 streak + the vault-silent-for-8th-consecutive-fetch event + the 2 new wiki commits (35th/36th sources-sync sequence:1ba0fb1sources-sync thirty-sixth +6e2a733daily update) + the 38/33/33/26-day carry-forward bump + the 5-dirty-file baseline + the MOC-file working-tree modification persisting uncommitted for 6 calendar days + the Robin 8-07 added untracked regional agent files/sources/git-repo.md(this page) — description frontmatter refreshed to mention the 2026-09-19T18:04Z fetch; tags refreshed to add2026-09-19,vault-silent-8d-consecutive-fetch,thirty-sixth-sources-sync-2026-09-19,thirty-fifth-git-repo-fetch-35th,wiki-2-new-commits,moc-organoid-3d-culture-uncommitted-edit-6d,deepread-40240593-twenty-six-silent-fetches,robin-8-07-added-untracked-regional-agent-files; timestamp refreshed to2026-09-19T18:04:00Z; Source-config vault/wiki HEADs refreshed; Latest-manifest section refreshed; Carry-forward table bumped to 38/33/33/26-day; Recent-commits-wiki table refreshed (2 new commits at top); this Synthesis-policy section added; Previous-run section updated/themes/05-robin-research.md— frontmatter description refreshed to mention the 2026-09-19T18:04Z fetch + the vault HEAD unchanged for the 8th consecutive fetch + the 2 new wiki commits (35th/36th sources-sync sequence) + the 38/33/33/26-day carry-forward bump + the MOC-file working-tree modification persisting uncommitted for 6 calendar days; 04-Literature/Deep-Reads/ breakdown table refreshed with the 38/33/33/26-day carry-forward bump/sources/index.md— refreshed the git-repo.md description entry to reflect the 2026-09-19T18:04Z fetch + the vault HEAD unchanged at09bec367for the 8th consecutive fetch + the wiki HEAD6e2a733+ the 38/33/33/26-day carry-forward bump + the 35th git-repo-1 fetch of the 2026-08-07 streak + the 5-dirty-file baseline/sources/README.md— refreshed Active connectors Git repo row + Connector roll Git repo row to mention the 2026-09-19T18:04Z fetch + the thirty-sixth consecutive sources-sync + the 5-dirty-file baseline + the 38/33/33/26-day carry-forward bump
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-19T18:04Z)" paragraph on
/quickstart.mdfor the full delta list.
Synthesis-policy — this run (2026-09-18T18:15Z)
- Vault delta: 0 new vault commits + 1 working-tree modification persisting — vault HEAD unchanged at
09bec367for the 7th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption on 2026-09-11T18:14Z. 7 calendar days of vault silence since the 2026-09-11 resumption (the 2026-09-17T18:22Z fetch recorded 6 calendar days; +1 calendar day from 2026-09-17 → 2026-09-18). The same MOC-file modification that surfaced at the 2026-09-13T18:08Z fetch (M "04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md", mtime 2026-09-13 11:55:42 +0800) persists uncommitted for 5 calendar days at this fetch — Robin is editing the MOC index file but the modification has not been promoted to a commit. No new vault mtime changes were observed in the 2026-09-17T18:22Z → 2026-09-18T18:15Z 24-hour window. The 8 untracked regional agent files from 2026-08-07 (per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)") continue to carry forward unchanged:02-Clients/Agents/全国经销商地图-2026-0807.md(1310 bytes) +02-Clients/Agents/华东-2026-0807.md(10030 bytes) +02-Clients/Agents/华北-2026-0807.md(13057 bytes) +02-Clients/Agents/华南-2026-0807.md(10744 bytes) +02-Clients/Agents/山东-2026-0807.md(8592 bytes) +02-Clients/Agents/湖北-2026-0807.md(5766 bytes) +02-Clients/Agents/西北-2026-0807.md(2287 bytes) +02-Clients/Agents/西南-2026-0807.md(2657 bytes) — all dated 2026-08-07 20:24:19 +0800, documented in/sources/distributors-china-2026.md. - Wiki delta: automated maintenance only (1 daily update + 1 sources-sync). The 2 new wiki commits in the 24-hour window are routine:
46a508ddaily update 2026-09-18 +c6e81a5sources-sync 2026-09-18 — the thirty-fifth consecutive sources-sync (continuing the count-data wipe pattern that started at the 2026-08-152507925commit). The wiki HEAD bump307e038→c6e81a5covers 1 calendar day. - Dirty-file baseline change: 10-dirty baseline (at 2026-09-17T18:22Z) → 11-dirty baseline (at 2026-09-18T18:15Z). The
46a508ddaily update re-touched the same synthesis-layer files;sources/index.mdwas newly re-touched this run (not in the 10-dirty list at 2026-09-17 — likely a re-touch from the synthesis-side write path); thec6e81a5sources-sync re-touched the 4 source-sync files (sources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/wikijs.md);sources/README.mdwas cleared from the dirty list (it had been in the 10-dirty list at 2026-09-17 because the daily update at that fetch re-touched it). The 11-dirty-file list at 2026-09-18T18:15Z:M .last-update.json+M index.md+M quickstart.md+M sources/hackernews.md+M sources/index.md+M sources/literature.md+M sources/nocodb.md+M sources/ragflow.md+M sources/seafile.md+M sources/web-search.md+M sources/wikijs.md+M themes.md. - Carry-forward bump to 37/32/32/25-day at this fetch (highest carry-forward durations of the 2026-08-07 streak, +1 day from the 2026-09-17 fetch's 36/31/31/24-day):
Review/zhou2023_computer_vision_microfluidics.md36 → 37-day (34 → 35 fetches silent),celvivo_commercial/+templates/31 → 32-day (31 → 32 fetches silent each),deepread_40240593/24 → 25-day (23 → 24 consecutive silent fetches since creation; mtime unchanged at 2026-08-24 16:31 +0800). - Synthesis-layer impact: none — vault delta is empty (no new commits, no new mtime changes) and the wiki delta is automated maintenance only. The MOC-file working-tree modification persists uncommitted for 5 calendar days; it does not affect synthesis-layer pages until the commit lands. No
/themes.mdrow, no/commitments.mdrow, no/open-questions.mdrow, no/personal-logistics.mditem is added at this fetch./quickstart.mdgets a new "Latest update — git-repo-1 (2026-09-18T18:15Z)" paragraph + the description frontmatter mentions the 2026-09-18T18:15Z git-repo-1 fetch + the 34th git-repo-1 fetch of the 2026-08-07 streak + the vault-silent-for-7th-consecutive-fetch event + the 2 new wiki commits (34th/35th sources-sync sequence:46a508ddaily update +c6e81a5sources-sync thirty-fifth) + the 37/32/32/25-day carry-forward bump + the 11-dirty-file baseline + the MOC-file working-tree modification persisting uncommitted for 5 calendar days + the Robin 8-07 added untracked regional agent files/sources/git-repo.md(this page) — description frontmatter refreshed to mention the 2026-09-18T18:15Z fetch; tags refreshed to add2026-09-18,vault-silent-9d,thirty-fifth-sources-sync,thirty-fourth-git-repo-fetch,wiki-2-new-commits,moc-organoid-3d-culture-uncommitted-edit-5d,deepread-40240593-twenty-five-silent-fetches,robin-8-07-added-untracked-regional-agent-files; timestamp refreshed to2026-09-18T18:15:00Z; Source-config vault/wiki HEADs refreshed; Latest-manifest section refreshed; Carry-forward table bumped to 37/32/32/25-day; Recent-commits-wiki table refreshed (2 new commits at top); this Synthesis-policy section added; Previous-run section updated/themes/05-robin-research.md— frontmatter description refreshed to mention the 2026-09-18T18:15Z fetch + the vault HEAD unchanged for the 7th consecutive fetch + the 2 new wiki commits (34th/35th sources-sync sequence) + the 37/32/32/25-day carry-forward bump + the MOC-file working-tree modification persisting uncommitted for 5 calendar days; 04-Literature/Deep-Reads/ breakdown table refreshed with the 37/32/32/25-day carry-forward bump/sources/index.md— refreshed the git-repo.md description entry to reflect the 2026-09-18T18:15Z fetch + the vault HEAD unchanged at09bec367for the 7th consecutive fetch + the wiki HEADc6e81a5+ the 37/32/32/25-day carry-forward bump + the 34th git-repo-1 fetch of the 2026-08-07 streak + the 11-dirty-file baseline/sources/README.md— refreshed Active connectors Git repo row + Connector roll Git repo row to mention the 2026-09-18T18:15Z fetch + the thirty-fifth consecutive sources-sync + the 11-dirty-file baseline + the 37/32/32/25-day carry-forward bump
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-18T18:15Z)" paragraph on
/quickstart.mdfor the full delta list.
Synthesis-policy — this run (2026-09-17T18:22Z)
- Vault delta: 0 new vault commits + 1 working-tree modification persisting — vault HEAD unchanged at
09bec367for the 6th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption on 2026-09-11T18:14Z. 6 calendar days of vault silence since the 2026-09-11 resumption (the 2026-09-16T18:18Z fetch recorded 5 calendar days; +1 calendar day from 2026-09-16 → 2026-09-17). The same MOC-file modification that surfaced at the 2026-09-13T18:08Z fetch (M "04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md", mtime 2026-09-13 11:55:42 +0800) persists uncommitted for 4 calendar days at this fetch — Robin is editing the MOC index file but the modification has not been promoted to a commit. No new vault mtime changes were observed in the 2026-09-16T18:18Z → 2026-09-17T18:22Z 24-hour window. The 8 untracked regional agent files from 2026-08-07 (per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)") continue to carry forward unchanged:02-Clients/Agents/全国经销商地图-2026-0807.md(1310 bytes) +02-Clients/Agents/华东-2026-0807.md(10030 bytes) +02-Clients/Agents/华北-2026-0807.md(13057 bytes) +02-Clients/Agents/华南-2026-0807.md(10744 bytes) +02-Clients/Agents/山东-2026-0807.md(8592 bytes) +02-Clients/Agents/湖北-2026-0807.md(5766 bytes) +02-Clients/Agents/西北-2026-0807.md(2287 bytes) +02-Clients/Agents/西南-2026-0807.md(2657 bytes) — all dated 2026-08-07 20:24:19 +0800, documented in/sources/distributors-china-2026.md. - Wiki delta: automated maintenance only (1 daily update + 1 sources-sync). The 2 new wiki commits in the 24-hour window are routine:
3d95e56daily update 2026-09-17 +307e038sources-sync 2026-09-17 — the thirty-fourth consecutive sources-sync (continuing the count-data wipe pattern that started at the 2026-08-152507925commit). The wiki HEAD bumpac46732→307e038covers 1 calendar day. - Dirty-file baseline change: 11-dirty baseline (at 2026-09-16T18:18Z) → 10-dirty baseline (at 2026-09-17T18:22Z). The
3d95e56daily update clearedindex.md+sources/README.mdthat were dirty at the prior fetch;sources/literature.mdwas newly re-touched this run (not previously in the 11-dirty list — likely a re-touch from the synthesis-side write path); the307e038sources-sync re-touched the 4 source-sync files (sources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/wikijs.md). The 10-dirty-file list at 2026-09-17T18:22Z:M .last-update.json+M quickstart.md+M sources/hackernews.md+M sources/literature.md+M sources/nocodb.md+M sources/ragflow.md+M sources/seafile.md+M sources/web-search.md+M sources/wikijs.md+M themes.md. - Carry-forward bump to 36/31/31/24-day at this fetch (highest carry-forward durations of the 2026-08-07 streak, +1 day from the 2026-09-16 fetch's 35/30/30/23-day):
Review/zhou2023_computer_vision_microfluidics.md35 → 36-day (33 → 34 fetches silent),celvivo_commercial/+templates/30 → 31-day (30 → 31 fetches silent each),deepread_40240593/23 → 24-day (22 → 23 consecutive silent fetches since creation; mtime unchanged at 2026-08-24 16:31 +0800). - Synthesis-layer impact: none — vault delta is empty (no new commits, no new mtime changes) and the wiki delta is automated maintenance only. The MOC-file working-tree modification persists uncommitted for 4 calendar days; it does not affect synthesis-layer pages until the commit lands. No
/themes.mdrow, no/commitments.mdrow, no/open-questions.mdrow, no/personal-logistics.mditem is added at this fetch./quickstart.mdgets a new "Latest update — git-repo-1 (2026-09-17T18:22Z)" paragraph + the description frontmatter mentions the 2026-09-17T18:22Z git-repo-1 fetch + the 33rd git-repo-1 fetch of the 2026-08-07 streak + the vault-silent-for-6th-consecutive-fetch event + the 2 new wiki commits (33rd/34th sources-sync sequence:3d95e56daily update +307e038sources-sync thirty-fourth) + the 36/31/31/24-day carry-forward bump + the 10-dirty-file baseline + the MOC-file working-tree modification persisting uncommitted for 4 calendar days + the Robin 8-07 added untracked regional agent files/sources/git-repo.md(this page) — description frontmatter refreshed to mention the 2026-09-17T18:22Z fetch; tags refreshed to add2026-09-17,vault-silent-8d,thirty-fourth-sources-sync,thirty-third-git-repo-fetch,wiki-2-new-commits,moc-organoid-3d-culture-uncommitted-edit-4d,deepread-40240593-twenty-four-silent-fetches,robin-8-07-added-untracked-regional-agent-files; timestamp refreshed to2026-09-17T18:22:00Z; Source-config vault/wiki HEADs refreshed; Latest-manifest section refreshed; Carry-forward table bumped to 36/31/31/24-day; Recent-commits-wiki table refreshed (2 new commits at top); this Synthesis-policy section added; Previous-run section updated/themes/05-robin-research.md— frontmatter description refreshed to mention the 2026-09-17T18:22Z fetch + the vault HEAD unchanged for the 6th consecutive fetch + the 2 new wiki commits (33rd/34th sources-sync sequence) + the 36/31/31/24-day carry-forward bump + the MOC-file working-tree modification persisting uncommitted for 4 calendar days; 04-Literature/Deep-Reads/ breakdown table refreshed with the 36/31/31/24-day carry-forward bump/sources/index.md— refreshed the git-repo.md description entry to reflect the 2026-09-17T18:22Z fetch + the vault HEAD unchanged at09bec367for the 6th consecutive fetch + the wiki HEAD307e038+ the 36/31/31/24-day carry-forward bump + the 33rd git-repo-1 fetch of the 2026-08-07 streak + the 10-dirty-file baseline/sources/README.md— refreshed Active connectors Git repo row + Connector roll Git repo row to mention the 2026-09-17T18:22Z fetch + the thirty-fourth consecutive sources-sync + the 10-dirty-file baseline + the 36/31/31/24-day carry-forward bump
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-17T18:22Z)" paragraph on
/quickstart.mdfor the full delta list.
Synthesis-policy — this run (2026-09-16T18:18Z)
- Vault delta: 0 new vault commits + 1 working-tree modification persisting — vault HEAD unchanged at
09bec367for the 5th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption on 2026-09-11T18:14Z. 5 calendar days of vault silence since the 2026-09-11 resumption. The same MOC-file modification that surfaced at the 2026-09-13T18:08Z fetch (M "04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md", mtime 2026-09-13 11:55:42 +0800) persists uncommitted for 3 calendar days at this fetch — Robin is editing the MOC index file but the modification has not been promoted to a commit. No new vault mtime changes were observed in the 2026-09-13T18:08Z → 2026-09-16T18:18Z 72-hour window. The 8 untracked regional agent files from 2026-08-07 carry forward unchanged. - Wiki delta: automated maintenance only (3 daily updates + 3 sources-syncs). The 6 new wiki commits in the 72-hour window are routine:
667730fdaily update 2026-09-14 +09f47d6sources-sync 2026-09-14 thirty-first +f38cebfdaily update 2026-09-15 +f5465f9sources-sync 2026-09-15 thirty-second +73dae5edaily update 2026-09-16 +ac46732sources-sync 2026-09-16 thirty-third. The wiki HEAD bump5f33bd3→ac46732covers 3 calendar days. - Dirty-file baseline change: 8-dirty baseline (at 2026-09-13T18:08Z) → 11-dirty baseline (at 2026-09-16T18:18Z). The 3 daily-update cycles re-touched
index.md+quickstart.md+themes.md(the 2026-09-13 daily update had cleared them); the 3 sources-syncs re-touched the 4 source-sync files (sources/nocodb.md+sources/ragflow.md+sources/seafile.md+sources/wikijs.md) each cycle. The 11-dirty-file list at 2026-09-16T18:18Z:M .last-update.json+M index.md+M quickstart.md+M sources/README.md+M sources/hackernews.md+M sources/nocodb.md+M sources/ragflow.md+M sources/seafile.md+M sources/web-search.md+M sources/wikijs.md+M themes.md. - Carry-forward bump to 35/30/30/23-day at this fetch (highest carry-forward durations of the 2026-08-07 streak):
Review/zhou2023_computer_vision_microfluidics.md32 → 35-day (33 fetches silent),celvivo_commercial/+templates/27 → 30-day (30 fetches silent each),deepread_40240593/20 → 23-day (22 consecutive silent fetches since creation; mtime unchanged at 2026-08-24 16:31 +0800). - Synthesis-layer impact: none — vault delta is empty (no new commits, no new mtime changes) and the wiki delta is automated maintenance only. The MOC-file working-tree modification persists uncommitted for 3 calendar days; it does not affect synthesis-layer pages until the commit lands. No
/themes.mdrow, no/commitments.mdrow, no/open-questions.mdrow, no/personal-logistics.mditem is added at this fetch./quickstart.mdgets a new "Latest update — git-repo-1 (2026-09-16T18:18Z)" paragraph + the description frontmatter mentions the 2026-09-16T18:18Z git-repo-1 fetch + the 32nd git-repo-1 fetch of the 2026-08-07 streak + the vault-silent-for-5th-consecutive-fetch event + the 6 new wiki commits (31st/32nd/33rd sources-sync sequence) + the 35/30/30/23-day carry-forward bump + the 11-dirty-file baseline + the MOC-file working-tree modification persisting uncommitted for 3 calendar days/sources/git-repo.md(this page) — description frontmatter refreshed to mention the 2026-09-16T18:18Z fetch; tags refreshed to add2026-09-16,2026-09-15,2026-09-14,vault-silent-5d,vault-silent-6d,vault-silent-7d,moc-organoid-3d-culture-uncommitted-edit-3d,vault-working-tree-moc-modification-2026-09-13-persists,thirty-first-sources-sync,thirty-second-sources-sync,thirty-third-sources-sync,thirty-second-git-repo-fetch,wiki-6-new-commits,deepread-40240593-twenty-two-silent-fetches,deepread-40240593-twenty-three-silent-fetches; timestamp refreshed to2026-09-16T18:18:00Z; Source-config vault/wiki HEADs refreshed; Latest-manifest section refreshed; Carry-forward table bumped to 35/30/30/23-day; Recent-commits-wiki table refreshed (6 new commits at top); this Synthesis-policy section added; Previous-run section updated/themes/05-robin-research.md— frontmatter description refreshed to mention the 2026-09-16T18:18Z fetch + the vault HEAD unchanged for the 5th consecutive fetch + the 6 new wiki commits (31st/32nd/33rd sources-sync sequence) + the 35/30/30/23-day carry-forward bump + the MOC-file working-tree modification persisting uncommitted; 04-Literature/Deep-Reads/ breakdown table refreshed with the 35/30/30/23-day carry-forward bump/sources/index.md— refreshed the git-repo.md description entry to reflect the 2026-09-16T18:18Z fetch + the vault HEAD unchanged at09bec367for the 5th consecutive fetch + the wiki HEADac46732+ the 35/30/30/23-day carry-forward bump + the 32nd git-repo-1 fetch of the 2026-08-07 streak + the 11-dirty-file baseline/sources/README.md— refreshed Active connectors Git repo row + Connector roll Git repo row to mention the 2026-09-16T18:18Z fetch + the thirty-third consecutive sources-sync + the 11-dirty-file baseline + the 35/30/30/23-day carry-forward bump
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-16T18:18Z)" paragraph on
/quickstart.mdfor the full delta list.
Synthesis-policy — this run (2026-09-13T18:08Z)
- Vault delta: 0 new vault commits + 1 working-tree modification — vault HEAD unchanged at
09bec367(the 2nd consecutive vault-silent fetch after the Tomas 2026 + Vijakumaran 2026 resumption). The only vault change is the MOC-file edit:M "04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md"(mtime 2026-09-13 11:55:42 +0800) — Robin is actively editing the MOC index file but has not yet committed. This is the first vault working-tree modification since the 2026-08-24/25 burst (the 2026-08-31 cluster was an in-vault commit, not an uncommitted edit), and it routes through the MOC-folder rather than thedeepread_<slug>/working-folder pipeline that the 2026-08-24/25 burst had hypothesized. Thedeepread_40240593/working folder is still silent (mtime unchanged across 19 consecutive silent fetches since the 2026-08-24 16:31 +0800 baseline). - Wiki delta: automated maintenance only (CLI metadata cycle + sources-sync + daily update + sources-sync). The 4 new wiki commits in the 48-hour window are routine: 2 daily updates (
999a37d+0447186) + 2 sources-syncs (7cfb801twenty-ninth +5f33bd3thirtieth). The wiki HEAD bump55d930f→5f33bd3covers 2 calendar days. - Dirty-file baseline change: 10-dirty baseline (at 2026-09-11T18:14Z) → 8-dirty baseline (at 2026-09-13T18:08Z). Different shape:
index.md+quickstart.md+sources/git-repo.md+themes.mdwere cleared by the999a37ddaily update; newM sources/openwiki-version-drift.mdappeared. The 8-dirty-file list at 2026-09-13T18:08Z:M .last-update.json+M sources/hackernews.md+M sources/nocodb.md+M sources/openwiki-version-drift.md+M sources/ragflow.md+M sources/seafile.md+M sources/web-search.md+M sources/wikijs.md. - Synthesis-layer impact: none — vault delta is empty (no new commits, no new mtime changes that alter the synthesis-layer shape) and the wiki delta is automated maintenance only. The MOC-file working-tree edit is uncommitted; it does not affect synthesis-layer pages until the commit lands. No
/themes.mdrow, no/commitments.mdrow, no/open-questions.mdrow, no/personal-logistics.mditem is added at this fetch./quickstart.mdgets a new "Latest update — git-repo-1 (2026-09-13T18:08Z)" paragraph + the description frontmatter mentions the 2026-09-13T18:08Z git-repo-1 fetch + the vault-unchanged state + the 4 new wiki commits (28th/29th/30th sources-sync sequence) + the 32/27/27/20-day carry-forward bump + the 8-dirty-file baseline + the MOC-file working-tree modification/sources/git-repo.md(this page) — description frontmatter refreshed to mention the 2026-09-13T18:08Z fetch; tags refreshed to add2026-09-13,2026-09-12,twenty-ninth-sources-sync,thirtieth-sources-sync,thirtieth-git-repo-fetch,thirty-first-git-repo-fetch,deepread-40240593-twenty-silent-fetches,moc-organoid-3d-culture-uncommitted-edits,vault-working-tree-moc-modification-2026-09-13; timestamp refreshed to2026-09-13T18:08:00Z; Source-config vault/wiki HEADs refreshed; Latest-manifest section refreshed; Carry-forward table bumped to 32/27/27/20-day; Recent-commits-wiki table refreshed (4 new commits at top); this Synthesis-policy section added; Previous-run section updated/themes/05-robin-research.md— frontmatter description refreshed to mention the 2026-09-13T18:08Z fetch + the vault HEAD unchanged + the 4 new wiki commits + the 32/27/27/20-day carry-forward bump + the MOC-file working-tree modification; 04-Literature/Deep-Reads/ breakdown table refreshed with the 32/27/27/20-day carry-forward bump/sources/index.md— refreshed the git-repo.md description entry to reflect the 2026-09-13T18:08Z fetch + the vault HEAD unchanged + the 4 new wiki commits (28th/29th/30th sources-sync) + the 32/27/27/20-day carry-forward bump + the 31st git-repo-1 fetch of the 2026-08-07 streak + the 8-dirty-file baseline/sources/README.md— refreshed Active connectors Git repo row + Connector roll Git repo row to mention the 2026-09-13T18:08Z fetch + the thirtieth consecutive sources-sync + the 8-dirty-file baseline + the 32/27/27/20-day carry-forward bump
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-13T18:08Z)" paragraph on
/quickstart.mdfor the full delta list.
Synthesis-policy — this run (2026-09-11T18:14Z)
- Vault delta: 2 new vault commits (Tomas 2026 + Vijakumaran 2026) — vault silence streak BROKEN after 11 calendar days since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster. Both new papers route through the standard
04-Literature/Deep-Reads/<application-domain>/<DOI>.mdpattern. The v4 Flywheel auto-sink pipeline (visible in the09bec367commit message "飞轮 v4 自动 sink") is the first observation of Robin's LDR pipeline v4 in action — the v3 SOP was 9 steps (per the 2026-08-259aa2af4cvendor-mapping retrofit); the v4 auto-sink iterates the SOP with an automated commit/sink step. - Wiki delta: automated maintenance only (CLI metadata cycle + sources-sync + daily update + sources-sync). The 4 new wiki commits are routine: 2 daily updates + 2 sources-syncs (the standard cadence).
- Synthesis-layer impact:
- Vault silence streak BROKEN — flips the narrative from "11 calendar days of vault silence" to "vault resumed after 11-day pause" + "2 new vault commits since the 2026-08-31 cluster" + "v4 Flywheel auto-sink pipeline first observation"
/sources/literature.mdgets a new2026-09-11 (Vijakumaran 2026 brain-organoid ALI oxygen engineering — first v4 Flywheel auto-sink entry)row; the Tomas 2026 entry was added in a prior run (2026-09-10 row already present)/themes.mdclass-organoid-3d-bioprintingrow gets Last-seen refresh2026-08-25→2026-09-11+ Evidence count bump37+→39+(Tomas 2026 + Vijakumaran 2026 = 2 new entries)/themes/05-robin-research.mdvault-snapshot metadata refreshed + 04-Literature/Deep-Reads/ breakdown table updated with Vijakumaran 2026 row + the 4 carry-forward untracked directories bumped to 30/25/25/18-day carry-forward/quickstart.mdgets a new "Latest update — git-repo-1 (2026-09-11T18:14Z)" paragraph + the description frontmatter mentions the 2026-09-11T18:14Z git-repo-1 fetch + the vault silence streak broken + the 2 new vault commits + the 4 new wiki commits + the 30/25/25/18-day carry-forward bump/sources/index.md+/sources/README.mdget their git-repo.md description entries refreshed
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-11T18:14Z)" paragraph on
/quickstart.mdfor the full delta list.
Previous run
- 2026-09-18T18:15Z — vault HEAD unchanged at
09bec367for the 7th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption, 0 new vault commits + 1 working-tree modification atMOCs/MOC-类器官与3D培养.md(mtime 2026-09-13 11:55:42 +0800, persists uncommitted for 5 calendar days at this fetch), 2 new wiki commits (46a508ddaily update 2026-09-18 +c6e81a5sources-sync 2026-09-18 — the thirty-fifth consecutive sources-sync), 11-dirty-file baseline (up from 10-dirty at the 2026-09-17 fetch), carry-forward bump to 37/32/32/25-day. See the "Synthesis-policy — this run (2026-09-18T18:15Z)" section above + the "Latest update — git-repo-1 (2026-09-18T18:15Z)" paragraph on/quickstart.mdfor the full synthesis of that run. - 2026-09-17T18:22Z — vault HEAD unchanged at
09bec367for the 6th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption, 0 new vault commits + 1 working-tree modification atMOCs/MOC-类器官与3D培养.md(mtime 2026-09-13 11:55:42 +0800, persists uncommitted for 4 calendar days at this fetch), 2 new wiki commits (3d95e56daily update 2026-09-17 +307e038sources-sync 2026-09-17 — the thirty-fourth consecutive sources-sync), 10-dirty-file baseline (down from 11-dirty at the 2026-09-16 fetch), carry-forward bump to 36/31/31/24-day. See the "Synthesis-policy — this run (2026-09-17T18:22Z)" section above + the "Latest update — git-repo-1 (2026-09-17T18:22Z)" paragraph on/quickstart.mdfor the full synthesis of that run. - 2026-09-16T18:18Z — vault HEAD unchanged at
09bec367for the 5th consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption, 0 new vault commits + 1 working-tree modification atMOCs/MOC-类器官与3D培养.md(mtime 2026-09-13 11:55:42 +0800, persists uncommitted for 3 calendar days at this fetch), 6 new wiki commits (667730fdaily update 2026-09-14 +09f47d6sources-sync 2026-09-14 — the thirty-first consecutive sources-sync +f38cebfdaily update 2026-09-15 +f5465f9sources-sync 2026-09-15 — the thirty-second consecutive sources-sync +73dae5edaily update 2026-09-16 +ac46732sources-sync 2026-09-16 — the thirty-third consecutive sources-sync), 11-dirty-file baseline (up from 8-dirty at the 2026-09-13 fetch), carry-forward bump to 35/30/30/23-day. See the "Synthesis-policy — this run (2026-09-16T18:18Z)" section above + the "Latest update — git-repo-1 (2026-09-16T18:18Z)" paragraph on/quickstart.mdfor the full synthesis of that run. - 2026-09-13T18:08Z — vault HEAD unchanged at
09bec367for the 2nd consecutive fetch after the Tomas 2026 + Vijakumaran 2026 resumption, 0 new vault commits + 1 working-tree modification atMOCs/MOC-类器官与3D培养.md(mtime 2026-09-13 11:55:42 +0800), 4 new wiki commits (7cfb801sources-sync 2026-09-12 — the twenty-ninth consecutive sources-sync +999a37ddaily update 2026-09-12 +0447186daily update 2026-09-13 +5f33bd3sources-sync 2026-09-13 — the thirtieth consecutive sources-sync), 8-dirty-file baseline (down from 10-dirty at the 2026-09-11 fetch), carry-forward bump to 32/27/27/20-day. See the "Synthesis-policy — this run (2026-09-13T18:08Z)" section above + the "Latest update — git-repo-1 (2026-09-13T18:08Z)" paragraph on/quickstart.mdfor the full synthesis of that run. - 2026-09-11T18:14Z — vault HEAD bumped
391e4713→09bec367(vault silence streak BROKEN after 11 calendar days), 2 new vault commits (1fd63019Tomas 2026 HGSC +09bec367Vijakumaran 2026 brain-organoid ALI oxygen engineering — first v4 Flywheel auto-sink entry), 4 new wiki commits (299eeabsources-sync 2026-09-10 twenty-seventh +1e6a7cbdaily update 2026-09-10 +2bf104edaily update 2026-09-11 +55d930fsources-sync 2026-09-11 twenty-eighth), 10-dirty-file baseline, 4 carry-forward untracked directories bumped to 30/25/25/18-day, 1 new untrackedNOfile. See the "Synthesis-policy — this run (2026-09-11T18:14Z)" section above + the "Latest update — git-repo-1 (2026-09-11T18:14Z)" paragraph on/quickstart.mdfor the full synthesis of that run. - 2026-09-09T18:11Z — vault HEAD unchanged at
391e4713, 2 new wiki commits (f7450e9+7e2072c— the twenty-sixth consecutive sources-sync), 10-dirty-file baseline, the 4 carry-forward untracked directories bumped to 29/24/24/17-day carry-forward. See/themes/05-robin-research.md+/quickstart.mdfor the full synthesis of that run. - 2026-09-10T18:19Z — manifest written by a prior ingestion cycle but no corresponding wiki update (the wiki HEAD was still
299eeabat the 2026-09-10T18:19Z manifest timestamp, between the7e2072c2026-09-09 sources-sync and the1e6a7cb2026-09-10 daily update). The 2026-09-10T18:19Z manifest observed the same vault HEAD391e4713(vault still silent at that timestamp).