---
type: "Reference"
title: "Git repo — evidence index (Obsidian vault + OpenWiki wiki, Robin)"
description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD `391e4713`, 2026-09-09, **vault HEAD unchanged** at the 2026-08-31T18:09Z fetch level for the 9th consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster, **0 new vault commits** in the 2026-09-08T18:07Z → 2026-09-09T18:11Z 24-hour window, **9 calendar days of vault silence** since the 2026-08-31 cluster (Yan + Stewart + Nguyen + Aiello + Miao all `obsidian-vault/04-Literature/Deep-Reads/CelVivo/`) remains the most recent committed vault activity); carry-forward untracked-file set bumps: `Review/zhou2023_computer_vision_microfluidics.md` 28 → **29-day carry-forward** (26 → **27 fetches silent**, stale carry-forward note per 2026-08-28 demotion), `celvivo_commercial/` + `templates/` 23 → **24-day carry-forward** (both confirmed one-off alongside `Review/` at the 2026-08-28 fetch, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 + 2026-09-03 + 2026-09-04 + 2026-09-05 + 2026-09-06 + 2026-09-07 + 2026-09-08 + **2026-09-09** fetches), `deepread_40240593/` 16 → **17-day carry-forward** (mtime unchanged across **16 consecutive silent fetches** since creation, working-folder pipeline hypothesis continuing to weaken); and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD `7e2072cef52a842ccde9daab27ad82699c9e127c`, 2026-09-09, **2 new automated wiki commits in the 2026-09-08T18:07Z → 2026-09-09T18:11Z 24-hour window: `7e2072c` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-09 — the **twenty-sixth** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `556d937` 2026-09-08 + `56aeb69` 2026-09-07 + `0f8555e` 2026-09-06 + `0be3b8a` 2026-09-05 + `88635ed` 2026-09-04 + `58168e7` 2026-09-03 + `cedbb7f` 2026-09-02 + `0890fdb` 2026-09-01 + `9582dea` 2026-08-31 + `d56da3a` 2026-08-30 + `37d1ba6` 2026-08-29 + `c992dd6` 2026-08-28 + `502281f` 2026-08-27 + `ebb95c0` 2026-08-26 + `1003b92` 2026-08-25 + `127c2dc` 2026-08-24 + `8f8f767` 2026-08-23 + `43d4548` 2026-08-22 + `f6c2576` 2026-08-21 + `bd30339` 2026-08-20 + `dcb53a2` 2026-08-19 + `1fc73ae` 2026-08-18 + `be49285` 2026-08-17 + `997b648` 2026-08-16 + `2507925` 2026-08-15) committed `sources/{nocodb,ragflow,seafile,wikijs}.md` re-touched by the sources-sync, then `f7450e9` chore: daily update 2026-09-09 (per `git show --stat f7450e9` the commit touched 16 files including `.last-update.json` + `index.md` + `quickstart.md` + `sources/README.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md` + `themes.md` + `themes/05-robin-research.md` + `themes/index.md` + one more file); the very next synthesis edits from the HN-1 2026-09-09 (next pull after the 2026-09-08 18:00 UTC pull — the 2026-09-09T18:11Z fetch is the git-repo-1 slot in the daily update cycle) + web-search-1 2026-09-09 (skipped) + this git-repo-1 2026-09-09T18:11Z run re-touched files leaving the dirty count at **10 per the manifest `changedFiles` list** — `M .last-update.json` + `M open-questions.md` + `M sources/hackernews.md` + `M sources/index.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes.md` — **same shape as the 2026-09-08T18:07Z fetch (10-dirty-file baseline)** because the `7e2072c` sources-sync on 2026-09-09 re-touched the 4 source-sync files (`sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md`) that the `f7450e9` daily update had cleared via commit, plus the CLI metadata cycle re-touched `open-questions.md` + `sources/index.md` (replacing `quickstart.md` + `index.md` from the 2026-09-08 metadata cycle) + `.last-update.json` + `sources/hackernews.md` + `sources/web-search.md` + `themes.md` (4 metadata-cycle files that carried over from the 2026-09-08 cycle); the 10-dirty-file list does not include `quickstart.md` + `index.md` (the `f7450e9` daily update on 2026-09-09 re-touched them and cleared them via commit) or `sources/git-repo.md` + `sources/README.md` + `sources/literature.md` + `themes/05-robin-research.md` + `themes/index.md` (the `f7450e9` daily update on 2026-09-09 re-touched them and cleared them via commit) or `commitments.md` + `sources/openwiki-version-drift.md` (not re-touched by either the daily update or the CLI metadata cycle at this fetch)**. This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
tags: [sources, git-repo, vault, wiki, manifest, 2026-09-09, 2026-09-08, 2026-09-07, 2026-09-06, 2026-09-05, 2026-09-04, 2026-09-03, 2026-09-02, 2026-09-01, 2026-08-31, vault-silent-9d, twenty-sixth-sources-sync, review-templates-celvivo-commercial-confirmed-one-off, deepread-40240593-seventeen-silent-fetches]
timestamp: 2026-09-09T18:11:00Z
---

# Git repo — evidence index

This page is the **compact source-evidence index** for the local git-repo connector, which ingests Robin's Obsidian vault (`/home/ldw/workspace`) and the local OpenWiki wiki (`/home/ldw/.openwiki/wiki`). Each ingestion run writes a JSON manifest under `~/.openwiki/connectors/git-repo/raw/`.

## Source config

- Connector config path: `~/.openwiki/connectors/git-repo/config.json`
- Two configured local repos:
  - `obsidian-vault` at `/home/ldw/workspace` (branch: `main`, HEAD `391e4713`, 2026-08-31 — 35 commits since 2026-08-03 fetch)
  - `openwiki-wiki` at `/home/ldw/.openwiki/wiki` (branch: `main`, HEAD `7e2072c`, 2026-09-09)
- Authentication: local path only — no remote, no credentials

## Latest manifest

- `~/.openwiki/connectors/git-repo/raw/2026-09-09T18-11-48-700Z/manifest.json` (generated 2026-09-09T18:11:48Z)
- Vault HEAD: `391e47131679ce9edf0f525236e78ebb13e0d232` (unchanged since 2026-08-31T13:42 +0800)
- Wiki HEAD: `7e2072cef52a842ccde9daab27ad82699c9e127c` (bumped from `556d937` at 2026-09-09)
- **0 new vault commits** in the 24-hour window (vault silent for the 9th consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster)
- **2 new automated wiki commits** in the 24-hour window (`7e2072c` sources-sync 2026-09-09 — the **twenty-sixth** consecutive sources-sync + `f7450e9` daily update 2026-09-09)
- **10 uncommitted wiki files** in working tree per the manifest `changedFiles` list (same shape as the 2026-09-08T18:07Z fetch — the `f7450e9` daily update cleared `quickstart.md` + `index.md` + `sources/{git-repo,README,literature}.md` + `themes/05-robin-research.md` + `themes/index.md` via commit, but the `7e2072c` sources-sync on 2026-09-09 re-touched the 4 source-sync files `sources/{nocodb,ragflow,seafile,wikijs}.md` that the daily update had cleared — leaving those 4 + the 4 CLI metadata-cycle files `.last-update.json` + `open-questions.md` + `sources/hackernews.md` + `sources/web-search.md` + `sources/index.md` + `themes.md` still dirty after the synthesis edits = **10-dirty-file baseline, same shape as 2026-09-08T18:07Z fetch** — `open-questions.md` + `sources/index.md` replaced `quickstart.md` + `index.md` from the 2026-09-08 metadata cycle, all other entries carry forward unchanged)

## Carry-forward untracked directories

| Directory / file | Carry-forward | Fetches silent | Status |
| --- | ---: | ---: | --- |
| `Review/zhou2023_computer_vision_microfluidics.md` | **29-day** | 27 | stale carry-forward note (confirmed one-off at 2026-08-27 fetch, demoted at 2026-08-28 fetch) |
| `celvivo_commercial/` | **24-day** | 24 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
| `templates/` | **24-day** | 24 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
| `deepread_40240593/` | **17-day** | 16 | working-folder pipeline hypothesis continuing to weaken (mtime unchanged across 16 consecutive silent fetches since creation) |

## Robin 8-07 added — untracked regional agent files (context only)

The 8 untracked regional agent files Robin added on 2026-08-07 (per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)") remain in the vault working tree as uncommitted artifacts, with no mtime change observed since the 2026-08-07 baseline:

- `02-Clients/Agents/全国经销商地图-2026-0807.md`
- `02-Clients/Agents/华东-2026-0807.md`
- `02-Clients/Agents/华北-2026-0807.md`
- `02-Clients/Agents/华南-2026-0807.md`
- `02-Clients/Agents/山东-2026-0807.md`
- `02-Clients/Agents/湖北-2026-0807.md`
- `02-Clients/Agents/西北-2026-0807.md`
- `02-Clients/Agents/西南-2026-0807.md`

These files are documented in [`/sources/distributors-china-2026.md`](/sources/distributors-china-2026.md) (with privacy rules per [`/sources/agents.md`](/sources/agents.md)) — no fresh synthesis update needed at this fetch.

## Recent commits — vault (last 5)

The most recent vault commits remain the 2026-08-31 THIRD consecutive single-day 5-paper CelVivo LDR burst (no new commits in the 24-hour window):

1. `391e4713` 2026-08-31 — deep-read: Yan 2024 Cell Reports TMEM106B SARS-CoV-2 ACE2-independent brain organoids (CelVivo)
2. `4fca0123` 2026-08-31 — deep-read: Miao 2025 Cell vascularized lung/gut organoids (CelVivo ClinoReactor)
3. `fad7e21e` 2026-08-31 — deep-read: Nguyen 2024 npj Viruses JEV G4 2022 Australia brain organoids (CelVivo)
4. `030f31ed` 2026-08-31 — deep-read: Aiello 2025 EMBO reports reproducible brain organoids (CelVivo ClinoReactor)
5. `eb24ab72` 2026-08-31 — deep-read: Stewart 2023 Front Microbiol BA.5/XBB neurotropic brain organoids (CelVivo)

## Recent commits — wiki (last 5)

1. `f7450e9` 2026-09-09 — chore: daily update 2026-09-09 (16 files modified per `git show --stat f7450e9`)
2. `7e2072c` 2026-09-09 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-09, **twenty-sixth** consecutive sources-sync)
3. `57be545` 2026-09-08 — chore: daily update 2026-09-08 (10 files modified per `git show --stat 57be545`)
4. `556d937` 2026-09-08 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-08, **twenty-fifth** consecutive sources-sync)
5. `3e04ce7` 2026-09-07 — chore: daily update 2026-09-07 (16 files modified per `git show --stat 3e04ce7`)

## Synthesis-policy — this run

- Vault delta: empty (no new commits, no new mtime changes; the 8 Robin-8-07 regional agent files carry forward unchanged).
- Wiki delta: automated maintenance only (CLI metadata cycle + sources-sync + daily update).
- Synthesis-layer impact: **none**. The themes / commitments / open-questions / personal-logistics pages are independent of the wiki-side automated maintenance commits.
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-09T18:11Z)" paragraph on `/quickstart.md` for the full delta list.

## Previous run

- 2026-09-08T18:07Z — vault HEAD unchanged at `391e4713`, 2 new wiki commits (`556d937` + `57be545` — the **twenty-fifth** consecutive sources-sync), 10-dirty-file baseline (up from 4), the 4 carry-forward untracked directories bumped to 28/23/23/16-day carry-forward. See [`/themes/05-robin-research.md`](/themes/05-robin-research.md) + `/quickstart.md` for the full synthesis of that run.