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chore: daily update 2026-08-21

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OpenWiki Bot committed 2026-08-21 02:27:31 +08:00
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.last-update.json
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{ {
"updatedAt": "2026-08-19T18:15:52.460Z", "updatedAt": "2026-08-20T18:27:31.629Z",
"command": "update", "command": "update",
"model": "MiniMax-M3", "model": "MiniMax-M3",
"status": "complete", "status": "complete",
quickstart.md
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## Current status ## Current status
- **Wiki state:** initialized — Hacker News, the local Obsidian vault, and Tavily web search are active and feeding `/sources/hackernews.md`, `/sources/git-repo.md`, `/sources/web-search.md`, and `/themes.md`. All 5 synthesis themes (`/themes/01-organoid-equipment.md`, `/themes/02-bioprinting.md`, `/themes/03-ai-agents.md`, `/themes/04-local-llm.md`, `/themes/05-robin-research.md`) are now generated; the 2026-08-17 daily update created `/sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor); the 2026-08-19 daily update committed the synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs but the wiki HEAD bumped to `dcb53a2` and the 10 uncommitted synthesis-layer edits re-appear because the very next synthesis edits from this git-repo-1 2026-08-19T18:08Z run re-touch the same files (`sources/index.md` re-appeared as dirty in the working tree at this fetch after being committed by `151d22b` 2026-08-16). - **Wiki state:** initialized — Hacker News, the local Obsidian vault, and Tavily web search are active and feeding `/sources/hackernews.md`, `/sources/git-repo.md`, `/sources/web-search.md`, and `/themes.md`. All 5 synthesis themes (`/themes/01-organoid-equipment.md`, `/themes/02-bioprinting.md`, `/themes/03-ai-agents.md`, `/themes/04-local-llm.md`, `/themes/05-robin-research.md`) are now generated; the 2026-08-17 daily update created `/sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor); the 2026-08-20 daily update committed the synthesis-layer edits from the prior HN-1 2026-08-20T18:00Z + web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z runs but the wiki HEAD bumped to `bd30339` and the 10 uncommitted synthesis-layer edits re-appear because the very next synthesis edits from this git-repo-1 2026-08-20T18:09Z run re-touch the same files (`sources/index.md` re-appeared as dirty in the working tree at this fetch after being committed by `151d22b` 2026-08-16).
- **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 web-search update attempts were skipped because the connector is not enabled and `TAVILY_API_KEY` is empty; the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below. - **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 web-search update attempts were skipped because the connector is not enabled and `TAVILY_API_KEY` is empty; the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below.
**Latest update — git-repo-1 (2026-08-20T18:09Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-20T18-09-15-122Z/manifest.json`. **Vault HEAD unchanged** at `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (same as the 2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z + 2026-08-20T18:09Z fetches — **vault is silent for the 4th consecutive fetch**, **4 calendar days stale** since the last vault HEAD bump on 2026-08-16) — **0 new vault commits** in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window; the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most recent vault activity. **0 new vault mtime changes** — the 25+ untracked vault files + 2 untracked dirs from the 2026-08-17T18:09Z fetch carry forward unchanged (including `celvivo_commercial/1331651_20260630_131201.pdf` last touched 2026-08-17 15:04 +0800 = 07:04 UTC, **before** the 24h window + `templates/类器官IRB申请清单.md` last touched 2026-08-16 10:27 +0800 = 02:27 UTC, well before the window + the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-new-`Review/`-subfolder file at **9-day carry-forward** since 2026-08-11 (mtime `2026-08-11 16:31:54 +0800`), uncommitted since then, **7 fetches silent** on the file). **Wiki HEAD** bumped from `dcb53a2873d37b6396de682d658433c2ea85b376` (2026-08-19T18:08Z fetch) to **`bd30339182707c42328c2920a7d744eb360df618`** (2026-08-20T02:30 +0800, the 2026-08-20 sources-sync); **2 new automated wiki commits** in the 24-hour window: `a44f284` chore: daily update 2026-08-20 (2026-08-20T02:23 +0800) + `bd30339` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-20, 2026-08-20T02:30 +0800 — the **sixth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + now `bd30339` 2026-08-20). Both commits are routine auto-orchestration: (a) `a44f284` carried the synthesis-layer edits from the prior HN-1 2026-08-20T18:00Z + web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z runs; (b) `bd30339` re-applied the count-data wipe pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the sixth consecutive time. **10 uncommitted wiki files** in working tree (re-appearing because the very next synthesis edits from this git-repo-1 2026-08-20T18:09Z run re-touch the same files): `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/index.md` (re-appeared as dirty in the working tree at this fetch — was committed by `151d22b` 2026-08-16 daily update, then re-touched by subsequent HN-1 + git-repo-1 synthesis edits) + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`. Wiki edits this run: (a) `/sources/git-repo.md` — refreshed frontmatter HEAD pointers (vault HEAD unchanged at `a4fa5a32`, wiki HEAD `dcb53a2` → `bd30339`, tags + `2026-08-20`, timestamp → `2026-08-20T18:09:15Z`), refreshed the Connector / State section to the new `2026-08-20T18-09-15-122Z` raw manifest, refreshed the obsidian-vault working-tree-status section to 2026-08-20 (0 new commits, 0 new mtime changes, untracked set unchanged; `Review/` 8-day → **9-day carry-forward** + `templates/` + `celvivo_commercial/` 3-day → **4-day carry-forward**), refreshed the openwiki-wiki working-tree-status section to 2026-08-20 (2 new automated wiki commits + the carry-forward 10 uncommitted synthesis-layer edits), added 2 new entries at the top of the Recent-commits-for-wiki table (`bd30339` sources-sync 2026-08-20 + `a44f284` daily update 2026-08-20), refreshed the Summary-of-last-48-hours table to add the 2026-08-19T18:08Z → 2026-08-20T18:09Z window data (0 vault commits / 2 wiki commits / operational row noting the **sixth** consecutive sources-sync re-applying the count-data wipe pattern), refreshed the Notable-entity section to bump the `Review/` subfolder entry from 8-day to **9-day carry-forward** at the 2026-08-20 fetch (was 8-day at 2026-08-19) + bumped the `templates/` + `celvivo_commercial/` entries from 3-day to **4-day carry-forward**; refreshed the Synthesis-policy section with this run's delta summary; (b) `/themes/05-robin-research.md` — vault-snapshot metadata refreshed (fetch timestamp → `2026-08-20T18:09:15Z`, raw-manifest path → the new `2026-08-20T18-09-15-122Z` manifest, HEAD unchanged at `a4fa5a32`, `Review/` subfolder entry bumped to **9-day carry-forward** + the `Templates/` + `CelVivo-commercial/` entries bumped to **4-day carry-forward**); (c) `/quickstart.md` — added this "LateLine truncated
**Latest update — web-search-1 attempted 2026-08-20 skipped.** One source-specific update run for `web-search-1` (Web Search / Tavily) per the source-specific instruction "Track CelVivo / 3Brain / Cellink / organoid news from web (NOTE: needs TAVILY_API_KEY, currently empty)". The deterministic pull was **skipped**: `web-search-1` is not enabled in the runtime registry and `TAVILY_API_KEY` is empty, so no Tavily request was made and no raw data files were written. The nightly searxng-fallback slot `~/.openwiki/connectors/web-search/raw/2026-08-19T18-35-03-searxng-fallback/` is also empty — no web-search evidence of any kind landed in the 24-hour window. This is the **eighth consecutive skip** on the same code path (after 2026-08-08 + 2026-08-10 + 2026-08-12 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19); the latest successful Tavily pull remains 2026-08-03 18:08 UTC. No new CelVivo / 3Brain / Cellink / organoid findings were available for synthesis; no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. Discord between on-disk `~/.openwiki/connectors/web-search/config.json` (which shows `enabled: true` + 6 Chinese queries) and the runtime registry (still reports the connector as disabled) is the same operational issue noted on the 2026-08-08 / 2026-08-10 / 2026-08-12 / 2026-08-15 / 2026-08-17 / 2026-08-18 / 2026-08-19 runs — recorded for traceability only, not a wiki-synthesis concern. Wiki edits this run: (a) `/sources/web-search.md` — added a "2026-08-20 attempted update — skipped" section ahead of the 2026-08-19 entry, following the established 5-field structure (Status / Authentication / Coverage / Synthesis / Operational note); updated the header line to mention the eighth skip; refreshed the 2026-08-19 entry's "Operational note" to mention the 2026-08-20 follow-up; refreshed the 2026-08-18 entry's "Operational note" to mention the 2026-08-19 + 2026-08-20 follow-ups; refreshed the 2026-08-17 entry's "Operational note" to mention the 2026-08-18 + 2026-08-19 + 2026-08-20 follow-ups; refreshed the 2026-08-15 entry's "Operational note" to mention the 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 follow-ups; added `2026-08-20` to the `tags` list; (b) `/sources/README.md` — refreshed Active connectors table + Connector roll table to reflect the 8-entry skip streak; (c) `/quickstart.md` — added this "Latest update — web-search-1 attempted 2026-08-20 skipped" paragraph; updated the Web Search connector row in "Current status" and "Adding sources" to reflect the 8-entry skip streak; updated the Backlog web-search entry likewise. **No new theme row, no commitment row, no open-question row, no personal-logistics item** — the synthesis layer is unchanged because the connector produced no new evidence. Prior run was **hackernews-1 update (2026-08-20T18:00Z)** — see next paragraph.
**Latest update — hackernews-1 (2026-08-20T18:00Z).** One source-specific update run for `hackernews-1` (Hacker News — LLM-agent topic set) per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=hackernews` and wrote raw data at `~/.openwiki/connectors/hackernews/raw/2026-08-20T18-00-02-455Z/hackernews-results.json`. 2 feeds (`top` 30 IDs / 23 resolved + `best` 30 IDs / 8 resolved) → **28 unique items** (3 overlap: `49372583` AliExpress WebAudio fingerprinting, `49373456` Show HN 125M piano autocomplete, `49371006` Windows Rorschach). 6 search queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`) returned **zero vendor-anchored hits** — `CelVivo`/`openwiki`/`deepagents` returned `nbHits=0`; `Cellink` returned 4 substring-noise hits; `organoid` returned 7 hits (1 thematic + 6 "organi-" substring noise); `3Brain` returned 10 hits (1 thematic + 9 "brain"-substring noise). The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 + 2026-08-19 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-20 pull reverts to noise-only on the 4 vendor queries **but with two application-domain thematic hits** — `49366519` organoid + `49373812` miniature-brains — **the first pull in the 9-pull streak to surface a thematic on the `organoid`/`3Brain` Algolia lanes since the 2026-08-12 `49266068` Wired feature**); Tavily (web-search) remains the productive lane for vendor news. **One thematic hit → `class-organoid-3d-bioprinting` Last-seen refresh 2026-08-12 → 2026-08-20** — **`49366519` "Human brain organoids record the passage of time over multiple years"** (18 pts, 1 cmt, top, by `sbulaev` 2026-08-19 20:07, https://www.nature.com/articles/s41586-026-10877-x — Nature 2026 paper) records that human brain organoids maintained in long-term culture develop signatures of multi-year temporal processing — directly relevant to CelVivo ClinoReactor's long-term stable organoid culture value proposition + to the `class-organoid-3d-bioprinting` row's neuroscience-in-vitro application-domain branch; cross-walked under `49373812` "Scientists Have Built Miniature Brains That Experience the Passage of Time" (2 pts top, by `geox`, https://www.sciencealert.com/unprecedented-scientists-have-built-miniature-brains-that-experience-the-passage-of-time — Science Alert user-press write-up of the same Nature s41586-026-10877-x paper). **Promoted to `class-organoid-3d-bioprinting` row Last seen 2026-08-20** by the brief's recurrence + topic-match criterion (organoid + neuroscience-in-vitro intersection items appearing in HN for the second time in 8 days, fitting the existing row's evidence footprint) — **first organoid signal since 2026-08-12**. 18-pt engagement is moderate (above the 5-pt `49266068` 2026-08-12 Wired organoid trigger but below the 100+ pt high-engagement vendor-release bar) so the **refresh qualifies but does not warrant a new theme row** — the existing `class-organoid-3d-bioprinting` row is the canonical synthesis home for organoid + neuroscience-in-vitro signals. **Two named-stack-adjacent items worth flagging for traceability** — **`49367350` "Feature Request: Support AGENTS.md"** (340 pts, 212 cmts, best, by `fg137`, https://github.com/anthropics/claude-code/issues/6235) — GitHub feature-request issue on the Anthropic Claude Code repo asking Anthropic to natively support the `AGENTS.md` standard — same `AGENTS.md` standard referenced in OpenWiki's ROOT_SYSTEM_POLICY at "Repository /AGENTS.md and /CLAUDE.md files are instructions for repository code agents, not local-wiki instructions." The 340-pt + 212-cmt engagement is **the highest-engagement Anthropic-side HN item of the 9-pull streak** and the **second-highest "AI-agent stack" engagement** after the 2026-08-17 Copilot Autofix Snowflake Jira 168-pt top signal; **the first HN signal since the 2026-07-16 `langchain-ai/openwiki` brand entry to surface the `AGENTS.md` standard explicitly**; **adjacent-not-promoted** per scope (Claude Code is not on Robin's named daily-driver stack — Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI are the named agents). If Anthropic adopts native `AGENTS.md` support in a future Claude Code release, that becomes the vendor-adoption event for the standard OpenWiki's tooling already references — same vendor-adoption pattern as the `agent-memory-architecture` row's Last-seen refresh on the 2026-08-13 `49286073` MCP Memory using Google's OKF entry. **`49365443` "Unsloth Dynamic 3.0 GGUFs"** (314 pts, 115 cmts, best, by `jonesy827`, https://unsloth.ai/docs/basics/dynamic-3.0-ggufs)Line truncated
**Latest update — git-repo-1 (2026-08-19T18:08Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-19T18-08-24-164Z/manifest.json`. **Vault HEAD unchanged** at `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (same as the 2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z fetches — **vault is silent for the 3rd consecutive fetch**, **3 calendar days stale** since the last vault HEAD bump on 2026-08-16) — **0 new vault commits** in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window; the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most recent vault activity. **0 new vault mtime changes** — the 25+ untracked vault files + 2 untracked dirs from the 2026-08-17T18:09Z fetch carry forward unchanged (including `celvivo_commercial/1331651_20260630_131201.pdf` last touched 2026-08-17 15:04 +0800 = 07:04 UTC, **before** the 24h window + `templates/类器官IRB申请清单.md` last touched 2026-08-16 10:27 +0800 = 02:27 UTC, well before the window + the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-new-`Review/`-subfolder file at **8-day carry-forward** since 2026-08-11 (mtime `2026-08-11 16:31:54 +0800`), uncommitted since then, **6 fetches silent** on the file). **Wiki HEAD** bumped from `1fc73aeeff541a9f0079ace0fd2d3206ee639193` (2026-08-18T18:10Z fetch) to **`dcb53a2873d37b6396de682d658433c2ea85b376`** (2026-08-19T02:30 +0800, the 2026-08-19 sources-sync); **2 new automated wiki commits** in the 24-hour window: `7e904ec` chore: daily update 2026-08-19 (2026-08-19T02:23 +0800) + `dcb53a2` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19, 2026-08-19T02:30 +0800 — the **fifth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + now `dcb53a2` 2026-08-19). Both commits are routine auto-orchestration: (a) `7e904ec` carried the synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs (per `git show --stat 7e904ec` it touched `.last-update.json` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/05-robin-research.md`); (b) `dcb53a2` re-applied the count-data wipe pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the fifth consecutive time. **10 uncommitted wiki files** in working tree (re-appearing because the very next synthesis edits from this git-repo-1 2026-08-19T18:08Z run re-touch the same files): `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/index.md` (re-appeared as dirty in the working tree at this fetch — was committed by `151d22b` 2026-08-16 daily update, then re-touched by subsequent HN-1 + git-repo-1 synthesis edits) + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`. Wiki edits this run: (a) `/sources/git-repo.md` — refreshed frontmatter HEAD pointers (vault HEAD unchanged at `a4fa5a32`, wiki HEAD `1fc73ae` → `dcb53a2`, tags + `2026-08-19`, timestamp → `2026-08-19T18:08:24Z`), refreshed the Connector / State section to the new `2026-08-19T18-08-24-164Z` raw manifest, refreshed the obsidian-vault working-tree-status section to 2026-08-19 (0 new commits, 0 new mtime changes, untracked set unchanged), refreshed the openwiki-wiki working-tree-status section to 2026-08-19 (2 new automated wiki commits + the carry-forward 10 uncommitted synthesis-layer edits), added 2 new entries at the top of the Recent-commits-for-wiki table (`dcb53a2` sources-sync 2026-08-19 + `7e904ec` daily update 2026-08-19), refreshed the Summary-of-last-48-hours table to add the 2026-08-18T18:10Z → 2026-08-19T18:08Z window data (0 vault commits / 2 wiki commits / operational row noting the **fifth** consecutive sources-sync re-applying the count-data wipe pattern), refreshed the Notable-entity section to bump the `Review/` subfolder entry from 4-day to **8-day carry-forward** at the 2026-08-19 fetch + the `celvivo_commercial/` entry from initial to **3-day carry-forward**, refreshed the `04-Literature/Deep-Reads/` breakdown table with the new carry-forward numbers, refreshed the Synthesis-policy section with this run's delta summary; (b) `/themes/05-robin-research.md` — vault-snapshot metadata refreshed (fetch timestamp → `2026-08-19T18:08:24Z`, raw-manifest path → the new `2026-08-19T18-08-24-164Z` manifest, HEAD unchanged at `a4fa5a32`, `Review/` subfolder entry bumped to **8-day carry-forward** + the `Templates/` + `CelVivo-commercial/` entrieLine truncated **Latest update — git-repo-1 (2026-08-19T18:08Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-19T18-08-24-164Z/manifest.json`. **Vault HEAD unchanged** at `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (same as the 2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z fetches — **vault is silent for the 3rd consecutive fetch**, **3 calendar days stale** since the last vault HEAD bump on 2026-08-16) — **0 new vault commits** in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window; the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most recent vault activity. **0 new vault mtime changes** — the 25+ untracked vault files + 2 untracked dirs from the 2026-08-17T18:09Z fetch carry forward unchanged (including `celvivo_commercial/1331651_20260630_131201.pdf` last touched 2026-08-17 15:04 +0800 = 07:04 UTC, **before** the 24h window + `templates/类器官IRB申请清单.md` last touched 2026-08-16 10:27 +0800 = 02:27 UTC, well before the window + the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-new-`Review/`-subfolder file at **8-day carry-forward** since 2026-08-11 (mtime `2026-08-11 16:31:54 +0800`), uncommitted since then, **6 fetches silent** on the file). **Wiki HEAD** bumped from `1fc73aeeff541a9f0079ace0fd2d3206ee639193` (2026-08-18T18:10Z fetch) to **`dcb53a2873d37b6396de682d658433c2ea85b376`** (2026-08-19T02:30 +0800, the 2026-08-19 sources-sync); **2 new automated wiki commits** in the 24-hour window: `7e904ec` chore: daily update 2026-08-19 (2026-08-19T02:23 +0800) + `dcb53a2` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19, 2026-08-19T02:30 +0800 — the **fifth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + now `dcb53a2` 2026-08-19). Both commits are routine auto-orchestration: (a) `7e904ec` carried the synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs (per `git show --stat 7e904ec` it touched `.last-update.json` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/05-robin-research.md`); (b) `dcb53a2` re-applied the count-data wipe pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the fifth consecutive time. **10 uncommitted wiki files** in working tree (re-appearing because the very next synthesis edits from this git-repo-1 2026-08-19T18:08Z run re-touch the same files): `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/index.md` (re-appeared as dirty in the working tree at this fetch — was committed by `151d22b` 2026-08-16 daily update, then re-touched by subsequent HN-1 + git-repo-1 synthesis edits) + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`. Wiki edits this run: (a) `/sources/git-repo.md` — refreshed frontmatter HEAD pointers (vault HEAD unchanged at `a4fa5a32`, wiki HEAD `1fc73ae` → `dcb53a2`, tags + `2026-08-19`, timestamp → `2026-08-19T18:08:24Z`), refreshed the Connector / State section to the new `2026-08-19T18-08-24-164Z` raw manifest, refreshed the obsidian-vault working-tree-status section to 2026-08-19 (0 new commits, 0 new mtime changes, untracked set unchanged), refreshed the openwiki-wiki working-tree-status section to 2026-08-19 (2 new automated wiki commits + the carry-forward 10 uncommitted synthesis-layer edits), added 2 new entries at the top of the Recent-commits-for-wiki table (`dcb53a2` sources-sync 2026-08-19 + `7e904ec` daily update 2026-08-19), refreshed the Summary-of-last-48-hours table to add the 2026-08-18T18:10Z → 2026-08-19T18:08Z window data (0 vault commits / 2 wiki commits / operational row noting the **fifth** consecutive sources-sync re-applying the count-data wipe pattern), refreshed the Notable-entity section to bump the `Review/` subfolder entry from 4-day to **8-day carry-forward** at the 2026-08-19 fetch + the `celvivo_commercial/` entry from initial to **3-day carry-forward**, refreshed the `04-Literature/Deep-Reads/` breakdown table with the new carry-forward numbers, refreshed the Synthesis-policy section with this run's delta summary; (b) `/themes/05-robin-research.md` — vault-snapshot metadata refreshed (fetch timestamp → `2026-08-19T18:08:24Z`, raw-manifest path → the new `2026-08-19T18-08-24-164Z` manifest, HEAD unchanged at `a4fa5a32`, `Review/` subfolder entry bumped to **8-day carry-forward** + the `Templates/` + `CelVivo-commercial/` entrieLine truncated
@@ -84,7 +90,7 @@ When Robin is ready, configure connectors to start populating the wiki:
- **Slack** — `openwiki auth slack` (needs Slack user token with `search:read` for definitive self-message search) - **Slack** — `openwiki auth slack` (needs Slack user token with `search:read` for definitive self-message search)
- **Notion** — configure Notion MCP via `~/.openwiki/connectors/notion/` - **Notion** — configure Notion MCP via `~/.openwiki/connectors/notion/`
- **X / Twitter** — `openwiki auth x` (needs `OPENWIKI_X_ACCESS_TOKEN`) - **X / Twitter** — `openwiki auth x` (needs `OPENWIKI_X_ACCESS_TOKEN`)
- **Web Search** — set `TAVILY_API_KEY` (active; latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts were skipped because the connector is not enabled in the runtime registry — see [/sources/web-search.md](/sources/web-search.md)) - **Web Search** — set `TAVILY_API_KEY` (active; latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 update attempts were skipped because the connector is not enabled in the runtime registry — see [/sources/web-search.md](/sources/web-search.md))
- **Hacker News** — public feeds, no auth needed - **Hacker News** — public feeds, no auth needed
- **Local git repo** — point the `git-repo` connector at a repo path - **Local git repo** — point the `git-repo` connector at a repo path
@@ -98,9 +104,9 @@ Deferred until Robin configures connectors or asks for specific documentation:
- **Slack evidence index** — `/sources/slack.md` (no Slack connector configured yet) - **Slack evidence index** — `/sources/slack.md` (no Slack connector configured yet)
- **Notion evidence index** — `/sources/notion.md` (no Notion MCP configured yet) - **Notion evidence index** — `/sources/notion.md` (no Notion MCP configured yet)
- **X / Twitter evidence index** — `/sources/x.md` (no X connector configured yet) - **X / Twitter evidence index** — `/sources/x.md` (no X connector configured yet)
- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-08-18 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); **seventh pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-18 pull returns to fully-zero across all four vendor queries + the two workflow queries) — vendor-anchored footprint remains null on the HN lane and Tavily (web-search) remains the productive lane; **two adjacents worth flagging for traceability surfaced this pull: `49348136` "Launch HN: machine0 (YC S26) – Persistent CPU and GPU VMs from the CLI"** (19 pts, 12 cmts, top, `bwm`, https://machine0.io) — **strongest Robin-stack-adjacent item of the pull** by virtue of the **explicit "OpenClaw & Hermes run 24/7" citation in submitter text** — the strongest named-stack cross-walk on this pull and the strongest since the 2026-08-13 DeepSeek Harness developer preview (`49285244`); machine0 is a YC S26 launch for a CLI (`machine0 new mybox` creates a persistent cloud VM, billed by the minute, $0.013/hr up to 60 vCPU / 240 GB RAM + GPUs H100s/H200s/RTX 4000 Ada/8×H200, agents self-serve via CLI or MCP, Suspend/snapshot/resume, block storage 10 GB → 16 TB, per-VM profiles bundling credentials/MCP/prompts/env vars, reproducible builds via NixOS flakes or Ansible + Ubuntu); **adjacent-not-promoted** per scope because (a) 19-pt engagement is below the established refresh thresholds (46-pt MCP Memory + 100-pt vendor release bar); (b) machine0 is not on Robin's named daily-driver stack; (c) the established scope rule on non-named-stack agent-infrastructure launches keeps them adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself; (d) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote a YC S26 launch to a `/themes.md` row by itself; any Hermes / MiniMax-side response on a future pull (e.g. Hermes v0.21 release notes machine0 as a supported VM provider, or a Hermes Agent patch that integrates with machine0-style per-session profiles, or Robin personally adopting machine0 for a subagent / always-on-agent workflow) becomes the first corroborating event for a `hermes-agent-v0-19-quicksilver` row description extension on agent-compute-infrastructure patterns; the same launch was surfaced by the `Cellink` Algolia query as a noise hit on substring fragments (the demo video URL contains the word "calling") — the third HN item this week where a Cellink noise hit was actually an AI-agent item (after `49332326` Agent Mesh and `49330671` Deepseek Harness Plugin on 2026-08-17); **`49348627` "Why your Amazon order confirmation emails have become so unhelpful"** (18 pts, 7 cmts, top, `Macha`, https://www.theverge.com/ai-artificial-intelligence/977733/amazon-order-emails-google-gmail-ai-agents-data) — The Verge article on Amazon's AI-agent-driven order processing feeding AI training data via Gmail — touches the AI-agent data-pipeline lane (agent reads email → agent writes email → user-facing output); **adjacent-not-promoted** per scope (consumer-AI / consumer-email story about Amazon + Google + Gmail's AI agent data flow, not on Robin's named stack; 18-pt engagement is below the refresh thresholds). Three additional flag-for-traceability items stay adjacent-not-promoted under existing scope discipline: **`49337602` GPT-5.6 Sol Pricing Cut by 50%** (601 pts best, 416 cmts, OpenRouter — OpenAI launch, off-scope); **`49348751` Claude Code weekly limits reduce by a third tomorrow** (66 pts top, 27 cmts — Claude Code wrapper change, off-scope; same rubric as the 2026-08-10 Auto mode default + 2026-08-08 Claude Bluetooth-tracking anecdote traceability entries); **`49348163` Degraded performance for multiple models** (133 pts top, 117 cmts, status.claude.com — Claude API status incident, **real-but-incidental exposure** since Robin uses Hermes / MiniMax as daily driver not Claude API) — see HN source page) - **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-08-20 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); **ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 + 2026-08-19 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-20 pull reverts to the noise-only pattern on the 4 vendor queries but with **two application-domain thematic hits** — `49366519` organoid + `49373812` miniature-brains — **the first pull in the 9-pull streak to surface a thematic on the `organoid`/`3Brain` Algolia lanes since the 2026-08-12 `49266068` Wired feature**) — vendor-anchored footprint remains null on the HN lane and Tavily (web-search) remains the productive lane; the **2026-08-20 pull produces a `class-organoid-3d-bioprinting` theme-row Last-seen refresh 2026-08-12 → 2026-08-20** via the recurrence criterion (the `49366519` Nature organoid-time-passage paper 18 pts + `49373812` Science Alert cross-walk — second neural-organoid HN signal in 9 pulls); **two named-stack-adjacent items flagged for traceability this pull: `49367350` "Feature Request: Support AGENTS.md"** (340 pts, 212 cmts, best, by `fg137`, github.com/anthropics/claude-code/issues/6235 — GitHub feature-request issue on the Anthropic Claude Code repo asking Anthropic to natively support the `AGENTS.md` standard, the same AGENTS.md standard referenced in OpenWiki's ROOT_SYSTEM_POLICY at "Repository /AGENTS.md and /CLAUDE.md files are instructions for repository code agents, not local-wiki instructions." — **the first HN signal since the 2026-07-16 `langchain-ai/openwiki` brand entry to surface the `AGENTS.md` standard explicitly**; if Anthropic adopts native `AGENTS.md` support in a future Claude Code release, that becomes the vendor-adoption event for the standard OpenWiki's tooling already references — same vendor-adoption pattern as the `agent-memory-architecture` row's Last-seen refresh on the 2026-08-13 `49286073` MCP Memory using Google's OKF entry; **adjacent-not-promoted** per scope because (a) Claude Code is not on Robin's named daily-driver stack (Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI are the named agents); (b) the established scope rule keeps non-named-stack agent-infrastructure features adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself; (c) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote a third-party vendor feature request to a `/themes.md` row by itself; **`49365443` "Unsloth Dynamic 3.0 GGUFs"** (314 pts, 115 cmts, best, by `jonesy827`, unsloth.ai/docs/basics/dynamic-3.0-ggufs — Unsloth's release of **Dynamic 3.0 GGUFs** quantization format; **upstream of any quantized MiniMax-M3 path** because Unsloth publishes `unsloth/MiniMax-M3-GGUF` (the HuggingFace citation on the `MiniMax-m3` row for the quantized local-LLM run path); **adjacent-not-promoted** per scope (Unsloth quantization-format release, not a MiniMax model change); the established scope rule keeps inference-tooling releases adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself; any future HN item at higher engagement combining Unsloth Dynamic 3.0 + explicit MiniMax-M3-GGUF compatibility notes becomes the first corroborating event for a `MiniMax-m3-row-annex-local-llm-runtime-changes` annex on the existing row) — see HN source page)
- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts skipped — connector not enabled in runtime registry, `TAVILY_API_KEY` missing; disk config shows `enabled: true` + 6 Chinese queries but the runtime registry disagrees — operational concern, not a wiki-synthesis concern) - **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts skipped — connector not enabled in runtime registry, `TAVILY_API_KEY` missing; disk config shows `enabled: true` + 6 Chinese queries but the runtime registry disagrees — operational concern, not a wiki-synthesis concern)
- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-18 18:10 UTC — covers Robin's Obsidian vault (HEAD `a4fa5a32` 2026-08-16, **0 new vault commits + 0 new mtime changes since the 2026-08-17T18:09Z fetch**; vault is silent in the 24-hour window; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, 2 calendar days stale; the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-new-`Review/`-subfolder is at **7-day carry-forward** (mtime `2026-08-11 16:31:54 +0800`), uncommitted since 2026-08-11, structural signal continues to weaken) + OpenWiki wiki (HEAD `1fc73ae` 2026-08-18, **2 new automated wiki commits since the 2026-08-17T18:09Z fetch**: `8127797` chore: daily update 2026-08-18 (2026-08-18T02:23 +0800) + `1fc73ae` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, 2026-08-18T02:30 +0800, the **fourth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18) + the prior 2026-08-17 fetch's 4 wiki commits (`151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) + **1 new wiki file from the 2026-08-17 fetch**: `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z); **20 vault commits since 2026-08-03 fetch** (unchanged across the 2026-08-17 + 2026-08-18 fetches); **25+ untracked vault files + 2 untracked directories** carry forward unchanged from the 2026-08-17T18:09Z fetch (including 8 × `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + the 7-day carry-forward `Review/zhou2023_computer_vision_microfluidics.md` + `__pycache__/...pyc` Python build noise + `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` v1.0; **0 new untracked files in the 24-hour window**); wiki-side carries **9 uncommitted synthesis-layer edits** (re-appearing because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files: `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`); **operational issue carries forward** — the `2507925` 2026-08-15 sources-sync count-data wipe (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000) is now re-applied by the `997b648` 2026-08-16 sources-sync + the `be49285` 2026-08-17 sources-sync + the `1fc73ae` 2026-08-18 sources-sync (NocoDB / Wiki.js / RAGFlow count values stay zero across all **4** sources-syncs); the on-disk source configs are unaffected; data is recoverable from `git show 1737454:sources/nocodb.md` etc. — recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected) - **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-20 18:09 UTC — covers Robin's Obsidian vault (HEAD `a4fa5a32` 2026-08-16, **0 new vault commits + 0 new mtime changes since the 2026-08-19T18:08Z fetch**; vault is silent in the 24-hour window for the **4th consecutive fetch**; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **4 calendar days stale**; the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-new-`Review/`-subfolder is at **9-day carry-forward** (mtime `2026-08-11 16:31:54 +0800`), uncommitted since 2026-08-11, structural signal continues to weaken) + OpenWiki wiki (HEAD `bd30339` 2026-08-20, **2 new automated wiki commits since the 2026-08-19T18:08Z fetch**: `a44f284` chore: daily update 2026-08-20 (2026-08-20T02:23 +0800) + `bd30339` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-20, 2026-08-20T02:30 +0800, the **sixth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + now `bd30339` 2026-08-20) + the prior 2026-08-19 fetch's 2 wiki commits (`7e904ec` daily update 2026-08-19 + `dcb53a2` sources-sync 2026-08-19) + the prior 2026-08-17 fetch's 4 wiki commits (`151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) + **1 new wiki file from the 2026-08-17 fetch**: `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z); **20 vault commits since 2026-08-03 fetch** (unchanged across the 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 fetches); **25+ untracked vault files + 2 untracked directories** carry forward unchanged from the 2026-08-17T18:09Z fetch (including 8 × `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + the 9-day carry-forward `Review/zhou2023_computer_vision_microfluidics.md` + `__pycache__/...pyc` Python build noise + `celvivo_commercial/1331651_20260630_131201.pdf` (4-day carry-forward) + `templates/类器官IRB申请清单.md` v1.0 (4-day carry-forward); **0 new untracked files in the 24-hour window**); wiki-side carries **10 uncommitted synthesis-layer edits** (re-appearing because the very next synthesis edits from this git-repo-1 2026-08-20T18:09Z run re-touch the same files: `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/index.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`); **operational issue carries forward** — the `2507925` 2026-08-15 sources-sync count-data wipe (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000) is now re-applied across **6 sources-syncs** (`997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20); the on-disk source configs are unaffected; data is recoverable from `git show 1737454:sources/nocodb.md` etc. — recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected)
- **Project / people / company pages** — only created when durable entities emerge from ingested data - **Project / people / company pages** — only created when durable entities emerge from ingested data
These are intentionally blank until there is real evidence to put in them. Populating them with placeholders would dilute the synthesis layer..esis layer..sis platform 4-commit LDR cycle** (`e542c977` adds file 186 lines → `8699a154` page 946 9 项 SOP 重写版 105+/122- → `aacba7aa` frontmatter title 改中文 1 line → `297f106d` page 934 修齐 5+/4-) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3 轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型; Wiki.js Id=1716, NocoDB Id=770); **23 untracked vault files** unchanged from the 2026-08-13 fetch (no new untracked files in the 24-hour window) — including 8 × `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + **the first entry in the new `Review/` subfolder** (`04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` — Zhou 2023 computer vision + microfluidics, Robin deep-read in progress, still-uncommitted at the 2026-08-15 fetch) + `__pycache__/...pyc` Python build noise; wiki-side carries **10 uncommitted synthesis-layer edits** accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + web-search-1 2026-08-15 + this git-repo-1 2026-08-15 runs; **one operational issue surfaced this run** — the `2507925` 2026-08-15 sources-sync committed empty count values for NocoDB / SeaFile / Wiki.js / RAGFlow (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000); the on-disk source configs are unaffected; data is recoverable from `git show 1737454:sources/nocodb.md` etc. — recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected) These are intentionally blank until there is real evidence to put in them. Populating them with placeholders would dilute the synthesis layer..esis layer..sis platform 4-commit LDR cycle** (`e542c977` adds file 186 lines → `8699a154` page 946 9 项 SOP 重写版 105+/122- → `aacba7aa` frontmatter title 改中文 1 line → `297f106d` page 934 修齐 5+/4-) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3 轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型; Wiki.js Id=1716, NocoDB Id=770); **23 untracked vault files** unchanged from the 2026-08-13 fetch (no new untracked files in the 24-hour window) — including 8 × `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + **the first entry in the new `Review/` subfolder** (`04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` — Zhou 2023 computer vision + microfluidics, Robin deep-read in progress, still-uncommitted at the 2026-08-15 fetch) + `__pycache__/...pyc` Python build noise; wiki-side carries **10 uncommitted synthesis-layer edits** accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + web-search-1 2026-08-15 + this git-repo-1 2026-08-15 runs; **one operational issue surfaced this run** — the `2507925` 2026-08-15 sources-sync committed empty count values for NocoDB / SeaFile / Wiki.js / RAGFlow (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000); the on-disk source configs are unaffected; data is recoverable from `git show 1737454:sources/nocodb.md` etc. — recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected)
sources/README.md
+6 -6
View File
@@ -13,9 +13,9 @@ Per-connector evidence indexes. Each connector gets its own page (for example `g
| Connector | Page | Status | | Connector | Page | Status |
| --- | --- | --- | | --- | --- | --- |
| Hacker News (`hackernews-1`, LLM-agent topics) | [/sources/hackernews.md](/sources/hackernews.md) | active (last 2026-08-19 18:00 UTC — eighth pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries; two adjacents worth flagging for traceability: `49364559` OpenRouter Is Joining Stripe (6 pts, OpenRouter's own blog post confirming the 2026-08-17 rumor) + `49363710` Launch HN: OneCLI (YC S26) (21 pts, cites Hermes/OpenClaw/NanoClaw in submitter text)) | | Hacker News (`hackernews-1`, LLM-agent topics) | [/sources/hackernews.md](/sources/hackernews.md) | active (last 2026-08-20 18:00 UTC — ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries but with two application-domain thematic hits (`49366519` Nature brain-organoid time-passage paper + `49373812` Science Alert cross-walk) on the `organoid`/`3Brain` lanes; `class-organoid-3d-bioprinting` Last-seen refresh 2026-08-12 → 2026-08-20; two named-stack-adjacent items flagged for traceability: `49367350` "Feature Request: Support AGENTS.md" 340 pts (Claude Code issue requesting native `AGENTS.md` standard support — same AGENTS.md standard referenced in OpenWiki's ROOT_SYSTEM_POLICY) + `49365443` "Unsloth Dynamic 3.0 GGUFs" 314 pts (Unsloth quantization-format release upstream of `unsloth/MiniMax-M3-GGUF`)) |
| Git repo (`git-repo-1`, Obsidian vault + OpenWiki wiki) | [/sources/git-repo.md](/sources/git-repo.md) | active (last 2026-08-17 18:09 UTC — 7 new vault commits since 2026-08-15: Quintard 2024 + Guo 2026 LDR cycles + 2 new untracked dirs `celvivo_commercial/` + `templates/`; 4 new wiki commits since 2026-08-15 + 1 new wiki file `sources/openwiki-version-drift.md`) | | Git repo (`git-repo-1`, Obsidian vault + OpenWiki wiki) | [/sources/git-repo.md](/sources/git-repo.md) | active (last 2026-08-20 18:09 UTC — 0 new vault commits since 2026-08-19T18:08Z fetch (vault silent for the 4th consecutive fetch); 2 new automated wiki commits since 2026-08-19T18:08Z fetch (`a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20, the sixth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern)) |
| Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing) | | Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing) |
Additional connectors appear here automatically once they are authenticated and ingested at least once. Additional connectors appear here automatically once they are authenticated and ingested at least once.
@@ -27,9 +27,9 @@ Additional connectors appear here automatically once they are authenticated and
| Slack | not configured | `openwiki auth slack` | Needs `search:read` for definitive self-message search; otherwise falls back to recent conversations. | | Slack | not configured | `openwiki auth slack` | Needs `search:read` for definitive self-message search; otherwise falls back to recent conversations. |
| Notion | not configured | Notion MCP credentials | Discovery via `openwiki_list_mcp_tools`; do not guess tool names. | | Notion | not configured | Notion MCP credentials | Discovery via `openwiki_list_mcp_tools`; do not guess tool names. |
| X / Twitter | not configured | `OPENWIKI_X_ACCESS_TOKEN` via `openwiki auth x` | Streams: `home_timeline`, `user_posts`, `mentions`, `bookmarks`, `list_posts`. | | X / Twitter | not configured | `OPENWIKI_X_ACCESS_TOKEN` via `openwiki auth x` | Streams: `home_timeline`, `user_posts`, `mentions`, `bookmarks`, `list_posts`. |
| Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts were skipped because the connector was not enabled in the runtime registry. Evidence at [/sources/web-search.md](/sources/web-search.md). | | Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 update attempts were skipped because the connector was not enabled in the runtime registry. Evidence at [/sources/web-search.md](/sources/web-search.md). |
| Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Source-specific query set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` (LLM-agent topics per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories"). Last successful pull 2026-08-19 18:00 UTC — **eighth pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-19 pull returns to fully-zero across all four vendor queries + the two workflow queries; empty-pulls-on-vendor-queries is normal cadence, not an outage). Adjacents flagged for traceability this run: `49364559` OpenRouter Is Joining Stripe (6 pts, formal confirmation of the 2026-08-17 rumored acquisition) + `49363710` Launch HN: OneCLI (YC S26) (21 pts, cites Hermes/OpenClaw/NanoClaw in submitter text). The combined machine0 (2026-08-18) + OneCLI (2026-08-19) cluster is the strongest two-pull named-stack-cross-walk density since the 2026-08-13 DeepSeek Harness + Codex Linux desktop combination. Evidence at [/sources/hackernews.md](/sources/hackernews.md). | | Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Source-specific query set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` (LLM-agent topics per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories"). Last successful pull 2026-08-20 18:00 UTC — **ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 + 2026-08-19 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-20 pull reverts to the noise-only pattern on the 4 vendor queries but with **two application-domain thematic hits** — `49366519` organoid + `49373812` miniature-brains — **the first pull in the 9-pull streak to surface a thematic on the `organoid`/`3Brain` Algolia lanes since the 2026-08-12 `49266068` Wired feature**; empty-pulls-on-vendor-queries is normal cadence, not an outage). The 2026-08-20 pull produces a `class-organoid-3d-bioprinting` theme-row Last-seen refresh 2026-08-12 → 2026-08-20 via the recurrence criterion (the `49366519` Nature organoid-time-passage paper 18 pts + `49373812` Science Alert cross-walk — second neural-organoid HN signal in 9 pulls); two named-stack-adjacent items flagged for traceability: `49367350` "Feature Request: Support AGENTS.md" 340 pts (Claude Code issue requesting native `AGENTS.md` standard support — same AGENTS.md standard referenced in OpenWiki's ROOT_SYSTEM_POLICY; the **first HN signal since the 2026-07-16 `langchain-ai/openwiki` brand entry to surface the `AGENTS.md` standard explicitly**) + `49365443` "Unsloth Dynamic 3.0 GGUFs" 314 pts (Unsloth quantization-format release upstream of `unsloth/MiniMax-M3-GGUF` cited on the `MiniMax-m3` row). Both adjacents stay adjacent-not-promoted per scope discipline. Evidence at [/sources/hackernews.md](/sources/hackernews.md). |
| Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-18 18:10 UTC — **0 new vault commits in the 24-hour window** (vault silent; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity); 2 new automated wiki commits since the 2026-08-17 fetch (`8127797` daily update 2026-08-18 + `1fc73ae` sources-sync 2026-08-18, the fourth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern). | | Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-20 18:09 UTC — **0 new vault commits in the 24-hour window** (vault silent for the 4th consecutive fetch; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **4 calendar days stale**); 2 new automated wiki commits since the 2026-08-19 fetch (`a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20, the **sixth** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + now `bd30339` 2026-08-20). |
## How new source pages get created ## How new source pages get created
sources/git-repo.md
+188 -92
View File
@@ -1,10 +1,10 @@
--- ---
type: "Reference" type: "Reference"
title: "Git repo — evidence index (Obsidian vault, Robin)" title: "Git repo — evidence index (Obsidian vault, Robin)"
description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, **0 new vault commits in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window — vault is silent for the 3rd consecutive fetch**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD dcb53a2, 2026-08-19, **2 new automated wiki commits in the 2026-08-18T18:10Z → 2026-08-19T18:08Z window: `7e904ec` daily update 2026-08-19 + `dcb53a2` sources-sync 2026-08-19 — the fifth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here." description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, **0 new vault commits in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window — vault is silent for the 4th consecutive fetch after the 2026-08-16 Quintard + Guo cluster**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD bd30339, 2026-08-20, **2 new automated wiki commits in the 2026-08-19T18:08Z → 2026-08-20T18:09Z window: `a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20 — the sixth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
resource: "~/.openwiki/connectors/git-repo/config.json" resource: "~/.openwiki/connectors/git-repo/config.json"
tags: [git-repo, evidence, vault, openwiki-wiki, source, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13] tags: [git-repo, evidence, vault, openwiki-wiki, source, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13]
timestamp: 2026-08-19T18:08:24Z timestamp: 2026-08-20T18:09:15Z
--- ---
# Git repo — evidence index (Obsidian vault + OpenWiki wiki) # Git repo — evidence index (Obsidian vault + OpenWiki wiki)
@@ -47,52 +47,57 @@ help locate things in the vault, not summarize their content.
the 4 sources-syncs (`997b648` + `be49285` + `1fc73ae` + `dcb53a2`) the 4 sources-syncs (`997b648` + `be49285` + `1fc73ae` + `dcb53a2`)
all re-applied the `2507925` 2026-08-15 count-data wipe pattern). all re-applied the `2507925` 2026-08-15 count-data wipe pattern).
- **Auth:** local paths only — no remote, no credentials. - **Auth:** local paths only — no remote, no credentials.
- **Latest fetch:** `2026-08-19T18:08:24Z` (raw manifest - **Latest fetch:** `2026-08-20T18:09:15Z` (raw manifest
`~/.openwiki/connectors/git-repo/raw/2026-08-19T18-08-24-164Z/manifest.json`). `~/.openwiki/connectors/git-repo/raw/2026-08-20T18-09-15-122Z/manifest.json`).
- **Source config:** `~/.openwiki/connectors/git-repo/config.json` - **Source config:** `~/.openwiki/connectors/git-repo/config.json`
- **State:** `~/.openwiki/connectors/git-repo/state.json` records - **State:** `~/.openwiki/connectors/git-repo/state.json` records
`latestIds` per repo; the 2026-08-19T18:08Z fetch observed vault HEAD `latestIds` per repo; the 2026-08-20T18:09Z fetch observed vault HEAD
unchanged at `a4fa5a32` (2026-08-16 — same as the 2026-08-17T18:09Z + unchanged at `a4fa5a32` (2026-08-16 — same as the 2026-08-17T18:09Z +
2026-08-18T18:10Z + 2026-08-19T18:08Z fetches; **0 new vault commits 2026-08-18T18:10Z + 2026-08-19T18:08Z + 2026-08-20T18:09Z fetches;
in the 24-hour window — vault is silent for the 3rd consecutive **0 new vault commits in the 24-hour window — vault is silent for
fetch**), and observed `openwiki-wiki` bumped from `1fc73ae` the 4th consecutive fetch** after the 2026-08-16 Quintard + Guo
(2026-08-18T18:10Z fetch) to `dcb53a2` (2 new automated wiki commits cluster), and observed `openwiki-wiki` bumped from `dcb53a2`
in the 24-hour window: `7e904ec` daily update 2026-08-19 + (2026-08-19T18:08Z fetch) to `bd30339` (2 new automated wiki commits
`dcb53a2` sources-sync 2026-08-19 — the **fifth** consecutive in the 24-hour window: `a44f284` daily update 2026-08-20 +
`bd30339` sources-sync 2026-08-20 — the **sixth** consecutive
sources-sync re-applying the 2026-08-15 count-data wipe pattern sources-sync re-applying the 2026-08-15 count-data wipe pattern
after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae`
2026-08-18). 2026-08-18 + `dcb53a2` 2026-08-19 + now `bd30339` 2026-08-20).
## obsidian-vault — working-tree status (2026-08-19) ## obsidian-vault — working-tree status (2026-08-20)
- **Branch:** `main` - **Branch:** `main`
- **HEAD:** `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (vault HEAD - **HEAD:** `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (vault HEAD
**unchanged** at `a4fa5a32` across the 2026-08-19T18:08Z fetch — **unchanged** at `a4fa5a32` across the 2026-08-20T18:09Z fetch —
**0 new commits** in the 2026-08-18T18:10Z → 2026-08-19T18:08Z **0 new commits** in the 2026-08-19T18:08Z → 2026-08-20T18:09Z
24-hour window; the vault is silent for the **3rd consecutive 24-hour window; the vault is silent for the **4th consecutive
fetch** after the 2026-08-17T18:09Z + 2026-08-18T18:10Z silent fetch** after the 2026-08-17T18:09Z + 2026-08-18T18:10Z +
windows. The 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR 2026-08-19T18:08Z silent windows. The 2026-08-16 Quintard 2024
cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol
the most recent committed vault activity (vault HEAD last bumped 3-commit LDR cycle remain the most recent committed vault
on 2026-08-16, **3 calendar days before this fetch** — same state activity (vault HEAD last bumped on 2026-08-16, **4 calendar
as the 2026-08-17T18:09Z + 2026-08-18T18:10Z fetches). days before this fetch** — same state as the
2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z
fetches).
- **mtime activity in window:** **0 new mtime changes** in the - **mtime activity in window:** **0 new mtime changes** in the
2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window. The 2 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window. The 2
untracked dirs from the 2026-08-17T18:09Z fetch are unchanged: untracked dirs from the 2026-08-17T18:09Z fetch are unchanged:
`celvivo_commercial/` last touched 2026-08-17 15:04 +0800 (= 07:04 `celvivo_commercial/` last touched 2026-08-17 15:04 +0800 (= 07:04
UTC, **before** the 24h window) + `templates/` last touched UTC, **before** the 24h window) + `templates/` last touched
2026-08-16 10:27 +0800 (= 02:27 UTC, well before the window). The 2026-08-16 10:27 +0800 (= 02:27 UTC, well before the window). The
`Review/zhou2023_computer_vision_microfluidics.md` first-entry `Review/zhou2023_computer_vision_microfluidics.md` first-entry
file is unchanged from the 2026-08-17T18:09Z fetch (mtime file is unchanged from the 2026-08-17T18:09Z fetch (mtime
2026-08-11, **8-day carry-forward** in the untracked set at this 2026-08-11, **9-day carry-forward** in the untracked set at this
fetch; the structural signal continues to weaken per the fetch; the structural signal continues to weaken per the
Notable-entity entry on the `Review/` subfolder). Notable-entity entry on the `Review/` subfolder).
- **Ahead of origin/main:** 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17T18:09Z + 2026-08-18T18:10Z fetches — vault is silent in the 2026-08-18T18:10Z → 2026-08-19T18:08Z window). - **Ahead of origin/main:** 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z fetches — vault is silent in the 2026-08-19T18:08Z → 2026-08-20T18:09Z window).
- **Dirty:** yes — the untracked file set is **unchanged** from the - **Dirty:** yes — the untracked file set is **unchanged** from the
2026-08-17T18:09Z fetch (no new untracked files or directories 2026-08-17T18:09Z fetch (no new untracked files or directories
appeared in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour appeared in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour
window, and no new untracked files or directories appeared in the window, no new untracked files or directories appeared in the
2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window either). The 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window either, and
no new untracked files or directories appeared in the
2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window either). The
25+ untracked entries from the 2026-08-17T18:09Z fetch carry 25+ untracked entries from the 2026-08-17T18:09Z fetch carry
forward unchanged: 8 × `02-Clients/Agents/区域-2026-0807.md` forward unchanged: 8 × `02-Clients/Agents/区域-2026-0807.md`
distributor-rebuild files (per the 2026-08-07 Hermes hook 4 sweep) distributor-rebuild files (per the 2026-08-07 Hermes hook 4 sweep)
@@ -107,10 +112,10 @@ help locate things in the vault, not summarize their content.
directories from the 2026-08-17T18:09Z fetch (`celvivo_commercial/` directories from the 2026-08-17T18:09Z fetch (`celvivo_commercial/`
+ `templates/`). The **`Review/zhou2023_computer_vision_microfluidics.md` + `templates/`). The **`Review/zhou2023_computer_vision_microfluidics.md`
first entry in the new `Review/` subfolder** is still **untracked** first entry in the new `Review/` subfolder** is still **untracked**
(Robin has not yet committed it) — **8-day carry-forward** at this (Robin has not yet committed it) — **9-day carry-forward** at this
fetch; the structural signal continues to weaken per the fetch; the structural signal continues to weaken per the
Notable-entity entry on the `Review/` subfolder (the subfolder has Notable-entity entry on the `Review/` subfolder (the subfolder has
been a single-entry watchlist since 2026-08-13, now **6 fetches been a single-entry watchlist since 2026-08-13, now **7 fetches
silent**). silent**).
- **Working-tree status (raw manifest, abbreviated):** - **Working-tree status (raw manifest, abbreviated):**
@@ -321,34 +326,36 @@ indexed on [`/sources/literature.md`](/sources/literature.md). The
`1614ccf9`) are the 8-step SOP rewrite cycle (v3 → v11) Robin re-ran `1614ccf9`) are the 8-step SOP rewrite cycle (v3 → v11) Robin re-ran
on the same paper. on the same paper.
## openwiki-wiki — working-tree status (2026-08-19) ## openwiki-wiki — working-tree status (2026-08-20)
- **Branch:** `main` - **Branch:** `main`
- **HEAD:** `dcb53a2873d37b6396de682d658433c2ea85b376` (the - **HEAD:** `bd30339182707c42328c2920a7d744eb360df618` (the
`chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts `chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts
(sources-sync 2026-08-19)` commit — same auto-source-sync job that (sources-sync 2026-08-20)` commit — same auto-source-sync job that
carried the 2026-08-15 count-data wipe + re-applied the pattern on carried the 2026-08-15 count-data wipe + re-applied the pattern on
2026-08-16 + 2026-08-17 + 2026-08-18 + now 2026-08-19; see 2026-08-16 + 2026-08-17 + 2026-08-18 + 2026-08-19 + now 2026-08-20;
Notable-entity § "2026-08-15 sources-sync bug" for the operational see Notable-entity § "2026-08-15 sources-sync bug" for the
note). The 2026-08-19T18:08Z fetch observed wiki HEAD bumped from operational note). The 2026-08-20T18:09Z fetch observed wiki HEAD
`1fc73ae` (2026-08-18T18:10Z fetch) to `dcb53a2` — **2 new bumped from `dcb53a2` (2026-08-19T18:08Z fetch) to `bd30339` —
automated wiki commits** in the 2026-08-18T18:10Z → **2 new automated wiki commits** in the 2026-08-19T18:08Z →
2026-08-19T18:08Z 24-hour window: (a) `7e904ec` chore: daily update 2026-08-20T18:09Z 24-hour window: (a) `a44f284` chore: daily update
2026-08-19 (2026-08-19 02:23 +0800); (b) `dcb53a2` chore(sources): 2026-08-20 (2026-08-20 02:23 +0800); (b) `bd30339` chore(sources):
refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync
2026-08-19, 2026-08-19 02:30 +0800). Both commits are routine 2026-08-20, 2026-08-20 02:30 +0800). Both commits are routine
auto-orchestration — the `7e904ec` daily update carried the auto-orchestration — the `a44f284` daily update carried the
synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + synthesis-layer edits from the prior HN-1 2026-08-20T18:00Z +
web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs; the web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z
`dcb53a2` sources-sync re-applied the count-data wipe pattern on runs; the `bd30339` sources-sync re-applied the count-data wipe
NocoDB / SeaFile / Wiki.js / RAGFlow for the **fifth** consecutive pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the **sixth**
time. consecutive time (after `997b648` 2026-08-16 + `be49285`
2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + now
`bd30339` 2026-08-20).
- **Working-tree state:** 10 modified files (uncommitted — pending - **Working-tree state:** 10 modified files (uncommitted — pending
next CLI orchestration), **unchanged from the 2026-08-18T18:10Z next CLI orchestration), **unchanged from the 2026-08-19T18:08Z
fetch** (the `7e904ec` 2026-08-19 daily update committed some fetch** (the `a44f284` 2026-08-20 daily update committed some
synthesis edits but the working tree still shows 10 uncommitted synthesis edits but the working tree still shows 10 uncommitted
files because the very next synthesis edits from this git-repo-1 files because the very next synthesis edits from this git-repo-1
2026-08-19T18:08Z run re-touch the same files). The 10 dirty files 2026-08-20T18:09Z run re-touch the same files). The 10 dirty files
are: are:
- `.last-update.json` — CLI metadata, will be updated when this run's - `.last-update.json` — CLI metadata, will be updated when this run's
`status: complete` lands. `status: complete` lands.
@@ -357,51 +364,57 @@ on the same paper.
+ git-repo-1 2026-08-13 runs, plus the "Latest update — + git-repo-1 2026-08-13 runs, plus the "Latest update —
git-repo-1 (2026-08-15T18:07Z)" + "Latest update — git-repo-1 git-repo-1 (2026-08-15T18:07Z)" + "Latest update — git-repo-1
(2026-08-17T18:09Z)" + "Latest update — git-repo-1 (2026-08-17T18:09Z)" + "Latest update — git-repo-1
(2026-08-18T18:10Z)" paragraphs added by the 2026-08-15 + (2026-08-18T18:10Z)" + "Latest update — git-repo-1
2026-08-17 + 2026-08-18 git-repo runs; this git-repo-1 (2026-08-19T18:08Z)" paragraphs added by the 2026-08-15 +
2026-08-19T18:08Z run adds the "Latest update — git-repo-1 2026-08-17 + 2026-08-18 + 2026-08-19 git-repo runs; this
(2026-08-19T18:08Z)" paragraph and updates the Backlog git-repo git-repo-1 2026-08-20T18:09Z run adds the "Latest update —
entry to reflect the new wiki HEAD `dcb53a2`. git-repo-1 (2026-08-20T18:09Z)" paragraph and updates the
Backlog git-repo entry to reflect the new wiki HEAD `bd30339`.
- `sources/README.md` — refreshed connector-roll table row for - `sources/README.md` — refreshed connector-roll table row for
web-search-1 (added the 2026-08-15 + 2026-08-17 + 2026-08-18 + web-search-1 (added the 2026-08-15 + 2026-08-17 + 2026-08-18 +
2026-08-19 skips to the 7-entry skip streak) + added frontmatter 2026-08-19 + 2026-08-20 skips to the 8-entry skip streak) +
placeholders to nocodb.md / ragflow.md / seafile.md / wikijs.md added frontmatter placeholders to nocodb.md / ragflow.md /
during the 2026-08-15 daily update. seafile.md / wikijs.md during the 2026-08-15 daily update.
- `sources/hackernews.md` — accumulated "Latest update — - `sources/hackernews.md` — accumulated "Latest update —
2026-08-15 18:00 UTC" + "Latest update — 2026-08-16 18:00 UTC" + 2026-08-15 18:00 UTC" + "Latest update — 2026-08-16 18:00 UTC" +
"Latest update — 2026-08-17 18:00 UTC" + "Latest update — "Latest update — 2026-08-17 18:00 UTC" + "Latest update —
2026-08-18 18:00 UTC" + "Latest update — 2026-08-19 18:00 UTC" 2026-08-18 18:00 UTC" + "Latest update — 2026-08-19 18:00 UTC"
sections from the prior HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 + "Latest update — 2026-08-20 18:00 UTC" sections from the
2026-08-17 + HN-1 2026-08-18 + HN-1 2026-08-19 runs (Auto-research prior HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 +
with codex 232x Faster Kernel + Anthropic multi-agent + HN-1 2026-08-18 + HN-1 2026-08-19 + HN-1 2026-08-20 runs
Stripe/OpenRouter + Copilot Autofix + Qwen 3.8 27B + Agent Mesh + (Auto-research with codex 232x Faster Kernel + Anthropic
machine0 YC S26 + Amazon order emails AI-agent data + multi-agent + Stripe/OpenRouter + Copilot Autofix + Qwen 3.8
OpenRouter-Stripe formal confirmation + OneCLI + Extensible 27B + Agent Mesh + machine0 YC S26 + Amazon order emails
Software + Frugal Tokens flag-for-traceability callouts + the AI-agent data + OpenRouter-Stripe formal confirmation + OneCLI
4th / 5th / 6th / 7th / 8th consecutive empty / noise-only + Extensible Software + Frugal Tokens + the Nature brain
Algolia lane streak notes) — landed in uncommitted state during organoid time-passage paper + Anthropic Claude Code AGENTS.md
the HN-1 runs. feature request + Unsloth Dynamic 3.0 GGUFs flag-for-
traceability callouts + the 4th / 5th / 6th / 7th / 8th /
9th consecutive empty / noise-only Algolia lane streak notes)
— landed in uncommitted state during the HN-1 runs.
- `sources/index.md` — re-appears as dirty in the working tree at - `sources/index.md` — re-appears as dirty in the working tree at
this fetch (was committed by `151d22b` 2026-08-16 daily update, this fetch (was committed by `151d22b` 2026-08-16 daily update,
then re-touched by subsequent HN-1 + git-repo-1 synthesis edits then re-touched by subsequent HN-1 + git-repo-1 synthesis edits
and re-appears as uncommitted). Status: accumulated and re-appears as uncommitted). Status: accumulated
synthesis-layer edits from the prior HN-1 2026-08-13 + HN-1 synthesis-layer edits from the prior HN-1 2026-08-13 + HN-1
2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18
+ HN-1 2026-08-19 + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + HN-1 2026-08-19 + HN-1 2026-08-20 + git-repo-1 2026-08-13 +
+ git-repo-1 2026-08-17 + git-repo-1 2026-08-18 + this git-repo-1 2026-08-15 + git-repo-1 2026-08-17 + git-repo-1
git-repo-1 2026-08-19 runs. 2026-08-18 + git-repo-1 2026-08-19 + this git-repo-1
2026-08-20 runs.
- `sources/nocodb.md` — `openwiki_generated: true` placeholder - `sources/nocodb.md` — `openwiki_generated: true` placeholder
frontmatter auto-applied during the 2026-08-15 daily update + frontmatter auto-applied during the 2026-08-15 daily update +
carried forward in 2026-08-16 + 2026-08-17 + 2026-08-18 + carried forward in 2026-08-16 + 2026-08-17 + 2026-08-18 +
2026-08-19 daily updates; **placeholder resolved by the 2026-08-19 + 2026-08-20 daily updates; **placeholder resolved
2026-08-18T18:10Z update run** (proper `type` / `title` / by the 2026-08-18T18:10Z update run** (proper `type` / `title` /
`description` / `tags` frontmatter now in place); **count data `description` / `tags` frontmatter now in place); **count data
wiped** by `2507925` 2026-08-15 sources-sync (NocoDB went from wiped** by `2507925` 2026-08-15 sources-sync (NocoDB went from
6614 → 0 records) and the wipe persists across the 4 subsequent 6614 → 0 records) and the wipe persists across the 5 subsequent
sources-syncs (`997b648` 2026-08-16 + `be49285` 2026-08-17 + sources-syncs (`997b648` 2026-08-16 + `be49285` 2026-08-17 +
`1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 — the count stays at `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339`
0 across all 5 sources-syncs); body content (13 literature tables 2026-08-20 — the count stays at 0 across all 6 sources-syncs);
+ record counts from `1737454` baseline) remains intact. body content (13 literature tables + record counts from
`1737454` baseline) remains intact.
- `sources/ragflow.md` — same `openwiki_generated: true` placeholder - `sources/ragflow.md` — same `openwiki_generated: true` placeholder
auto-applied during the 2026-08-15 daily update; auto-applied during the 2026-08-15 daily update;
**placeholder resolved by the 2026-08-18T18:10Z update run** **placeholder resolved by the 2026-08-18T18:10Z update run**
@@ -421,15 +434,18 @@ on the same paper.
- `sources/web-search.md` — accumulated "2026-08-15 attempted - `sources/web-search.md` — accumulated "2026-08-15 attempted
update — skipped" + "2026-08-17 attempted update — skipped" + update — skipped" + "2026-08-17 attempted update — skipped" +
"2026-08-18 attempted update — skipped" + "2026-08-19 attempted "2026-08-18 attempted update — skipped" + "2026-08-19 attempted
update — skipped" sections from the web-search-1 2026-08-15 + update — skipped" + "2026-08-20 attempted update — skipped"
web-search-1 2026-08-17 + web-search-1 2026-08-18 + web-search-1 sections from the web-search-1 2026-08-15 + web-search-1
2026-08-19 runs (5th + 6th + 7th + 8th consecutive skips on the 2026-08-17 + web-search-1 2026-08-18 + web-search-1 2026-08-19 +
same code path). web-search-1 2026-08-20 runs (5th + 6th + 7th + 8th + 9th
consecutive skips on the same code path).
- `sources/wikijs.md` — same `openwiki_generated: true` placeholder - `sources/wikijs.md` — same `openwiki_generated: true` placeholder
auto-applied during the 2026-08-15 daily update; **count data auto-applied during the 2026-08-15 daily update; **count data
wiped** by `2507925` 2026-08-15 sources-sync (Wiki.js went from wiped** by `2507925` 2026-08-15 sources-sync (Wiki.js went from
83 → 0 unique pages; ID range 22..1704 → 0..0) and the wipe 83 → 0 unique pages; ID range 22..1704 → 0..0) and the wipe
persists across the 4 subsequent sources-syncs. persists across the 5 subsequent sources-syncs (`997b648`
2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 +
`dcb53a2` 2026-08-19 + `bd30339` 2026-08-20).
- **Auth:** local path only — no remote, no credentials. - **Auth:** local path only — no remote, no credentials.
- **New file in this window:** `sources/openwiki-version-drift.md` - **New file in this window:** `sources/openwiki-version-drift.md`
was created in the 2026-08-17 daily update commit `5c70881` (auto- was created in the 2026-08-17 daily update commit `5c70881` (auto-
@@ -443,6 +459,8 @@ on the same paper.
| Date | Hash | Note | | Date | Hash | Note |
| --- | --- | --- | | --- | --- | --- |
| 2026-08-20 | `bd30339` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-20) — **count-data wipe re-applied** for the **sixth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` + 2026-08-19 `dcb53a2`); see Notable-entity § "2026-08-15 sources-sync bug" |
| 2026-08-20 | `a44f284` | chore: daily update 2026-08-20 (synthesis-layer edits accumulated from the prior HN-1 2026-08-20T18:00Z + web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z runs) |
| 2026-08-19 | `dcb53a2` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19) — **count-data wipe re-applied** for the **fifth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae`); see Notable-entity § "2026-08-15 sources-sync bug" | | 2026-08-19 | `dcb53a2` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19) — **count-data wipe re-applied** for the **fifth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae`); see Notable-entity § "2026-08-15 sources-sync bug" |
| 2026-08-19 | `7e904ec` | chore: daily update 2026-08-19 (synthesis-layer edits accumulated from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs + the prior `sources/openwiki-version-drift.md` carryover) | | 2026-08-19 | `7e904ec` | chore: daily update 2026-08-19 (synthesis-layer edits accumulated from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs + the prior `sources/openwiki-version-drift.md` carryover) |
| 2026-08-18 | `1fc73ae` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18) — **count-data wipe re-applied** for the **fourth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285`); see Notable-entity § "2026-08-15 sources-sync bug" | | 2026-08-18 | `1fc73ae` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18) — **count-data wipe re-applied** for the **fourth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285`); see Notable-entity § "2026-08-15 sources-sync bug" |
@@ -521,10 +539,11 @@ pipeline catches up.
| --- | --- | --- | | --- | --- | --- |
| 2026-08-15T18:07:49Z → 2026-08-17T18:09:32Z | HEAD `297f106d` → `a4fa5a32` (**7 new commits**: `0fc8db24` + `290e9635` + `24c713de` + `4073abf4` Quintard 2024 Nat Commun microfluidic vascularized organoid chip 4-commit LDR cycle + `2e6f5989` + `00f824f2` + `a4fa5a32` Guo 2026 Front Cell Dev Biol organoid ethics systematic review 3-commit LDR cycle — **first time since the 2026-07-28 / 2026-07-29 Parate / Lee / Hodge cluster that two new paper deep-reads landed on `main` in the same 48-hour window**) | HEAD `2507925` → `be49285` (**4 new commits**: `151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) | | 2026-08-15T18:07:49Z → 2026-08-17T18:09:32Z | HEAD `297f106d` → `a4fa5a32` (**7 new commits**: `0fc8db24` + `290e9635` + `24c713de` + `4073abf4` Quintard 2024 Nat Commun microfluidic vascularized organoid chip 4-commit LDR cycle + `2e6f5989` + `00f824f2` + `a4fa5a32` Guo 2026 Front Cell Dev Biol organoid ethics systematic review 3-commit LDR cycle — **first time since the 2026-07-28 / 2026-07-29 Parate / Lee / Hodge cluster that two new paper deep-reads landed on `main` in the same 48-hour window**) | HEAD `2507925` → `be49285` (**4 new commits**: `151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) |
| 2026-08-17T18:09:32Z → 2026-08-18T18:10:12Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity) | HEAD `be49285` → `1fc73ae` (**2 new automated commits**: `8127797` chore: daily update 2026-08-18 + `1fc73ae` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, the **fourth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern)) | | 2026-08-17T18:09:32Z → 2026-08-18T18:10:12Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity) | HEAD `be49285` → `1fc73ae` (**2 new automated commits**: `8127797` chore: daily update 2026-08-18 + `1fc73ae` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, the **fourth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern)) |
| 2026-08-19T18:08:24Z → 2026-08-20T18:09:15Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window for the **4th consecutive fetch**; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **4 calendar days stale**) | HEAD `dcb53a2` → `bd30339` (**2 new automated commits**: `a44f284` chore: daily update 2026-08-20 + `bd30339` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-20, the **sixth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + now `bd30339` 2026-08-20)) |
| 2026-08-18T18:10:12Z → 2026-08-19T18:08:24Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window for the **3rd consecutive fetch**; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **3 calendar days stale**) | HEAD `1fc73ae` → `dcb53a2` (**2 new automated commits**: `7e904ec` chore: daily update 2026-08-19 + `dcb53a2` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19, the **fifth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + now `dcb53a2` 2026-08-19)) | | 2026-08-18T18:10:12Z → 2026-08-19T18:08:24Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window for the **3rd consecutive fetch**; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **3 calendar days stale**) | HEAD `1fc73ae` → `dcb53a2` (**2 new automated commits**: `7e904ec` chore: daily update 2026-08-19 + `dcb53a2` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19, the **fifth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + now `dcb53a2` 2026-08-19)) |
| **Net new external evidence** | **2 new paper deep-reads** (from the 2026-08-15T18:07Z → 2026-08-17T18:09Z window): Quintard 2024 Nat Commun microfluidic vascularized organoid chip + Guo 2026 Front Cell Dev Biol organoid ethics systematic review. **2 new untracked directories** (from the same window): `celvivo_commercial/1331651_20260630_131201.pdf` (the 6-30 quote PDF migrated into a new folder) + `templates/类器官IRB申请清单.md` (the IRB application checklist derived from Guo 2026 — Robin's first customer-facing sales ammunition template produced from a single deep-read). The `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still untracked, carrying forward from the 2026-08-13 fetch (**8-day carry-forward** at the 2026-08-19T18:08Z fetch). **No new vault evidence in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window** | **1 new wiki file** (from the 2026-08-17 daily update `5c70881`): `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z). Synthesis-layer edits accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18 + HN-1 2026-08-19 + web-search-1 2026-08-15 + web-search-1 2026-08-17 + web-search-1 2026-08-18 + web-search-1 2026-08-19 + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + git-repo-1 2026-08-17 + git-repo-1 2026-08-18 + this git-repo-1 2026-08-19 runs are pending the next CLI commit cycle | | **Net new external evidence** | **2 new paper deep-reads** (from the 2026-08-15T18:07Z → 2026-08-17T18:09Z window): Quintard 2024 Nat Commun microfluidic vascularized organoid chip + Guo 2026 Front Cell Dev Biol organoid ethics systematic review. **2 new untracked directories** (from the same window): `celvivo_commercial/1331651_20260630_131201.pdf` (the 6-30 quote PDF migrated into a new folder) + `templates/类器官IRB申请清单.md` (the IRB application checklist derived from Guo 2026 — Robin's first customer-facing sales ammunition template produced from a single deep-read). The `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still untracked, carrying forward from the 2026-08-13 fetch (**9-day carry-forward** at the 2026-08-20T18:09Z fetch — was 8-day at the 2026-08-19T18:08Z fetch). **No new vault evidence in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window** | **1 new wiki file** (from the 2026-08-17 daily update `5c70881`): `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z). **Wiki-side**: the 2026-08-20T18:09Z fetch observed wiki HEAD bump `dcb53a2` → `bd30339` — 2 new automated wiki commits (`a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20 — the **sixth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern). Synthesis-layer edits accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18 + HN-1 2026-08-19 + HN-1 2026-08-20 + web-search-1 2026-08-15 + web-search-1 2026-08-17 + web-search-1 2026-08-18 + web-search-1 2026-08-19 + web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + git-repo-1 2026-08-17 + git-repo-1 2026-08-18 + git-repo-1 2026-08-19 + this git-repo-1 2026-08-20 runs are pending the next CLI commit cycle |
| Untracked → committed migrations | **Quintard 2024 file (4 commits)** + **Guo 2026 file (3 commits)** all moved from absent → committed on `main` (in the 2026-08-15T18:07Z → 2026-08-17T18:09Z window); **the 2 new untracked directories** are net-new in the same window. **None** in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window (vault silent) or the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window (vault silent for the 3rd consecutive fetch) | **2026-08-15T18:07Z → 2026-08-17T18:09Z window**: the `sources/index.md` from the 2026-08-15 dirty set was committed by the 2026-08-16 daily update `151d22b`; the remaining 9 dirty files are uncommitted synthesis edits accumulated across the prior HN-1 + web-search-1 + git-repo-1 runs. **2026-08-17T18:09Z → 2026-08-18T18:10Z window**: the `8127797` 2026-08-18 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-18T18:00Z + git-repo-1 2026-08-17T18:09Z runs (touching `commitments.md` + `index.md` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,literature,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/{01-organoid-equipment,05-robin-research}.md` per `git show --stat 8127797`); the 9 dirty files re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files. **2026-08-18T18:10Z → 2026-08-19T18:08Z window**: the `7e904ec` 2026-08-19 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs (touching `.last-update.json` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/05-robin-research.md` per `git show --stat 7e904ec`); the 10 dirty files (`.last-update.json` + `quickstart.md` + `sources/{README,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md`) re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-19T18:08Z run re-touch the same files. The 10 dirty files are awaiting the next CLI commit cycle | | Untracked → committed migrations | **Quintard 2024 file (4 commits)** + **Guo 2026 file (3 commits)** all moved from absent → committed on `main` (in the 2026-08-15T18:07Z → 2026-08-17T18:09Z window); **the 2 new untracked directories** are net-new in the same window. **None** in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window (vault silent) or the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window (vault silent for the 3rd consecutive fetch) or the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window (vault silent for the 4th consecutive fetch). | **2026-08-15T18:07Z → 2026-08-17T18:09Z window**: the `sources/index.md` from the 2026-08-15 dirty set was committed by the 2026-08-16 daily update `151d22b`; the remaining 9 dirty files are uncommitted synthesis edits accumulated across the prior HN-1 + web-search-1 + git-repo-1 runs. **2026-08-17T18:09Z → 2026-08-18T18:10Z window**: the `8127797` 2026-08-18 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-18T18:00Z + git-repo-1 2026-08-17T18:09Z runs (touching `commitments.md` + `index.md` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,literature,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/{01-organoid-equipment,05-robin-research}.md` per `git show --stat 8127797`); the 9 dirty files re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files. **2026-08-18T18:10Z → 2026-08-19T18:08Z window**: the `7e904ec` 2026-08-19 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs (touching `.last-update.json` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/05-robin-research.md` per `git show --stat 7e904ec`); the 10 dirty files (`.last-update.json` + `quickstart.md` + `sources/{README,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md`) re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-19T18:08Z run re-touch the same files. **2026-08-19T18:08Z → 2026-08-20T18:09Z window**: the `a44f284` 2026-08-20 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-20T18:00Z + web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z runs; the 10 dirty files re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-20T18:09Z run re-touch the same files. The 10 dirty files are awaiting the next CLI commit cycle |
| **Operational issue carried over from prior runs** | n/a | **`2507925` 2026-08-15 sources-sync bug** + the 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` + 2026-08-19 `dcb53a2` sources-syncs (which re-applied the same operational pattern as `2507925` — NocoDB / Wiki.js / RAGFlow count values stayed zero across all **5** sources-syncs). The on-disk `~/.openwiki/connectors/web-search/config.json` is unaffected — this is a wiki-side CRON issue with the auto-source-sync job, not a connector config issue. Recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page. The data is recoverable from `git show 8ddc6d9:sources/nocodb.md` etc. for any future recovery commit | | **Operational issue carried over from prior runs** | n/a | **`2507925` 2026-08-15 sources-sync bug** + the 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` + 2026-08-19 `dcb53a2` + 2026-08-20 `bd30339` sources-syncs (which re-applied the same operational pattern as `2507925` — NocoDB / Wiki.js / RAGFlow count values stayed zero across all **6** sources-syncs). The on-disk `~/.openwiki/connectors/web-search/config.json` is unaffected — this is a wiki-side CRON issue with the auto-source-sync job, not a connector config issue. Recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page. The data is recoverable from `git show 8ddc6d9:sources/nocodb.md` etc. for any future recovery commit |
## Vault navigation index ## Vault navigation index
@@ -577,8 +596,8 @@ Markdown file counts per deep-read subfolder:
| `Microbioreactor/` | 1 (new as of 2026-08-07 — Rosero 2026 Front Bioeng Biotechnol) | | `Microbioreactor/` | 1 (new as of 2026-08-07 — Rosero 2026 Front Bioeng Biotechnol) |
| `Cells/` | 1 (new as of 2026-08-08 — Fernandez Vallone 2026 Cells THSDC) | | `Cells/` | 1 (new as of 2026-08-08 — Fernandez Vallone 2026 Cells THSDC) |
| `Review/` | 1 (new as of 2026-08-13 — Zhou 2023 computer vision + microfluidics, **untracked**, **8-day carry-forward** at 2026-08-19 fetch, **6 fetches silent** — structural signal continuing to weaken) | | `Review/` | 1 (new as of 2026-08-13 — Zhou 2023 computer vision + microfluidics, **untracked**, **8-day carry-forward** at 2026-08-19 fetch, **6 fetches silent** — structural signal continuing to weaken) |
| `templates/` | 1 (new as of 2026-08-17 — `类器官IRB申请清单.md`, derived from the Guo 2026 ethics deep-read; Robin's first customer-facing template produced from a single deep-read, **untracked**, **3-day carry-forward** at 2026-08-19 fetch) | | `templates/` | 1 (new as of 2026-08-17 — `类器官IRB申请清单.md`, derived from the Guo 2026 ethics deep-read; Robin's first customer-facing template produced from a single deep-read, **untracked**, **4-day carry-forward** at 2026-08-20 fetch (was 3-day at 2026-08-19) |
| `celvivo_commercial/` | 1 (new as of 2026-08-17 — `1331651_20260630_131201.pdf`, the 6-30 quote PDF migrated into a new folder, **untracked**, **3-day carry-forward** at 2026-08-19 fetch) | | `celvivo_commercial/` | 1 (new as of 2026-08-17 — `1331651_20260630_131201.pdf`, the 6-30 quote PDF migrated into a new folder, **untracked**, **4-day carry-forward** at 2026-08-20 fetch (was 3-day at 2026-08-19) |
Total ≈ 1,207 deep-read notes on `main` (+2 from the 2026-08-16 Quintard 2024 + Guo 2026 clusters). Total ≈ 1,207 deep-read notes on `main` (+2 from the 2026-08-16 Quintard 2024 + Guo 2026 clusters).
Review/ zhou2023 computer vision + microfluidics, **untracked** — only Review/ zhou2023 computer vision + microfluidics, **untracked** — only
@@ -646,9 +665,9 @@ fields still 待补).
- **Quintard 2024 Nat Commun microfluidic vascularized organoid chip (2026-08-16, 7 commits in 48-hour window)** — `obsidian-vault/Literature/Deep-Reads/Organoid/quintard_2024_vasorganoid_chip.md` (189 lines; 4-commit LDR cycle `0fc8db24` adds → `290e9635` -v2 修图床/双 H1/落款 → `24c713de` -v3 Wiki.js 自带图床 6 张图 → `4073abf4` -v4 转发语标题/落款加粗/删 3Brain; Wiki IDs 1719/1720/1722, NocoDB Id 3297). The paper is **the first microfluidic / organ-on-chip platform paper** Robin has deep-read in the 2026-08 window; the platform combines (i) 10-channel parallel microfluidic chips with U-shaped capture sites (300-800 µm adjustable), (ii) fibrin + Matrigel hydrogel layer deposition using Landau-Levich-Bretherton effect, (iii) ~10 s capture efficiency ~100%, (iv) dynamic perfusion 7-30 days with HUVEC + fibroblast co-culture + hiPSC-derived BVO + islet spheroid + lung organoid cross-validation, (v) hierarchical vasculature (37 µm upstream artery-vein + 8 µm BVO capillaries, matching physiological ranges 50-1900 s⁻¹). **Net-new external evidence** in this run (git-repo-1 2026-08-17). The 4-star "与我们的产品" table lists **Mimetas OrganoPlate ⭐⭐⭐⭐** (direct Phaseguide-based vascularized / kidney / intestine organ-on-chip competitor) + **CelVivo ClinoStar ⭐⭐⭐** (upstream workflow step: BVO differentiation day 0-15 needs rotating-wall suspension culture; ClinoStar is the canonical hardware for this stage; the paper's day 15 → chip-on-board handoff is the canonical CelVivo → organ-on-chip workflow) + **Emulate Organ-Chip ⭐⭐⭐** (Colon-Intestine-Liver platform companion). Synthesis routes into `/themes/05-robin-research.md` (新增 by-vendor entry) and `/sources/literature.md` (last-30-days deep-read table). Vendor-anchor mapping: CelVivo-adjacent (workflow upstream) + Mimetas OrganoPlate / Emulate Organ-Chip (organ-on-chip product lane that Robin's portfolio does not currently cover but represents a potential cross-sell if Robin's customers ask "where do I run my CelVivo-matured organoids in a vascularized microenvironment?"). Customer-entry: 药企临床前 (vascularized drug screening) + 微流控 organ-on-chip 平台集成商 (Mimetas / Emulate channel partners) + academic PI (vascular development / diabetes). **Track on next fetch** whether Robin publishes a `/sources/literature-quintard-2024-nat-commun-vasorganoid-chip-deepread.md` synthesis page; the deep-read pipeline currently only carries `liang-2026-celvivo-clinostar-positioning` + `miao-2025-celvivo-clinostar-positioning` + `liu-2026-hd-mea-roadmap-implication` + `sharma-2026-retinal-organoid-mea-cross-sell` — no Quintard synthesis page yet. - **Quintard 2024 Nat Commun microfluidic vascularized organoid chip (2026-08-16, 7 commits in 48-hour window)** — `obsidian-vault/Literature/Deep-Reads/Organoid/quintard_2024_vasorganoid_chip.md` (189 lines; 4-commit LDR cycle `0fc8db24` adds → `290e9635` -v2 修图床/双 H1/落款 → `24c713de` -v3 Wiki.js 自带图床 6 张图 → `4073abf4` -v4 转发语标题/落款加粗/删 3Brain; Wiki IDs 1719/1720/1722, NocoDB Id 3297). The paper is **the first microfluidic / organ-on-chip platform paper** Robin has deep-read in the 2026-08 window; the platform combines (i) 10-channel parallel microfluidic chips with U-shaped capture sites (300-800 µm adjustable), (ii) fibrin + Matrigel hydrogel layer deposition using Landau-Levich-Bretherton effect, (iii) ~10 s capture efficiency ~100%, (iv) dynamic perfusion 7-30 days with HUVEC + fibroblast co-culture + hiPSC-derived BVO + islet spheroid + lung organoid cross-validation, (v) hierarchical vasculature (37 µm upstream artery-vein + 8 µm BVO capillaries, matching physiological ranges 50-1900 s⁻¹). **Net-new external evidence** in this run (git-repo-1 2026-08-17). The 4-star "与我们的产品" table lists **Mimetas OrganoPlate ⭐⭐⭐⭐** (direct Phaseguide-based vascularized / kidney / intestine organ-on-chip competitor) + **CelVivo ClinoStar ⭐⭐⭐** (upstream workflow step: BVO differentiation day 0-15 needs rotating-wall suspension culture; ClinoStar is the canonical hardware for this stage; the paper's day 15 → chip-on-board handoff is the canonical CelVivo → organ-on-chip workflow) + **Emulate Organ-Chip ⭐⭐⭐** (Colon-Intestine-Liver platform companion). Synthesis routes into `/themes/05-robin-research.md` (新增 by-vendor entry) and `/sources/literature.md` (last-30-days deep-read table). Vendor-anchor mapping: CelVivo-adjacent (workflow upstream) + Mimetas OrganoPlate / Emulate Organ-Chip (organ-on-chip product lane that Robin's portfolio does not currently cover but represents a potential cross-sell if Robin's customers ask "where do I run my CelVivo-matured organoids in a vascularized microenvironment?"). Customer-entry: 药企临床前 (vascularized drug screening) + 微流控 organ-on-chip 平台集成商 (Mimetas / Emulate channel partners) + academic PI (vascular development / diabetes). **Track on next fetch** whether Robin publishes a `/sources/literature-quintard-2024-nat-commun-vasorganoid-chip-deepread.md` synthesis page; the deep-read pipeline currently only carries `liang-2026-celvivo-clinostar-positioning` + `miao-2025-celvivo-clinostar-positioning` + `liu-2026-hd-mea-roadmap-implication` + `sharma-2026-retinal-organoid-mea-cross-sell` — no Quintard synthesis page yet.
- **Guo 2026 Front Cell Dev Biol organoid ethics systematic review (2026-08-16, 7 commits in 48-hour window)** — `obsidian-vault/Literature/Deep-Reads/Organoid/guo_2026_organoid_ethical_review.md` (170 lines + 3 真图; 3-commit LDR cycle `2e6f5989` adds → `00f824f2` -v2 修图床 (加 2 张 Wiki.js 自带图) → `a4fa5a32` -v3 补 Fig 1; Wiki ID 1724, NocoDB Id 3298). The paper is **the first organoid-research ethics / IRB systematic review** Robin has deep-read in any window — fills the methodological gap on the IRB-side that the prior clinical-translation evidence (CDE classification + Order No. 818) does not directly cover. The paper structures the IRB review framework as **7 mandatory points** (sample provenance + donor informed consent + data privacy & de-identification + co-culture agency + animal welfare 3R + cross-border regulation + long-term storage & termination); the cross-border table compares China (《人类遗传资源管理条例》+ 《涉及人的生命科学和医学研究伦理审查办法》2023), US (HIPAA + Common Rule + NIH GDS), EU (GDPR + Clinical Trials Regulation 536/2014), Japan, Korea. The 4-star "与我们的产品" table lists **CelVivo ClinoStar ⭐⭐⭐⭐** (clinical-translation IRB compliance — the 7 mandatory points directly apply to ClinoStar customer IRB submissions; **Robin 推广 ClinoStar 给三甲医院时, 可附带本框架作为增值**) + **Mimetas OrganoPlate ⭐⭐⭐⭐** (co-culture ethics — Mimetas 主营类器官 + 免疫细胞共培养, the co-culture agency framework from Guo 2026 point 4 directly applies) + **Emulate Organ-Chip ⭐⭐⭐** (organoid + microfluidic cross-border regulation reference). **Net-new external evidence** in this run (git-repo-1 2026-08-17). Robin translated the paper into a **customer-facing sales ammunition template** at `templates/类器官IRB申请清单.md` (180 lines; 7 mandatory points checklist + 5 customer Q&A + China vs International flow table + 10 attachments + 7 citations; v1.0 dated 2026-08-16, "Robin 8-16 实战沉淀") — see the templates/ entry in the next bullet. Customer-entry: 临床转化型医院 (class A tertiary hospitals running organoid IRB submissions) + 类器官厂家 Robin 培训客户 (the IRB checklist is the canonical "Robin 培训客户 IRB 申请" core material) + academic PI (cross-border collaboration IRB paperwork). **Track on next fetch** whether (a) the templates/ IRB checklist gets committed, (b) the Robin-author attribution in the template is recognized as a wiki-side customer-training artifact, (c) Robin produces a deep-read synthesis page at `/sources/literature-guo-2026-front-cell-dev-biol-organoid-ethics-deepread.md`, and (d) the IRB checklist routes into the existing CelVivo industrial-customers program (which currently lives at `05-Documents/Products/Celvivo/Industrial-Customers/`) as a standard customer-training artifact. - **Guo 2026 Front Cell Dev Biol organoid ethics systematic review (2026-08-16, 7 commits in 48-hour window)** — `obsidian-vault/Literature/Deep-Reads/Organoid/guo_2026_organoid_ethical_review.md` (170 lines + 3 真图; 3-commit LDR cycle `2e6f5989` adds → `00f824f2` -v2 修图床 (加 2 张 Wiki.js 自带图) → `a4fa5a32` -v3 补 Fig 1; Wiki ID 1724, NocoDB Id 3298). The paper is **the first organoid-research ethics / IRB systematic review** Robin has deep-read in any window — fills the methodological gap on the IRB-side that the prior clinical-translation evidence (CDE classification + Order No. 818) does not directly cover. The paper structures the IRB review framework as **7 mandatory points** (sample provenance + donor informed consent + data privacy & de-identification + co-culture agency + animal welfare 3R + cross-border regulation + long-term storage & termination); the cross-border table compares China (《人类遗传资源管理条例》+ 《涉及人的生命科学和医学研究伦理审查办法》2023), US (HIPAA + Common Rule + NIH GDS), EU (GDPR + Clinical Trials Regulation 536/2014), Japan, Korea. The 4-star "与我们的产品" table lists **CelVivo ClinoStar ⭐⭐⭐⭐** (clinical-translation IRB compliance — the 7 mandatory points directly apply to ClinoStar customer IRB submissions; **Robin 推广 ClinoStar 给三甲医院时, 可附带本框架作为增值**) + **Mimetas OrganoPlate ⭐⭐⭐⭐** (co-culture ethics — Mimetas 主营类器官 + 免疫细胞共培养, the co-culture agency framework from Guo 2026 point 4 directly applies) + **Emulate Organ-Chip ⭐⭐⭐** (organoid + microfluidic cross-border regulation reference). **Net-new external evidence** in this run (git-repo-1 2026-08-17). Robin translated the paper into a **customer-facing sales ammunition template** at `templates/类器官IRB申请清单.md` (180 lines; 7 mandatory points checklist + 5 customer Q&A + China vs International flow table + 10 attachments + 7 citations; v1.0 dated 2026-08-16, "Robin 8-16 实战沉淀") — see the templates/ entry in the next bullet. Customer-entry: 临床转化型医院 (class A tertiary hospitals running organoid IRB submissions) + 类器官厂家 Robin 培训客户 (the IRB checklist is the canonical "Robin 培训客户 IRB 申请" core material) + academic PI (cross-border collaboration IRB paperwork). **Track on next fetch** whether (a) the templates/ IRB checklist gets committed, (b) the Robin-author attribution in the template is recognized as a wiki-side customer-training artifact, (c) Robin produces a deep-read synthesis page at `/sources/literature-guo-2026-front-cell-dev-biol-organoid-ethics-deepread.md`, and (d) the IRB checklist routes into the existing CelVivo industrial-customers program (which currently lives at `05-Documents/Products/Celvivo/Industrial-Customers/`) as a standard customer-training artifact.
- **Review/ subfolder — first entry (2026-08-13, still uncommitted at 2026-08-19, 8-day carry-forward, watchlist signal continuing to weaken)** — `obsidian-vault/04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` is the **first file in a new `Review/` subfolder** under `04-Literature/Deep-Reads/`. The file is **untracked** at the 2026-08-19 fetch (Robin has not yet committed it — same state as the 2026-08-13 + 2026-08-15 + 2026-08-17 + 2026-08-18 fetches, **0 progress in the 2026-08-13 → 2026-08-19 144-hour window**, **6 consecutive fetches silent on the file**). **Watchlist signal continuing to weaken at this fetch**: per the 2026-08-15 watchlist-trigger rubric ("if the file remains uncommitted at the next fetch (2026-08-17 or later), the structural signal weakens"), the `Review/` subfolder at the 2026-08-19 fetch is **still single-entry, still untracked** — the structural signal **continues to weaken** at this fetch (**8-day carry-forward** with no commit, no follow-up paper landed in the subfolder across **6 consecutive fetches**). The `Review/` subfolder is more likely to be a one-off than a recurring pattern. The file should either be committed on a future fetch (which would re-strengthen the signal) or remain untracked indefinitely (which would confirm the one-off interpretation). No synthesis routes until the file is committed. - **Review/ subfolder — first entry (2026-08-13, still uncommitted at 2026-08-20, 9-day carry-forward, watchlist signal continuing to weaken)** — `obsidian-vault/04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` is the **first file in a new `Review/` subfolder** under `04-Literature/Deep-Reads/`. The file is **untracked** at the 2026-08-20 fetch (Robin has not yet committed it — same state as the 2026-08-13 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 fetches, **0 progress in the 2026-08-13 → 2026-08-20 168-hour window**, **7 consecutive fetches silent on the file**). **Watchlist signal continuing to weaken at this fetch**: per the 2026-08-15 watchlist-trigger rubric ("if the file remains uncommitted at the next fetch (2026-08-17 or later), the structural signal weakens"), the `Review/` subfolder at the 2026-08-20 fetch is **still single-entry, still untracked** — the structural signal **continues to weaken** at this fetch (**9-day carry-forward** with no commit, no follow-up paper landed in the subfolder across **7 consecutive fetches**). The `Review/` subfolder is more likely to be a one-off than a recurring pattern. The file should either be committed on a future fetch (which would re-strengthen the signal) or remain untracked indefinitely (which would confirm the one-off interpretation). No synthesis routes until the file is committed.
- **`templates/` subfolder — first entry (2026-08-16, NEW this run)** — `templates/类器官IRB申请清单.md` (180 lines, mtime 2026-08-16, untracked) is the **first file in a new `templates/` directory** at the vault root. The file is Robin's **first customer-facing sales ammunition template produced from a single deep-read** (the Guo 2026 IRB ethics systematic review). Content: 7 mandatory IRB review points checklist (样本来源/知情同意/数据隐私/共培养主体性/3R 动物福利/跨境监管/长期保存与终止使用) + 5 customer Q&A ("类器官研究要不要 IRB 申请?" / "类器官共培养产品怎么申请 IRB?" / "类器官跨境研究怎么报?" / "3R 原则怎么写?" / "类器官 + 免疫细胞共培养 = CAR-T 体外培养, 算不算新生物体? 伦理上算什么?") + China vs International flow comparison table + 10-row 申请附件清单 + 7 references (Guo 2026 + ISSCR 2021 + OHRP 2016 + GDPR 2018 + China 2023 + China 2019 + Cambridge 2020). The template's `version: v1.0 (2026-08-16, Robin 8-16 实战沉淀)` and `Robin 业务定位: 类器官厂家给三甲医院 IRB 申请的标准模板 + Robin 客户培训材料核心` framing makes it explicit that this is the canonical "Robin 培训客户 IRB 申请" core material. **Structural significance**: the `templates/` directory is new — none of the existing top-level folders (`01-Active-Sales/` / `02-Clients/` / `02-Active-Deals/` / `02-Contacts/` / `03-Product/` / `03-Resources/` / `04-Literature/` / `05-Documents/` / `06-Sales/` / `99-Templates/` / `memory/`) provides a vendor-agnostic customer-training-artifact slot at the vault root. The Obsidian vault already has `99-Templates/` for reusable Obsidian templates (note templates, daily-report templates — per `99-Templates/` size hint 14 .md), but the new `templates/` directory is **for customer-facing sales ammunition**, not Obsidian note templates — a different artifact type. The naming convention overlaps with `99-Templates/` and may need disambiguation; Robin's intent (per the file header) is for this `templates/` to be the **canonical customer-training artifact directory**, distinct from `99-Templates/` Obsidian-note templates. **Customer-entry scenarios** called out in the template: (a) 类器官厂家研发负责人 = IRB 申请准备, (b) Robin 客户开发 = 培训客户 IRB 申请核心材料, (c) 医院 IRB 委员会 = 类器官研究 IRB 审查标准参考, (d) 学术合作方 = 跨境合作时多国法规差异对照. **Carry-forward status** (2026-08-19): untracked, **3-day carry-forward** since first observation (2026-08-17 fetch), future-commit candidate. **Track on next fetch** whether (a) Robin commits the file to `main`, (b) more templates land in the directory (extending the customer-training-artifact slot), (c) the `templates/` and `99-Templates/` naming overlap gets resolved (rename / docs / conventions). Synthesis routes into `/themes/05-robin-research.md` (sales ammunition pipeline section). - **`templates/` subfolder — first entry (2026-08-16, NEW this run)** — `templates/类器官IRB申请清单.md` (180 lines, mtime 2026-08-16, untracked) is the **first file in a new `templates/` directory** at the vault root. The file is Robin's **first customer-facing sales ammunition template produced from a single deep-read** (the Guo 2026 IRB ethics systematic review). Content: 7 mandatory IRB review points checklist (样本来源/知情同意/数据隐私/共培养主体性/3R 动物福利/跨境监管/长期保存与终止使用) + 5 customer Q&A ("类器官研究要不要 IRB 申请?" / "类器官共培养产品怎么申请 IRB?" / "类器官跨境研究怎么报?" / "3R 原则怎么写?" / "类器官 + 免疫细胞共培养 = CAR-T 体外培养, 算不算新生物体? 伦理上算什么?") + China vs International flow comparison table + 10-row 申请附件清单 + 7 references (Guo 2026 + ISSCR 2021 + OHRP 2016 + GDPR 2018 + China 2023 + China 2019 + Cambridge 2020). The template's `version: v1.0 (2026-08-16, Robin 8-16 实战沉淀)` and `Robin 业务定位: 类器官厂家给三甲医院 IRB 申请的标准模板 + Robin 客户培训材料核心` framing makes it explicit that this is the canonical "Robin 培训客户 IRB 申请" core material. **Structural significance**: the `templates/` directory is new — none of the existing top-level folders (`01-Active-Sales/` / `02-Clients/` / `02-Active-Deals/` / `02-Contacts/` / `03-Product/` / `03-Resources/` / `04-Literature/` / `05-Documents/` / `06-Sales/` / `99-Templates/` / `memory/`) provides a vendor-agnostic customer-training-artifact slot at the vault root. The Obsidian vault already has `99-Templates/` for reusable Obsidian templates (note templates, daily-report templates — per `99-Templates/` size hint 14 .md), but the new `templates/` directory is **for customer-facing sales ammunition**, not Obsidian note templates — a different artifact type. The naming convention overlaps with `99-Templates/` and may need disambiguation; Robin's intent (per the file header) is for this `templates/` to be the **canonical customer-training artifact directory**, distinct from `99-Templates/` Obsidian-note templates. **Customer-entry scenarios** called out in the template: (a) 类器官厂家研发负责人 = IRB 申请准备, (b) Robin 客户开发 = 培训客户 IRB 申请核心材料, (c) 医院 IRB 委员会 = 类器官研究 IRB 审查标准参考, (d) 学术合作方 = 跨境合作时多国法规差异对照. **Carry-forward status** (2026-08-20): untracked, **4-day carry-forward** since first observation (2026-08-17 fetch — was 3-day at the 2026-08-19 fetch), future-commit candidate. **Track on next fetch** whether (a) Robin commits the file to `main`, (b) more templates land in the directory (extending the customer-training-artifact slot), (c) the `templates/` and `99-Templates/` naming overlap gets resolved (rename / docs / conventions). Synthesis routes into `/themes/05-robin-research.md` (sales ammunition pipeline section).
- **`celvivo_commercial/` subfolder — first entry (2026-08-17, NEW this run)** — `celvivo_commercial/1331651_20260630_131201.pdf` (56 KB PDF, mtime 2026-08-17, untracked) is the **first file in a new `celvivo_commercial/` directory** at the vault root. The PDF is the existing 6-30 quote PDF that Robin migrated into a new folder. The file is **a quote PDF**, not a synthesis target — the on-disk evidence is the existing 6-30 quote document that already exists in `05-Documents/Products/Celvivo/Industrial-Customers/` (per the 2026-08-15 synthesis-policy section above, "commercial docs (8 files: Exhibit 1 Price Book / Exhibit 3 SuperUser certification / Huibai demo discount agreement / 惠百 PO 盖章版 / Celvivo Distribution Agreement 2026 Huibai Bio / 1331651_20260630_131201 (6-30 quote) / Packing Slip Ordre 726_1 / Packing Slip Ordre 726_2)"). **Structural significance**: the `celvivo_commercial/` directory is new — Robin has migrated the 6-30 quote out of wherever it was previously (presumably a working folder or `05-Documents/Products/Celvivo/` deep path) into a top-level dedicated directory. **The migration is unfinished** — only 1 file in the new directory; if Robin intends the directory to consolidate all 8 commercial docs from `05-Documents/Products/Celvivo/Industrial-Customers/`, the other 7 files (Exhibit 1 Price Book / Exhibit 3 SuperUser certification / Huibai demo discount agreement / 惠百 PO 盖章版 / Celvivo Distribution Agreement 2026 / Packing Slip Ordre 726_1 / Packing Slip Ordre 726_2) should eventually land here too. **No synthesis routes** until Robin commits the file or migrates more docs into the directory. Carry-forward status (2026-08-19): untracked, single-entry, **3-day carry-forward** since first observation (2026-08-17 fetch), future-commit candidate. Track on next fetch whether (a) the file gets committed, (b) more commercial docs migrate into the directory. - **`celvivo_commercial/` subfolder — first entry (2026-08-17, NEW this run)** — `celvivo_commercial/1331651_20260630_131201.pdf` (56 KB PDF, mtime 2026-08-17, untracked) is the **first file in a new `celvivo_commercial/` directory** at the vault root. The PDF is the existing 6-30 quote PDF that Robin migrated into a new folder. The file is **a quote PDF**, not a synthesis target — the on-disk evidence is the existing 6-30 quote document that already exists in `05-Documents/Products/Celvivo/Industrial-Customers/` (per the 2026-08-15 synthesis-policy section above, "commercial docs (8 files: Exhibit 1 Price Book / Exhibit 3 SuperUser certification / Huibai demo discount agreement / 惠百 PO 盖章版 / Celvivo Distribution Agreement 2026 Huibai Bio / 1331651_20260630_131201 (6-30 quote) / Packing Slip Ordre 726_1 / Packing Slip Ordre 726_2)"). **Structural significance**: the `celvivo_commercial/` directory is new — Robin has migrated the 6-30 quote out of wherever it was previously (presumably a working folder or `05-Documents/Products/Celvivo/` deep path) into a top-level dedicated directory. **The migration is unfinished** — only 1 file in the new directory; if Robin intends the directory to consolidate all 8 commercial docs from `05-Documents/Products/Celvivo/Industrial-Customers/`, the other 7 files (Exhibit 1 Price Book / Exhibit 3 SuperUser certification / Huibai demo discount agreement / 惠百 PO 盖章版 / Celvivo Distribution Agreement 2026 / Packing Slip Ordre 726_1 / Packing Slip Ordre 726_2) should eventually land here too. **No synthesis routes** until Robin commits the file or migrates more docs into the directory. Carry-forward status (2026-08-20): untracked, single-entry, **4-day carry-forward** since first observation (2026-08-17 fetch — was 3-day at the 2026-08-19 fetch), future-commit candidate. Track on next fetch whether (a) the file gets committed, (b) more commercial docs migrate into the directory.
- **2026-08-15 sources-sync bug — count-data wipe (operational)** — the `2507925e27b83b4f9d2e6f3b9c939d081a90f9f2` `chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-15)` commit at 2026-08-15 +0800 02:31 committed **empty count values** for NocoDB / Wiki.js / RAGFlow (SeaFile was already empty so the commit was a no-op there): (a) NocoDB: 6614 → **0** total records, with all 13 per-table counts (brain_organoid_literature / intestinal_organoid_literature / Celvivo_literature / cardiac_organoid_literature / cancer_organoid_literature / liver_organoid_literature / other_organoid_literature / kidney_organoid_literature / retinal_organoid_literature / Cellink_literature / organoid_literature_old / lung_organoid_literature / 3Brain_literature) cleared to empty cells; (b) SeaFile: libraries table unchanged (was empty in `1737454` already — a separate, older cron issue not introduced by `2507925`); (c) Wiki.js: 83 → **0** unique pages, ID range 22..1704 → **0..0**, Locale 分布 → empty, Top-level 路径分布 → empty; (d) RAGFlow: landing 200 → **000**, `/api/v1/health` 404 → **000**, `/api/v1/datasets` 401 → **000**. The header lines on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page still report `上次同步: 2026-08-14T18:30:42Z` (the prior successful sync timestamp), but the body count values are wiped. **Probable root cause**: the auto-source-sync CRON job ran but the underlying NocoDB / Wiki.js / RAGFlow API calls failed (likely the same operational issue already documented on `/sources/web-search.md` and `/sources/README.md` — runtime registry disagreement on `enabled: true` vs. disabled); the script committed the empty values instead of skipping the commit on failure. **Impact**: 3 source pages now show misleading zero/null values (NocoDB / Wiki.js / RAGFlow); Tavily / HN / git-repo synthesis is unaffected. **Recovery**: the wiped data is recoverable from the prior wiki commit (`git show 1737454:sources/nocodb.md` etc. will restore the pre-wipe state). This run restored the wiped data on all 3 affected pages (plus an operational note documenting the bug) so the wiki is internally consistent again. **Wiki-synthesis concern**: **none** — the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters. **Operational concern**: **yes** — the auto-source-sync job should (a) check connectivity before committing, (b) skip the commit on API failure rather than committing empty values, or (c) preserve the prior counter values when a fresh pull returns null/empty. Recorded for traceability here + on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page. - **2026-08-15 sources-sync bug — count-data wipe (operational)** — the `2507925e27b83b4f9d2e6f3b9c939d081a90f9f2` `chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-15)` commit at 2026-08-15 +0800 02:31 committed **empty count values** for NocoDB / Wiki.js / RAGFlow (SeaFile was already empty so the commit was a no-op there): (a) NocoDB: 6614 → **0** total records, with all 13 per-table counts (brain_organoid_literature / intestinal_organoid_literature / Celvivo_literature / cardiac_organoid_literature / cancer_organoid_literature / liver_organoid_literature / other_organoid_literature / kidney_organoid_literature / retinal_organoid_literature / Cellink_literature / organoid_literature_old / lung_organoid_literature / 3Brain_literature) cleared to empty cells; (b) SeaFile: libraries table unchanged (was empty in `1737454` already — a separate, older cron issue not introduced by `2507925`); (c) Wiki.js: 83 → **0** unique pages, ID range 22..1704 → **0..0**, Locale 分布 → empty, Top-level 路径分布 → empty; (d) RAGFlow: landing 200 → **000**, `/api/v1/health` 404 → **000**, `/api/v1/datasets` 401 → **000**. The header lines on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page still report `上次同步: 2026-08-14T18:30:42Z` (the prior successful sync timestamp), but the body count values are wiped. **Probable root cause**: the auto-source-sync CRON job ran but the underlying NocoDB / Wiki.js / RAGFlow API calls failed (likely the same operational issue already documented on `/sources/web-search.md` and `/sources/README.md` — runtime registry disagreement on `enabled: true` vs. disabled); the script committed the empty values instead of skipping the commit on failure. **Impact**: 3 source pages now show misleading zero/null values (NocoDB / Wiki.js / RAGFlow); Tavily / HN / git-repo synthesis is unaffected. **Recovery**: the wiped data is recoverable from the prior wiki commit (`git show 1737454:sources/nocodb.md` etc. will restore the pre-wipe state). This run restored the wiped data on all 3 affected pages (plus an operational note documenting the bug) so the wiki is internally consistent again. **Wiki-synthesis concern**: **none** — the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters. **Operational concern**: **yes** — the auto-source-sync job should (a) check connectivity before committing, (b) skip the commit on API failure rather than committing empty values, or (c) preserve the prior counter values when a fresh pull returns null/empty. Recorded for traceability here + on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page.
- **Liang 2026 liver organoid fibrosis platform (2026-08-12)** — `04-Literature/Deep-Reads/Liver/2026-08-12_Liang_2026_SciRep_liver_organoid_fibrosis_platform.md` (170 lines; `[[MOC-类器官与3D培养]]` already names this paper via `related:` back-link). The paper is **the net-new external evidence** this run (git-repo-1 2026-08-12) brought into the vault; see synthesis at `/themes/01-organoid-equipment.md` § CelVivo evidence (added 2026-08-12) and `/commitments.md` `liang-2026-celvivo-clinostar-positioning`. Single-paper LDR cycle: 4 commits (`e542c977` → `8699a154` → `aacba7aa` → `297f106d`) walked Robin's standard 3-stage SOP on the same file (186 lines → 105+/122- page 946 rewrite → page 934 修齐 micro-revisions). The 4-star "与我们的产品" table on the paper lists **CelVivo ClinoStar ⭐⭐⭐⭐** (P1-P10 长程扩增对应旋转培养 30+ 天无剪切; HSC 静止态在模拟微重力下 7+ 天维持) + **CelVivo ClinoReactor ⭐⭐⭐⭐** (单组织 3 轨道分通道灌流; TGFβ 时间程序精确切换) — **parallel CelVivo ClinoStar rating 5 to Miao 2025 v2's ClinoStar rating 5** from the 2026-08-08 flywheel-sync, but for liver organoid (long-term maturation + fibrosis modeling) rather than lung organoid (vascularization). 7 SeaFile Fig (Fig1-7) + 4-paper 参考文献 (Huch 2013 / Huch 2015 / Clevers 2016). Customer-entry: 药企临床前 (抗纤维化药筛) + 临床肝活检中心 (1-2 mg → 3 周药敏) + 学术 PI (2D vs 3D 旋转 efficiency). **MOC linkage**: the paper's `related:` field already names `[[MOC-类器官与3D培养]]` (the first MOC, created 2026-08-10) — confirming the MOC pattern is in active use on real deep-reads. - **Liang 2026 liver organoid fibrosis platform (2026-08-12)** — `04-Literature/Deep-Reads/Liver/2026-08-12_Liang_2026_SciRep_liver_organoid_fibrosis_platform.md` (170 lines; `[[MOC-类器官与3D培养]]` already names this paper via `related:` back-link). The paper is **the net-new external evidence** this run (git-repo-1 2026-08-12) brought into the vault; see synthesis at `/themes/01-organoid-equipment.md` § CelVivo evidence (added 2026-08-12) and `/commitments.md` `liang-2026-celvivo-clinostar-positioning`. Single-paper LDR cycle: 4 commits (`e542c977` → `8699a154` → `aacba7aa` → `297f106d`) walked Robin's standard 3-stage SOP on the same file (186 lines → 105+/122- page 946 rewrite → page 934 修齐 micro-revisions). The 4-star "与我们的产品" table on the paper lists **CelVivo ClinoStar ⭐⭐⭐⭐** (P1-P10 长程扩增对应旋转培养 30+ 天无剪切; HSC 静止态在模拟微重力下 7+ 天维持) + **CelVivo ClinoReactor ⭐⭐⭐⭐** (单组织 3 轨道分通道灌流; TGFβ 时间程序精确切换) — **parallel CelVivo ClinoStar rating 5 to Miao 2025 v2's ClinoStar rating 5** from the 2026-08-08 flywheel-sync, but for liver organoid (long-term maturation + fibrosis modeling) rather than lung organoid (vascularization). 7 SeaFile Fig (Fig1-7) + 4-paper 参考文献 (Huch 2013 / Huch 2015 / Clevers 2016). Customer-entry: 药企临床前 (抗纤维化药筛) + 临床肝活检中心 (1-2 mg → 3 周药敏) + 学术 PI (2D vs 3D 旋转 efficiency). **MOC linkage**: the paper's `related:` field already names `[[MOC-类器官与3D培养]]` (the first MOC, created 2026-08-10) — confirming the MOC pattern is in active use on real deep-reads.
- **CelVivo industrial customers program** — a dedicated subfolder under - **CelVivo industrial customers program** — a dedicated subfolder under
@@ -731,7 +750,84 @@ fields still 待补).
## Synthesis policy for this source ## Synthesis policy for this source
- **This run (2026-08-19, git-repo-1 18:08Z):** **0 new vault commits** - **This run (2026-08-20, git-repo-1 18:09Z):** **0 new vault commits**
in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window — the
vault HEAD is **unchanged at `a4fa5a32`** for the **4th consecutive
fetch** (the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle
+ Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most
recent vault activity, **4 calendar days stale** at this fetch).
**0 new vault mtime changes** — the 2 untracked directories
(`celvivo_commercial/` + `templates/`) and the 23+ untracked files
from the 2026-08-17T18:09Z fetch carry forward unchanged. The
`Review/zhou2023_computer_vision_microfluidics.md` first-entry in the
new `Review/` subfolder is **9-day carry-forward** at this fetch
(uncommitted since 2026-08-11); the structural signal for `Review/`
continues to weaken per the Notable-entity entry (the subfolder has
been a single-entry watchlist since 2026-08-13, now **7 fetches
silent**). Wiki-side: **2 new automated wiki commits** landed in
the 24-hour window — `a44f284` chore: daily update 2026-08-20
(2026-08-20 02:23 +0800) + `bd30339` chore(sources): refresh
NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-20,
2026-08-20 02:30 +0800) — advancing wiki HEAD from `dcb53a2`
(2026-08-19T18:08Z fetch) to `bd30339`. Both commits are routine
auto-orchestration: (a) the `a44f284` daily update carried the
synthesis-layer edits from the prior HN-1 2026-08-20T18:00Z +
web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z
runs; (b) the `bd30339` sources-sync re-applied the count-data wipe
pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the **sixth**
consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16
`997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` +
2026-08-19 `dcb53a2`).
**No new external evidence** in this run (vault silent), **no
new theme row**, **no new commitment row**, **no new open-question
row**, **no new personal-logistics item** — the synthesis layer
is unchanged. Wiki edits this run: (a) `/sources/git-repo.md` (this
page) — refreshed frontmatter HEAD pointers (vault HEAD unchanged at
`a4fa5a32`, wiki HEAD `dcb53a2` → `bd30339`, tags + `2026-08-20`,
timestamp → `2026-08-20T18:09:15Z`), refreshed the Connector /
State section to the new `2026-08-20T18-09-15-122Z` raw manifest,
refreshed the obsidian-vault working-tree-status section to
2026-08-20 (0 new commits, 0 new mtime changes, untracked set
unchanged; `Review/` 8-day → 9-day + `templates/` + `celvivo_commercial/`
3-day → 4-day carry-forward), refreshed the openwiki-wiki
working-tree-status section to 2026-08-20 (2 new automated wiki
commits + the carry-forward 10 uncommitted synthesis-layer edits),
added 2 new entries at the top of the Recent-commits-for-wiki
table (`bd30339` sources-sync 2026-08-20 + `a44f284` daily update
2026-08-20), refreshed the Summary-of-last-48-hours table to add
the 2026-08-19T18:08Z → 2026-08-20T18:09Z window data (0 vault
commits / 2 wiki commits / operational row noting the **sixth**
consecutive sources-sync re-applying the count-data wipe pattern),
refreshed the Notable-entity `Review/` entry (8-day → 9-day carry-
forward, **6 fetches silent** → **7 fetches silent**) + bumped
`templates/` + `celvivo_commercial/` 3-day → 4-day, refreshed
the Synthesis-policy section with this run's delta summary;
(b) `/themes/05-robin-research.md` — vault-snapshot metadata
refreshed (fetch timestamp → `2026-08-20T18:09:15Z`, raw-manifest path
→ the new `2026-08-20T18-09-15-122Z` manifest); the vault HEAD
pointer stays `a4fa5a32` (unchanged across the 2026-08-17 +
2026-08-18 + 2026-08-19 + 2026-08-20 fetches); `Review/`
8-day → 9-day carry-forward; `Templates/` + `CelVivo-commercial/`
3-day → 4-day; (c) `/quickstart.md` — added the "Latest update
— git-repo-1 (2026-08-20T18:09Z)" paragraph; updated the Backlog
git-repo entry to reflect the new wiki HEAD `bd30339` + 2 new
automated wiki commits + the carry-forward 10 uncommitted files +
the **sixth** consecutive sources-sync note; (d) `/sources/README.md`
— refreshed Active connectors Git repo row + Connector roll Git
repo row to mention the 2026-08-20 18:09 UTC fetch + the **sixth**
consecutive sources-sync. **No `/themes.md` row change, no
`/commitments.md` row, no `/open-questions.md` row, no
`/personal-logistics.md` item** — the vault delta is empty and the
wiki delta is automated maintenance only. The "vault is silent on
a 24-hour window" pattern continues to be normal cadence for Robin's
workflow (the 2026-08-13 + 2026-08-15 + 2026-08-18 + 2026-08-19
fetches were also 0-new-vault-commits daily-cycle follow-ups; the
2026-08-20 fetch makes it **5 consecutive 0-new-vault-commit
fetches**). The synthesis layer (themes / commitments /
open-questions / personal-logistics) is independent of the wiki-side
automated maintenance commits.
- **Previous run (2026-08-19, git-repo-1 18:08Z):** **0 new vault commits**
in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window — the in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window — the
vault HEAD is **unchanged at `a4fa5a32`** for the **3rd consecutive vault HEAD is **unchanged at `a4fa5a32`** for the **3rd consecutive
fetch** (the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle fetch** (the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle
@@ -796,7 +892,7 @@ fields still 待补).
a 24-hour window" pattern continues to be normal cadence for Robin's a 24-hour window" pattern continues to be normal cadence for Robin's
workflow (the 2026-08-13 + 2026-08-15 + 2026-08-18 fetches were workflow (the 2026-08-13 + 2026-08-15 + 2026-08-18 fetches were
also 0-new-vault-commits daily-cycle follow-ups; the 2026-08-19 also 0-new-vault-commits daily-cycle follow-ups; the 2026-08-19
fetch makes it **4 consecutive 0-new-vault-commit fetches**). fetch made it **4 consecutive 0-new-vault-commit fetches**).
The synthesis layer (themes / commitments / open-questions / The synthesis layer (themes / commitments / open-questions /
personal-logistics) is independent of the wiki-side automated personal-logistics) is independent of the wiki-side automated
maintenance commits. maintenance commits.
sources/hackernews.md
+39 -4
View File
@@ -2,7 +2,8 @@
type: "Reference" type: "Reference"
title: "Hacker News — evidence index" title: "Hacker News — evidence index"
description: "Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items." description: "Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items."
tags: [hackernews, evidence-index, source, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-16, 2026-08-15, 2026-08-13, 2026-08-12, 2026-08-10] tags: [hackernews, evidence-index, source, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-16, 2026-08-15, 2026-08-13, 2026-08-12, 2026-08-10]
timestamp: 2026-08-20T18:00:02Z
--- ---
# Hacker News — evidence index # Hacker News — evidence index
@@ -15,10 +16,44 @@ Compact evidence trail for the Hacker News connector (`hackernews-1`, Robin-cura
- **Backend:** public HN feeds (`top`, `new`) + Algolia HN search queries - **Backend:** public HN feeds (`top`, `new`) + Algolia HN search queries
- **Auth:** none — public feeds - **Auth:** none — public feeds
- **Window:** last 24 hours - **Window:** last 24 hours
- **Latest fetch:** `2026-08-19T18:00:32Z` (LLM-agent topic set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` — 6 queries; the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories" is the active query set; prior 2026-08-18 18:00, 2026-08-17 18:00, 2026-08-16 18:00, 2026-08-15 18:00, 2026-08-13 18:00, 2026-08-12 18:00, 2026-08-10 18:00, 2026-08-08 18:00, 2026-08-08 03:15, 2026-08-07 12:29, 2026-08-03 18:00, 2026-08-02 18:00, 2026-08-01 18:00, 2026-07-31 18:00, 2026-07-30 18:00, 2026-07-29 18:00, 2026-07-28 18:00, 2026-07-27 18:00, 2026-07-26 18:16 and 18:00 pulls also documented below) - **Latest fetch:** `2026-08-20T18:00:02Z` (LLM-agent topic set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` — 6 queries; the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories" is the active query set; prior 2026-08-19 18:00, 2026-08-18 18:00, 2026-08-17 18:00, 2026-08-16 18:00, 2026-08-15 18:00, 2026-08-13 18:00, 2026-08-12 18:00, 2026-08-10 18:00, 2026-08-08 18:00, 2026-08-08 03:15, 2026-08-07 12:29, 2026-08-03 18:00, 2026-08-02 18:00, 2026-08-01 18:00, 2026-07-31 18:00, 2026-07-30 18:00, 2026-07-29 18:00, 2026-07-28 18:00, 2026-07-27 18:00, 2026-07-26 18:16 and 18:00 pulls also documented below)
- **Raw dumps:** `~/.openwiki/connectors/hackernews/raw/2026-08-19T18-00-02-576Z/hackernews-results.json` (current — **eighth pull since 2026-08-07 with a fully-zero Algolia lane on all 6 vendor / workflow queries** (organoid/CelVivo/3Brain/Cellink/openwiki/deepagents each returned nbHits=0); the strongest items in scope for traceability are `49364559` OpenRouter Is Joining Stripe (6 pts, OpenRouter's own blog post confirming the 2026-08-17 rumor) + `49363710` Launch HN: OneCLI (YC S26) — OSS sandboxed agent harness for teams (21 pts, cites Hermes/OpenClaw/NanoClaw in submitter text), see 2026-08-19 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-18T18-00-02-266Z/hackernews-results.json` (prior — seventh pull since 2026-08-07 with a fully-zero Algolia lane on all 6 vendor / workflow queries; the closest direct adjacency is `49348136` Launch HN: machine0 (YC S26) — Persistent CPU and GPU VMs from the CLI which explicitly cites "OpenClaw & Hermes run 24/7" in submitter text, see 2026-08-18 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-17T18-00-01-808Z/hackernews-results.json` (prior — sixth pull since 2026-08-07 to have either a fully-zero or fully-noise Algolia lane (organoid/3Brain/Cellink each returned nbHits=6 string-collision noise; CelVivo/openwiki/deepagents each returned nbHits=0); two adjacents worth flagging for traceability: `49323381` Stripe acquires OpenRouter for $7B+ + `49331423` AI-Generated Copilot "Autofix" Snowflake Jira security incident, see 2026-08-17 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-16T18-00-02-618Z/hackernews-results.json` (prior — fifth consecutive fully-zero Algolia lane pull since 2026-08-07; two adjacents worth flagging for traceability: `49316271` Anthropic multi-agent systems research + `49319814` Show HN shared-memory public AI, see 2026-08-16 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-15T18-00-02-001Z/hackernews-results.json` (prior — fourth consecutive fully-zero Algolia lane pull since 2026-08-07; one high-engagement Robin-stack-adjacent: `49309549` Auto-research with codex 232x Faster Kernel, see 2026-08-15 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-13T18-00-02-662Z/hackernews-results.json` (prior — one directly-relevant `agent-memory-architecture` evidence (MCP Memory using OKF), see 2026-08-13 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-12T18-00-01-956Z/hackernews-results.json` (prior — one new low-engagement organoid signal, see 2026-08-12 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-10T18-00-02-327Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-10 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T18-00-01-989Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T03-14-40-856Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 03:15 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-07T12-29-44-173Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-07 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-03T18-00-02-766Z/hackernews-results.json` (earlier — material findings, see 2026-08-03 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-02T18-00-02-278Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-08-01T18-00-02-274Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-31T18-00-02-519Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-30T18-00-02-784Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-29T18-00-02-667Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-28T18-00-02-178Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-27T18-00-02-615Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-16-06-805Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-00-02-441Z/hackernews-results.json` - **Raw dumps:** `~/.openwiki/connectors/hackernews/raw/2026-08-20T18-00-02-455Z/hackernews-results.json` (current — **ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries**; `organoid` (7 hits: 1 thematic + 6 string-collision noise on the "organi-" substring) + `3Brain` (10 hits: 1 thematic + 9 string-collision noise on "brain" / author-substring) + `Cellink` (4 hits: all string-collision noise on "calling"/"celine"/"ceiling"/"welling" substrings) + `CelVivo`/`openwiki`/`deepagents` (each 0); the strongest in-scope item is `49366519` "Human brain organoids record the passage of time over multiple years" (18 pts top, by `sbulaev`, https://www.nature.com/articles/s41586-026-10877-x — **first new organoid + neuroscience-in-vitro signal since the 2026-08-12 Wired `49266068` "AI Is Dead. Organoids Are Alive" entry**, surfaces the `class-organoid-3d-bioprinting` theme row Last-seen refresh), with two named-stack-adjacent traceability items worth flagging: `49367350` "Feature Request: Support AGENTS.md" (340 pts best, by `fg137`, github.com/anthropics/claude-code/issues/6235 — Claude Code issue requesting native `AGENTS.md` standard support, the same AGENTS.md standard referenced in OpenWiki's ROOT_SYSTEM_POLICY) + `49365443` "Unsloth Dynamic 3.0 GGUFs" (314 pts best, by `jonesy827`, unsloth.ai — Unsloth's quantized-format release upstream of `unsloth/MiniMax-M3-GGUF` cited on `MiniMax-m3` row), see 2026-08-20 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-19T18-00-02-576Z/hackernews-results.json` (prior — **eighth pull since 2026-08-07 with a fully-zero Algolia lane on all 6 vendor / workflow queries** (organoid/CelVivo/3Brain/Cellink/openwiki/deepagents each returned nbHits=0); the strongest items in scope for traceability are `49364559` OpenRouter Is Joining Stripe (6 pts, OpenRouter's own blog post confirming the 2026-08-17 rumor) + `49363710` Launch HN: OneCLI (YC S26) — OSS sandboxed agent harness for teams (21 pts, cites Hermes/OpenClaw/NanoClaw in submitter text), see 2026-08-19 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-18T18-00-02-266Z/hackernews-results.json` (prior — seventh pull since 2026-08-07 with a fully-zero Algolia lane on all 6 vendor / workflow queries; the closest direct adjacency is `49348136` Launch HN: machine0 (YC S26) — Persistent CPU and GPU VMs from the CLI which explicitly cites "OpenClaw & Hermes run 24/7" in submitter text, see 2026-08-18 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-17T18-00-01-808Z/hackernews-results.json` (prior — sixth pull since 2026-08-07 to have either a fully-zero or fully-noise Algolia lane (organoid/3Brain/Cellink each returned nbHits=6 string-collision noise; CelVivo/openwiki/deepagents each returned nbHits=0); two adjacents worth flagging for traceability: `49323381` Stripe acquires OpenRouter for $7B+ + `49331423` AI-Generated Copilot "Autofix" Snowflake Jira security incident, see 2026-08-17 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-16T18-00-02-618Z/hackernews-results.json` (prior — fifth consecutive fully-zero Algolia lane pull since 2026-08-07; two adjacents worth flagging for traceability: `49316271` Anthropic multi-agent systems research + `49319814` Show HN shared-memory public AI, see 2026-08-16 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-15T18-00-02-001Z/hackernews-results.json` (prior — fourth consecutive fully-zero Algolia lane pull since 2026-08-07; one high-engagement Robin-stack-adjacent: `49309549` Auto-research with codex 232x Faster Kernel, see 2026-08-15 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-13T18-00-02-662Z/hackernews-results.json` (prior — one directly-relevant `agent-memory-architecture` evidence (MCP Memory using OKF), see 2026-08-13 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-12T18-00-01-956Z/hackernews-results.json` (prior — one new low-engagement organoid signal, see 2026-08-12 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-10T18-00-02-327Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-10 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T18-00-01-989Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T03-14-40-856Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 03:15 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-07T12-29-44-173Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-07 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-03T18-00-02-766Z/hackernews-results.json` (earlier — material findings, see 2026-08-03 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-02T18-00-02-278Z/hackernews-results.json` (emptLine truncated
## Latest update — 2026-08-19 18:00 UTC ## Latest update — 2026-08-20 18:00 UTC
- **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed had 30 IDs (23 resolved items), `best` feed had 30 IDs (8 resolved items); deduplication gave **28 unique items across both feeds** (3 overlap: `49372583` AliExpress runs silent WebAudio fingerprinting that breaks Bluetooth multipoint, `49373456` Show HN: I trained a 125M model to autocomplete piano on-device, `49371006` Windows brings out the Rorschach test in everyone (2003)). The 6-query lane returned the hit table below — unlike the prior 8 pulls that surfaced zero vendor-anchored hits, this pull surfaces **two thematic hits (`49366519` neural-organoid + `49373812` miniature-brains) on the `organoid` and `3Brain` Algolia queries respectively** alongside string-collision noise; the connector completed normally at `fetchedAt: 2026-08-20T18:00:02.455Z` (24-hour window).
- **Life-science lane:** **zero vendor-anchored hits across the four named vendor queries (CelVivo, 3Brain+Cellink+organoid themed hits are application-domain, not vendor-direct).** `CelVivo` returned `nbHits=0` (clean zero). `organoid` returned `nbHits=7` — 1 thematic + 6 string-collision noise: the thematic hit is `49366519` "Human brain organoids record the passage of time over multiple years" (Nature 2026, https://www.nature.com/articles/s41586-026-10877-x, by `sbulaev` 2026-08-19 20:07, 18 pts top-feed) — a Nature paper on neural-organoid long-term time perception that **directly speaks to Robin's organoid + neuroscience-in-vitro application domain and to the `class-organoid-3d-bioprinting` theme row** (which already cites the 2026-08-12 Wired `49266068` "AI Is Dead. Organoids Are Alive" + the 2026-07-27 Nature biocomputing article `49071596` + the 2026-07-28 owlposting drug-discovery essay `49083799` + the Liu 2026 / Miao 2025 / Sharma 2026 flywheel-sync literature deep-reads of 2026-08-08 as application-domain anchors). The 6 string-collision noise hits are all on the "organi-" substring (e.g. `49374830` "Show HN: Omacosy" body-text "MacOS Sonoma", `49375719` "Anti-AI fonts" body-text "organization", `49376038` "Launch HN: Vendo" body-text "organization" — none of these relate to bioprinters). `3Brain` returned `nbHits=10` — 1 thematic + 9 string-collision noise: the thematic hit is `49373812` "Scientists Have Built Miniature Brains That Experience the Passage of Time" (Science Alert article, https://www.sciencealert.com/unprecedented-scientists-have-built-miniature-brains-that-experience-the-passage-of-time, by `geox` 2026-08-20 12:39, 2 pts top-feed) — the **same Nature paper** as `49366519` (different Algolia lane and different angle: Science Alert user-press write-up of the Nature s41586-026-10877-x organoid-time-passage research). The 9 string-collision noise hits are all on the "brain" / "Brain*" author-substring (e.g. `49366792` "DFlash 2: Keep Drafting Parallel" by `mike-the-brain` 92 pts top, `49375055` "I built AI tool to find the right VCs" by `Brainologist`, `49371671` "How psychedelics reorganise the patterns in your brain", `49370817` "Psychedelics align brain activity with context" 4 pts Nature, `49369723` "Bill Ackman: Why We're Donating $400M to Brain Research", `49371900` "Show HN: An attempt to do a healthy screentime app for toddlers", `49377276` "Therapy for the Vibe-Coded Brain [video]" 2 pts, `49376185` "Show HN: okfctl" 3 pts unrelated context — none of these relate to 3Brain HD-MEA). `Cellink` returned `nbHits=4` — all string-collision noise (no thematic Cellink hits): `49373427` U.S. preparing to force Netherlands to ban ASML from selling to China (body-text "cell"/"scale"), `49371557` U.S. preparing to foce Netherlands to ban ASML from selling to China (body-text "cell"/"scale"), `49368886` "CIA funding helped keep NeXT afloat in the 80s" 175 pts top (body-text "ceiling"/"calling"), `49365646` "UC Berkeley professor admits to using AI in op-ed" 4 pts (body-text "well-being"). This is the **ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 + 2026-08-19 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls where vendor queries returned substring-fragment noise rather than fully zero; the 2026-08-20 pull reverts to the noise-only pattern on the 4 vendor queries, **but with two application-domain thematic hits** — `49366519` organoid + `49373812` miniature-brains — which is **the first pull in the 9-pull streak to surface a thematic on the `organoid`/`3Brain` lanes since the 2026-08-12 `49266068` Wired feature**). The Tavily (web-search) lane remains the productive lane for vendor news; the HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents (Stripe-OpenRouter confirmation + machine0 + OneCLI + OpenRouter-Stripe rumor + Copilot Autofix + Unsloth Dynamic 3.0 GGUFs + AGENTS.md) + low-engagement application-domain watchlist items (organoid / neuroscience / Wired features)" rather than vendor-direct signals.
- **Workflow lane:** **zero positive `openwiki` brand hits; zero `deepagents` hits.** `openwiki` and `deepagents` both returned `nbHits=0` — so the `openwiki-brand` watchlist row on `/themes.md` stays at Last seen 2026-07-16. The 28 unique top+best items include **no directly-relevant item for any `/themes.md` row by vendor**, but include **one thematic application-domain item for the `class-organoid-3d-bioprinting` row** (`49366519` Nature organoid-time-passage paper, 18 pts) + **two named-stack-adjacent items worth flagging for traceability** that touch Robin's broader AI-agent lane + **two application-domain flagship items adjacent to existing themes** — plus several higher-engagement items that fall outside Robin's 4 application domains (3D cell culture, 3D bioprinting, neuroscience in vitro, organoid workflows) and the named-stack scope (Hermes / MiniMax / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI). The two thematic + two named-stack-adjacent items below stay adjacent-not-promoted under the brief's "low-engagement items are watchlist by default; promotion requires recurrence, strong engagement, or corroboration" rule **and** the `/themes.md` scope discipline, with one exception: the `49366519` organoid signal qualifies for a `class-organoid-3d-bioprinting` theme-row Last-seen refresh by the **recurrence criterion** (the `class-organoid-3d-bioprinting` row already cites organoid + neuroscience-in-vitro intersection items, and the new organoid-time-passage Nature paper directly fits the existing row's evidence footprint — same domain, same recurrence pattern as the 2026-08-12 Wired `49266068`).
- **`49366519` "Human brain organoids record the passage of time over multiple years"** (18 pts, 1 cmt, **top feed**, by `sbulaev` 2026-08-19 20:07, https://www.nature.com/articles/s41586-026-10877-x — Nature 2026 paper). **First new organoid + neuroscience-in-vitro thematic signal since the 2026-08-12 Wired `49266068` "AI Is Dead. Organoids Are Alive" entry** — and only the **second neural-organoid HN signal** since the 2026-07-27 Nature biocomputing article `49071596` (computational-substrate-for-intelligence theme). The Nature paper records that human brain organoids maintained in long-term culture develop signatures of multi-year temporal processing — directly relevant to CelVivo's "long-term stable organoid culture" ClinoReactor value proposition (ClinoReactor's competitive advantage is enabling weeks-to-months of stable organoid culture without shaker / matrix; a multi-year neural-organoid time-perception thesis is the canonical example of why long-term stable culture matters) and to the broader `class-organoid-3d-bioprinting` theme row's "neuroscience in vitro" application-domain branch. The 18-pt top-feed engagement is **moderate** (above the 5-pt `49266068` 2026-08-12 Wired organoid trigger but below the 100+ pt high-engagement vendor-release bar) but the **recurrence + topic-match criterion** qualifies it for a theme-row Last-seen refresh per the brief's "Promote to /themes.md only when the item recurs, matches existing topics, has strong engagement, or corroborates another source" rule. **Promoted to /themes.md `class-organoid-3d-bioprinting` row Last seen** — first organoid signal since 2026-08-12 → Last seen moves 2026-08-12 → **2026-08-20**. **Adjacent-not-promoted to a new theme row** because (a) the neural-organoid + long-term-culture thesis is already covered by the existing row's `class-organoid-3d-bioprinting` evidence footprint (the Wired 2026-08-12 organoid-computing essay + the Liu 2026 Nat Biomed Eng shape-conformal neural-organoid e-phys deep-read of 2026-08-08 + the Sharma 2026 Cell Stem Cell vascularized retinal organoid RGC deep-read of 2026-08-08); (b) 18-pt engagement does not warrant a new row by itself; (c) CelVivo has no current HN footprint and the paper does not announce a CelVivo commercial milestone (the Tavily web-search lane remains the productive vendor-direct lane). **No commitment row** — the paper is upstream academic evidence; the actual CelVivo ClinoReactor sales motion does not change because of a Nature paper. **No open-question row** — the open questions about CelVivo × 3Brain long-term culture (per `/open-questions.md` `liu-2026-rogers-lab-vs-3brain-relationship` and `sharma-2026-retinal-organoid-mea-cross-sell`) already cover the long-term-stability / cross-sell synthesis path that this Nature paper further corroborates; no new gap is exposed.
- **`49367350` "Feature Request: Support AGENTS.md"** (340 pts, 212 cmts, **best feed**, by `fg137`, https://github.com/anthropics/claude-code/issues/6235). GitHub feature-request issue on the Anthropic Claude Code repo asking Anthropic to **natively support the `AGENTS.md` standard** — i.e. the same single-file-per-repo convention referenced in OpenWiki's ROOT_SYSTEM_POLICY at "Repository /AGENTS.md and /CLAUDE.md files are instructions for repository code agents, not local-wiki instructions." This is the **highest-engagement workflow-lane-adjacent item of the pull** (340 pts + 212 cmts — also the highest-engagement Anthropic-side item surfaced on HN best in this 9-pull streak, and the second-highest "AI-agent stack" engagement after the 2026-08-17 Copilot Autofix Snowflake Jira 168-pt top signal). Strong topical fit to Robin's named-stack lane (Claude Code itself is **not on** Robin's named daily-driver stack — Hermes Agent / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI are the named agents — but the `AGENTS.md` standard is referenced by the OpenWiki ROOT_SYSTEM_POLICY and is increasingly becoming the cross-vendor convention for repository-level agent instructions). **Adjacent-not-promoted** per scope because (a) Claude Code is **not on Robin's named daily-driver stack**; (b) the established scope rule keeps non-named-stack agent-infrastructure features adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself (per the 2026-07-30 / 2026-08-03 / 2026-08-10 / 2026-08-12 / 2026-08-13 / 2026-08-15 / 2026-08-16 / 2026-08-17 / 2026-08-18 / 2026-08-19 traceability entries); (c) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote a third-party vendor feature request to a `/themes.md` row by itself, though the **340-pt engagement + the explicit `AGENTS.md` cross-walk to OpenWiki's own ROOT_SYSTEM_POLICY** make this the strongest workflow-standard-adjacent signal of the pull. Flagged for traceability because (a) the issue directly names the **`AGENTS.md` standard** that OpenWiki's tooling assumes — **first HN signal since the 2026-07-16 `langchain-ai/openwiki` brand signal to surface the `AGENTS.md` standard explicitly**; (b) if Anthropic adopts native `AGENTS.md` support in a future Claude Code release, that becomes the vendor-level adoption event for the standard that OpenWiki's ROOT_SYSTEM_POLICY already references — same vendor-adoption pattern as the `agent-memory-architecture` row's Last-seen refresh on the 2026-08-13 `49286073` MCP Memory using Google's OKF entry (the criterion that drove the 2026-08-13 OKF+memory schema row refresh); (c) any future HN item at higher engagement combining Claude Code `AGENTS.md` adoption + Hermes Agent / Codex CLI / OpenWiki `AGENTS.md` alignment becomes the first corroborating event for an `agent-memory-architecture` row description extension on repository-level-agent-instruction standards. **No commitment row** — Robin's stack already follows the `AGENTS.md` convention via the OpenWiki ROOT_SYSTEM_POLICY; if Anthropic's adoption changes anything, it surfaces as a future signal.
- **`49365443` "Unsloth Dynamic 3.0 GGUFs"** (314 pts, 115 cmts, **best feed**, by `jonesy827`, https://unsloth.ai/docs/basics/dynamic-3.0-ggufs). Unsloth's release of **Dynamic 3.0 GGUFs** — a quantization-format change to Unsloth's local-LLM serving recipe. **Strong named-stack-adjacent signal** because Unsloth is the same vendor that publishes `unsloth/MiniMax-M3-GGUF` (the HuggingFace MiniMax-M3 GGUF model cited on the `/themes.md` `MiniMax-m3` row as "HuggingFace 2026-08-01 confirming quantized local-LLM run path"); Dynamic 3.0 GGUFs is **upstream of any quantized MiniMax-M3 path** — if Robin runs unsloth/MiniMax-M3-GGUF locally (per `unsloth.ai/docs/basics/dynamic-3.0-ggufs`), the Dynamic 3.0 release affects the local quantized runtime. **Adjacent-not-promoted** per scope because (a) 314-pt engagement is high but the release is on Unsloth's quantization-format recipe, **not a MiniMax model release** (per scope discipline "the established scope rule keeps inference-tooling releases adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself"); (b) the existing `MiniMax-m3` row already cites `unsloth/MiniMax-M3-GGUF` + the Tavily 2026-08-03 pull for the quantized local-LLM run path; the Dynamic 3.0 release is a release-cadence signal, not a MiniMax model change; (c) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote an Unsloth release to a `/themes.md` row by itself. Flagged for traceability because (a) the 314-pt engagement is **the third-highest engagement on this pull** (after `49367350` AGENTS.md 340 pts and `49365405` Go 1.27 732 pts off-scope) — strong enough to surface in any HN digest; (b) any future HN item combining Unsloth Dynamic 3.0 + explicit MiniMax-M3-GGUF compatibility notes becomes the first corroborating event for a `MiniMax-m3-row-annex-local-llm-runtime-changes` annex on the existing row; (c) if Robin personally runs into a local-LLM incompatibility on the ITX 24h host (per `itx-24h-host-build-2026-q3` on `/commitments.md`) because of a Dynamic 3.0 GGUFs upgrade, that becomes a downstream commitment entry. **No commitment row** — Dynamic 3.0 is a toolchain release, not a vendor-stack change Robin acts on today.
- **`49373812` "Scientists Have Built Miniature Brains That Experience the Passage of Time"** (2 pts, 0 cmts, **top feed**, by `geox` 2026-08-20 12:39, https://www.sciencealert.com/unprecedented-scientists-have-built-miniature-brains-that-experience-the-passage-of-time). The Science Alert user-press write-up of the **same Nature paper** as `49366519` — different Algolia lane (3Brain query, surface `49373812` vs `49366519` on the organoid query), different framing ("Miniature Brains" rather than the Nature title), 2-pt engagement vs 18 pts. **Cross-walked under the same organoid-time-passage thematic** as the primary `49366519` entry above; not promoted to a separate evidence cell because the underlying paper + the user-press write-up form a two-entry cluster for the same finding.
- **Highest-engagement items off-scope:** the remaining 23 of 28 unique top+best items fall outside Robin's named stack + 4 application domains per the brief's scope filter — `49371857` "Don't paste the AI, please" (947 pts best, 506 cmts — **highest-engagement item of the pull**, by `pjerem`, https://dontpastetheai.com/ — anti-AI-essay on reading comprehension, off-scope); `49365405` "Go 1.27" (732 pts best, 246 cmts — Go language release, off-scope); `49372583` AliExpress WebAudio fingerprinting (664 pts top, 220 cmts — consumer privacy / Bluetooth, off-scope); `49373456` Show HN 125M piano autocomplete (355 pts top, 85 cmts — on-device ML audio, off-scope); `49371006` "Windows brings out the Rorschach test in everyone (2003)" (321 pts top, 114 cmts — Microsoft retro essay, off-scope); `49369408` "Turns are Better than Radians (2022)" (321 pts top, 182 cmts — math essay, off-scope); `49368886` "CIA funding helped keep NeXT afloat in the 80s" (175 pts top, 95 cmts — WSJ, off-scope); `49374269` "Malicious Rust crate Arrayref runs a build-time payload" (264 pts top, 208 cmts — supply-chain security, off-scope); `49374287` "DiffusionGemma Technical Report" (98 pts top, 18 cmts — Google diffusion model report, off-scope); `49375996` "Clean up Claude 5's token vomit with a separate LLM" (92 pts top, 89 cmts — Claude tooling, off-scope); `49373932` "Xorg-Server 26.0.99.901" (77 pts top, 28 cmts — X11 release, off-scope); `49374873` "An elliptic curve of rank ≥ 30" (56 pts top, 15 cmts — number theory, off-scope); `49374772` "Hacking with Claude on a $27 Smart Watch" (55 pts top, 29 cmts — embedded Claude experiment, off-scope); `49375719` "Anti-AI fonts are useless and harmful" (49 pts top, 33 cmts — typography essay, off-scope); `49376265` "Linux 7.2 Released" (47 pts top, 7 cmts — Linux kernel release, off-scope); `49376332` "How to compromise your system with a job interview" (47 pts top, 19 cmts — security essay, off-scope); `49374635` "Every Model Cheats" (44 pts top, 28 cmts — cyber-AI research, off-scope); `49375237` "Show HN: Check if any of the $656M in unclaimed royalties at The MLC is yours" (40 pts top, 22 cmts — music royalties, off-scope); `49375244` "Show HN: Open-source Stripe Connect alternative" (35 pts top, 18 cmts — payment infra adjacent to the 2026-08-17 Stripe-OpenRouter deal traceability, off-scope per scope discipline); `49376211` "Generic Methods in Go 1.27" (33 pts top, 10 cmts — Go generics essay, off-scope); `49377660` "Show HN: We chased a weather balloon across Montana and never found it" (7 pts top, 3 cmts — wire-applied project, off-scope); `49377535` "URL shortener links stored in your ATProto PDS" (8 pts top, 0 cmts — protocol essay, off-scope); `49377249` "The Defense-Tech Bubble Is Headed for Consolidation" (8 pts top, 0 cmts — defense-tech essay, off-scope); `49377248` "Sixtyfour (YC P25) Is Hiring" (1 pt top, 0 cmts — YC hiring, off-scope); `49374830` "Show HN: Omacosy – Omarchy-style tiling desktop for macOS, no SIP" (6 pts top, 3 cmts — macOS desktop, off-scope but Algolia `organoid` substring noise hit on "MacOS Sonoma"); `49376038` "Launch HN: Vendo (YC S26) – Let users build features on top of your product" (21 pts top, 9 cmts — YC S26 launch for an OSS in-product UI-builder platform, off-scope but Algolia `organoid` substring noise hit on "organization" in body). Engagement range 0–947 pts across the 28 items; **1 item matches a Robin application-domain keyword for theme-row Last-seen refresh** (`49366519` organoid → `class-organoid-3d-bioprinting` Last seen 2026-08-20), **3 items match Robin's broader agent-stack lane** (`49367350` Claude Code AGENTS.md touches `agent-memory-architecture` + `hermes-agent-v0-19-quicksilver` adjacents, `49365443` Unsloth Dynamic 3.0 GGUFs touches `MiniMax-m3` adjacent, `49375996` "Clean up Claude 5's token vomit with separate LLM" 92 pts top touches the Claude / AI-coding-agent lane but stays adjacent-not-promoted per the established scope rule for non-named-stack agent-tooling releases). Per the brief: low-engagement items stay watchlist by default; only high-engagement + directly-relevant items earn promotion. The `49366519` organoid signal qualifies by the **recurrence criterion** + the existing `class-organoid-3d-bioprinting` topic-match footprint; `49367350` AGENTS.md + `49365443` Unsloth Dynamic 3.0 stay adjacent-not-promoted per scope discipline.
- **Synthesis result:** **one theme-row Last-seen refresh (`class-organoid-3d-bioprinting` Last seen 2026-08-12 → 2026-08-20); no new theme row, no commitment row, no open-question row, no personal-logistics item.** The `class-organoid-3d-bioprinting` row on `/themes.md` refreshes Last seen 2026-08-12 → 2026-08-20 with the new `49366519` Nature organoid-time-passage paper + the cross-walked `49373812` Science Alert write-up; `49470089` organoid+CelVivo-relevant correlation rises to the second organoid + neuroscience-in-vitro thematic item in 8 days, reinforcing the application-domain branch of the existing row. The `agent-memory-architecture` row stays at Last seen 2026-08-13 (no OKF / MCP Memory / Karpathy LLM Wiki / Agent Mesh item; `49367350` AGENTS.md is the first signal since the 2026-07-16 `langchain-ai/openwiki` brand entry to surface the `AGENTS.md` standard explicitly, but adjacent-not-promoted because Claude Code is not on Robin's named stack — if Anthropic adopts native `AGENTS.md` support in a future Claude Code release, that becomes the vendor-adoption event for the standard OpenWiki's ROOT_SYSTEM_POLICY already references and refreshes the row's last-seen date). The `MiniMax-m3` row stays at Last seen 2026-08-03 (no MiniMax model release; `49365443` Unsloth Dynamic 3.0 GGUFs is an Unsloth quantization-format release upstream of `unsloth/MiniMax-M3-GGUF` — adjacent-not-promoted per scope discipline). The `hermes-agent-v0-19-quicksilver` row stays at Last seen 2026-08-03 (no Hermes Agent release; `49367350` AGENTS.md feature request is a Claude Code issue, not a Hermes Agent release). The `openwiki-brand` watchlist row stays at Last seen 2026-07-16 (no positive `openwiki` hits — clean zero across both feed sweep and Algolia lane). **Key calls**:
- **`49366519` "Human brain organoids record the passage of time over multiple years"** is the **first new organoid + neuroscience-in-vitro thematic signal since the 2026-08-12 `49266068` Wired "AI Is Dead. Organoids Are Alive" entry** — by the **recurrence criterion** (organoid + neuroscience-in-vitro intersection items appearing in HN for the second time in 8 days) + the topic-match criterion (the new Nature paper directly fits the existing `class-organoid-3d-bioprinting` row's evidence footprint, which already cites organoid + neuroscience-in-vitro intersection items like the 2026-07-27 Nature biocomputing article `49071596` + the 2026-07-28 owlposting drug-discovery essay `49083799` + the 2026-08-08 Liu 2026 / Miao 2025 / Sharma 2026 flywheel-sync literature deep-reads), the theme-row Last-seen refreshes from 2026-08-12 to **2026-08-20**. 18-pt engagement is moderate (above the 5-pt `49266068` 2026-08-12 Wired organoid trigger but below the 100+ pt high-engagement vendor-release bar) so the refresh qualifies by the brief's recurrence rule **but does not warrant a new theme row**; the existing row is the canonical synthesis home for organoid + neuroscience-in-vitro signals. The Nature paper directly speaks to the CelVivo ClinoReactor long-term stable organoid culture value proposition (per the existing CelVivo value-prop thread on `/themes/01-organoid-equipment.md`); the Tavily web-search lane is the productive lane for CelVivo-direct commercial milestones, not HN.
- **`49367350` "Feature Request: Support AGENTS.md"** is the **highest-engagement workflow-lane-adjacent item of the pull** by virtue of the **explicit `AGENTS.md` cross-walk to OpenWiki's ROOT_SYSTEM_POLICY** — and **the first HN signal since the 2026-07-16 `langchain-ai/openwiki` brand entry to surface the `AGENTS.md` standard explicitly**. The 340-pt + 212-cmt engagement is the highest-engagement Anthropic-side HN item of the 9-pull streak and the second-highest "AI-agent stack" engagement after the 2026-08-17 Copilot Autofix Snowflake Jira 168-pt top signal. **Adjacent-not-promoted** per scope (Claude Code is not on Robin's named stack); the established scope rule keeps non-named-stack agent-infrastructure features adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself (per the 2026-07-30 / 2026-08-03 / 2026-08-10 / 2026-08-12 / 2026-08-13 / 2026-08-15 / 2026-08-16 / 2026-08-17 / 2026-08-18 / 2026-08-19 traceability entries). Flagged because (a) the **explicit `AGENTS.md` standard reference** cross-walks to the same standard that OpenWiki's ROOT_SYSTEM_POLICY assumes — a cross-vendor standard adoption question; (b) if Anthropic adopts native `AGENTS.md` support in a future Claude Code release, that becomes the vendor-level adoption event for the standard that OpenWiki's tooling already references — same vendor-adoption pattern as the `agent-memory-architecture` row's Last-seen refresh on the 2026-08-13 `49286073` MCP Memory using Google's OKF entry (the criterion that drove the 2026-08-13 OKF+memory schema row refresh); (c) any Hermes / Codex / OpenWiki-side response on a future pull (e.g. a Hermes Agent v0.21 release that explicitly cites AGENTS.md support, or a Codex CLI changelog row noting AGENTS.md compatibility, or OpenWiki CLI surfacing a generated AGENTS.md for downstream use) becomes the first corroborating event for an `agent-memory-architecture` row description extension on repository-level-agent-instruction standards. **No commitment row** — Robin's stack already follows the AGENTS.md convention via the OpenWiki ROOT_SYSTEM_POLICY; the Anthropic adoption does not change Robin's workflow today.
- **`49365443` "Unsloth Dynamic 3.0 GGUFs"** is the **strongest named-stack-adjacent item of the pull by quantization-runtime impact** by virtue of Unsloth being the same vendor that publishes `unsloth/MiniMax-M3-GGUF` (the `MiniMax-m3` row citation for the quantized local-LLM run path). The 314-pt + 115-cmt engagement is **the third-highest engagement on this pull** (after `49367350` AGENTS.md 340 pts and `49365405` Go 1.27 732 pts off-scope). **Adjacent-not-promoted** per scope (Unsloth quantization-format release, not a MiniMax model change); the established scope rule keeps inference-tooling releases adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself. Flagged because (a) the high engagement surfaces Unsloth's quantization-format evolution, which affects any local MiniMax-M3 path that uses `unsloth/MiniMax-M3-GGUF`; (b) any future HN item combining Unsloth Dynamic 3.0 + explicit MiniMax-M3-GGUF compatibility notes becomes the first corroborating event for a `MiniMax-m3-row-annex-local-llm-runtime-changes` annex on the existing row. **No commitment row** — Dynamic 3.0 is a toolchain release, not a vendor-stack change Robin acts on today; if Robin personally runs into a local-LLM incompatibility on the ITX 24h host (per `itx-24h-host-build-2026-q3` on `/commitments.md`), that becomes a downstream commitment entry.
- **`49373812` "Scientists Have Built Miniature Brains That Experience the Passage of Time"** is cross-walked under the same organoid-time-passage thematic as the primary `49366519` entry above; not promoted to a separate evidence cell because the underlying Nature paper + the Science Alert user-press write-up form a two-entry cluster for the same finding.
- **This is the ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 + 2026-08-19 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-20 pull reverts to the noise-only pattern on the 4 vendor queries, **but with two application-domain thematic hits (`49366519` organoid + `49373812` miniature-brains) — the first pull in the 9-pull streak to surface a thematic on the `organoid`/`3Brain` Algolia lanes since the 2026-08-12 `49266068` Wired feature**). The pattern confirms that the empty-pulls-on-vendor-queries cadence is normal under the 6-query LLM-agent topic set — not an outage, no config-side intervention needed. The Tavily (web-search) lane remains the productive lane for vendor news; the HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents (Stripe-OpenRouter confirmation + machine0 + OneCLI + OpenRouter-Stripe rumor + Copilot Autofix + Unsloth Dynamic 3.0 GGUFs + AGENTS.md) + low-engagement application-domain watchlist items (organoid / neuroscience / Wired features)" rather than vendor-direct signals. The 3-overlap dedup count between `top` and `best` (28 unique from 23+8) is **lower than prior pulls** (the 2026-08-19 pull had 6-overlap from 20+12, the 2026-08-18 pull had 4-overlap from 21+10, the 2026-08-17 pull had 9-overlap from 26+17, the 2026-08-16 pull had 6-overlap from 19+12) — driven by `top` resolving more items (23) while `best` resolved only 8 in the 24-hour window; the dedup cadence is now stable across pulls and the 3-overlap ratio is consistent with a busy top feed.
| Query lane | Queries run | Qualifying results |
| --- | --- | --- |
| Life sciences / vendors (clean zero) | `CelVivo` | 0 |
| Life sciences / vendors (thematic + noise) | `organoid` | 1 thematic (`49366519` organoid-time-passage) + 6 noise (`49374830`, `49375719`, `49376038`, `49366025`? — `49371703` OpenIndex, `49369133`, `49367591` — substring noise on "organi-") |
| Life sciences / vendors (thematic + noise) | `3Brain` | 1 thematic (`49373812` miniature-brains) + 9 noise (`49366792` `mike-the-brain`, `49375055` `Brainologist`, `49371671`, `49370817`, `49369723`, `49371900`, `49377276`, `49376185`, `49366519` duplicate) |
| Life sciences / vendors (noise only) | `Cellink` | 0 (4 noise hits: `49373427`, `49371557`, `49368886`, `49365646` — substring noise on "calling"/"celine"/"ceiling") |
| AI workflow | `openwiki`, `deepagents` | 0 (both queries returned `nbHits=0`) |
Raw dump: `~/.openwiki/connectors/hackernews/raw/2026-08-20T18-00-02-455Z/hackernews-results.json`.
### Flag-for-traceability: Nature brain-organoid time-passage paper (in-scope organoid theme refresh), Anthropic Claude Code AGENTS.md feature request (openwik-AGENTS.md standard cross-walk), Unsloth Dynamic 3.0 GGUFs (MiniMax-M3-GGUF upstream), Science Alert miniature-brains organoid paper (cross-walked under `49366519`) — adjacent + 1 promoted to `class-organoid-3d-bioprinting` Last seen
- **49366519** (18 pts top, 1 cmt) **Human brain organoids record the passage of time over multiple years** — Nature 2026 paper (`sbulaev` 2026-08-19 20:07, https://www.nature.com/articles/s41586-026-10877-x). **First new organoid + neuroscience-in-vitro thematic signal on HN since the 2026-08-12 `49266068` Wired "AI Is Dead. Organoids Are Alive" entry** — and only the **second neural-organoid HN signal in 9 pulls** (after the 2026-07-27 Nature biocomputing article `49071596` computational-substrate-for-intelligence theme). The Nature paper records that human brain organoids maintained in long-term culture develop signatures of multi-year temporal processing — directly relevant to CelVivo's "long-term stable organoid culture" ClinoReactor value proposition (per the existing CelVivo value-prop thread on `/themes/01-organoid-equipment.md`; ClinoReactor's competitive advantage is enabling weeks-to-months of stable organoid culture without shaker / matrix) and to the broader `class-organoid-3d-bioprinting` theme row's "neuroscience in vitro" application-domain branch. **Promoted to /themes.md `class-organoid-3d-bioprinting` Last seen 2026-08-12 → 2026-08-20** by the brief's recurrence + topic-match criterion (organoid + neuroscience-in-vitro intersection items appearing in HN for the second time in 8 days, matching the existing row's evidence footprint). The 18-pt engagement is moderate (above the 5-pt `49266068` 2026-08-12 trigger but below the 100+ pt high-engagement vendor-release bar) so the **refresh qualifies but does not warrant a new theme row** — the existing `class-organoid-3d-bioprinting` row is the canonical synthesis home for organoid + neuroscience-in-vitro signals. **Adjacent-not-promoted to a new theme row** because (a) the neural-organoid + long-term-culture thesis is already covered by the existing row's evidence footprint (the Wired 2026-08-12 organoid-computing essay + the Liu 2026 Nat Biomed Eng shape-conformal neural-organoid e-phys deep-read of 2026-08-08 + the Sharma 2026 Cell Stem Cell vascularized retinal organoid RGC deep-read of 2026-08-08); (b) 18-pt engagement does not warrant a new row by itself; (c) CelVivo has no current HN footprint and the paper does not announce a CelVivo commercial milestone — the Tavily web-search lane remains the productive vendor-direct lane. **No commitment row** — the paper is upstream academic evidence, not a CelVivo / 3Brain sales motion. **No open-question row** — the open questions about CelVivo × 3Brain long-term culture (per `/open-questions.md` `liu-2026-rogers-lab-vs-3brain-relationship` and `sharma-2026-retinal-organoid-mea-cross-sell`) already cover the long-term-stability / cross-sell synthesis path that this Nature paper further corroborates; no new gap is exposed.
- **49373812** (2 pts top, 0 cmts) **Scientists Have Built Miniature Brains That Experience the Passage of Time** — Science Alert user-press write-up (`geox` 2026-08-20 12:39, https://www.sciencealert.com/unprecedented-scientists-have-built-miniature-brains-that-experience-the-passage-of-time). **Cross-walked under the same organoid-time-passage thematic as the primary `49366519` entry** — same Nature paper, different framing (user-press "Miniature Brains" framing rather than the Nature s41586-026-10877-x title), 2-pt engagement vs 18 pts on the primary entry. Surfaced on the `3Brain` Algolia lane (substring "brain") and on the organoid application-domain branch; not promoted to a separate evidence cell because the underlying Nature paper + the Science Alert write-up form a **two-entry cluster for the same finding** — both feed the same `class-organoid-3d-bioprinting` Last-seen refresh in this update.
- **49367350** (340 pts best, 212 cmts) **Feature Request: Support AGENTS.md** — GitHub feature-request issue on the Anthropic Claude Code repo (`fg137`, https://github.com/anthropics/claude-code/issues/6235). **Highest-engagement workflow-lane-adjacent item of the pull** by virtue of the **explicit `AGENTS.md` cross-walk to OpenWiki's ROOT_SYSTEM_POLICY** at "Repository /AGENTS.md and /CLAUDE.md files are instructions for repository code agents, not local-wiki instructions." 340-pt + 212-cmt engagement is **the highest-engagement Anthropic-side HN item of the 9-pull streak** and the second-highest "AI-agent stack" engagement after the 2026-08-17 Copilot Autofix Snowflake Jira 168-pt top signal. **First HN signal since the 2026-07-16 `langchain-ai/openwiki` brand entry to surface the `AGENTS.md` standard explicitly**. **Adjacent-not-promoted** per scope because (a) Claude Code is **not on Robin's named daily-driver stack** (Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI are the named agents); (b) the established scope rule keeps non-named-stack agent-infrastructure features adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself (per the 2026-07-30 / 2026-08-03 / 2026-08-10 / 2026-08-12 / 2026-08-13 / 2026-08-15 / 2026-08-16 / 2026-08-17 / 2026-08-18 / 2026-08-19 traceability entries); (c) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote a third-party vendor feature request to a `/themes.md` row by itself, though the **340-pt engagement + the explicit `AGENTS.md` cross-walk to OpenWiki's own ROOT_SYSTEM_POLICY** make this the strongest workflow-standard-adjacent signal of the pull. Flagged for traceability because (a) the issue directly names the **`AGENTS.md` standard** that OpenWiki's tooling assumes — **first HN signal since the 2026-07-16 `langchain-ai/openwiki` brand signal to surface the `AGENTS.md` standard explicitly**; (b) if Anthropic adopts native `AGENTS.md` support in a future Claude Code release, that becomes the vendor-level adoption event for the standard that OpenWiki's ROOT_SYSTEM_POLICY already references — same vendor-adoption pattern as the `agent-memory-architecture` row's Last-seen refresh on the 2026-08-13 `49286073` MCP Memory using Google's OKF entry (the criterion that drove the 2026-08-13 OKF+memory schema row refresh); (c) any future HN item at higher engagement combining Claude Code `AGENTS.md` adoption + Hermes Agent / Codex CLI / OpenWiki `AGENTS.md` alignment becomes the first corroborating event for an `agent-memory-architecture` row description extension on repository-level-agent-instruction standards. **No commitment row** — Robin's stack already follows the `AGENTS.md` convention via the OpenWiki ROOT_SYSTEM_POLICY; the Anthropic adoption does not change Robin's workflow today.
- **49365443** (314 pts best, 115 cmts) **Unsloth Dynamic 3.0 GGUFs** — Unsloth's release of Dynamic 3.0 GGUFs (`jonesy827`, https://unsloth.ai/docs/basics/dynamic-3.0-ggufs). **Strongest named-stack-adjacent item of the pull by quantization-runtime impact** by virtue of Unsloth being the same vendor that publishes `unsloth/MiniMax-M3-GGUF` (the HuggingFace citation on `/themes.md` `MiniMax-m3` row for the "quantized local-LLM run path"); Dynamic 3.0 GGUFs is **upstream of any quantized MiniMax-M3 path**. The 314-pt + 115-cmt engagement is **the third-highest engagement on this pull** (after `49367350` AGENTS.md 340 pts and `49365405` Go 1.27 732 pts off-scope). **Adjacent-not-promoted** per scope because (a) the release is on Unsloth's quantization-format recipe, **not a MiniMax model release** (per scope discipline "the established scope rule keeps inference-tooling releases adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself"); (b) the existing `MiniMax-m3` row already cites `unsloth/MiniMax-M3-GGUF` + the Tavily 2026-08-03 pull for the quantized local-LLM run path; the Dynamic 3.0 release is a release-cadence signal, not a MiniMax model change; (c) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote an Unsloth release to a `/themes.md` row by itself. Flagged for traceability because (a) the 314-pt engagement is strong enough to surface in any HN digest; (b) any future HN item combining Unsloth Dynamic 3.0 + explicit MiniMax-M3-GGUF compatibility notes becomes the first corroborating event for a `MiniMax-m3-row-annex-local-llm-runtime-changes` annex on the existing row; (c) if Robin personally runs into a local-LLM incompatibility on the ITX 24h host (per `itx-24h-host-build-2026-q3` on `/commitments.md`) because of a Dynamic 3.0 GGUFs upgrade, that becomes a downstream commitment entry. **No commitment row** — Dynamic 3.0 is a toolchain release, not a vendor-stack change Robin acts on today.
## Update — 2026-08-19 18:00 UTC
- **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed had 30 IDs (20 resolved items), `best` feed had 30 IDs (12 resolved items); deduplication gave **26 unique items across both feeds** (6 overlap: `49353221` A 3D fruit fly on macOS desktop powered by the real FlyWire connectome, `49355105` Scientists stunned by children's lung recovery in ultra low emission zone, `49354949` Cerebras CS-4, `49360242` Devices with GrapheneOS support should be available in 2027, `49362934` Remote workers report the highest well-being, `49363433` Civic Hygiene). The 6-query lane produced the hit table below; the connector completed normally at `fetchedAt: 2026-08-19T18:00:32.870Z` (24-hour window). - **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed had 30 IDs (20 resolved items), `best` feed had 30 IDs (12 resolved items); deduplication gave **26 unique items across both feeds** (6 overlap: `49353221` A 3D fruit fly on macOS desktop powered by the real FlyWire connectome, `49355105` Scientists stunned by children's lung recovery in ultra low emission zone, `49354949` Cerebras CS-4, `49360242` Devices with GrapheneOS support should be available in 2027, `49362934` Remote workers report the highest well-being, `49363433` Civic Hygiene). The 6-query lane produced the hit table below; the connector completed normally at `fetchedAt: 2026-08-19T18:00:32.870Z` (24-hour window).
- **Life-science lane:** **zero vendor-anchored hits across all four named vendor queries.** All four Algolia vendor queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`) returned `nbHits=0` in the 24 h window. A title/URL regex sweep across the 26 unique top+best items also turned up zero organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink / ClinoStar / ClinoReactor / MEA / spheroid / organ-on-chip items. The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **eighth pull since 2026-08-07 with a fully-zero Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls where vendor queries returned substring-fragment noise rather than fully zero; the 2026-08-19 pull returns to fully-zero across all four vendor queries). The Tavily (web-search) lane remains the productive lane for vendor news; the HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents + low-engagement application-domain watchlist items" rather than vendor-direct signals. The three highest-engagement life-science-adjacent items on this pull all fall outside Robin's 4 application domains and stay off the `class-organoid-3d-bioprinting` watchlist per the established "domain-anchored only" scope rule: `49361395` Moderna first positive Phase 3 mRNA neoantigen therapy in melanoma (346 pts, 142 cmts — **the highest-engagement life-science item of the pull** by far; mRNA cancer vaccine trial success; clinical oncology rather than organoid / 3D-bioprinting / in-vitro neuroscience); `49353221` A 3D fruit fly on macOS desktop powered by the real FlyWire connectome (363 pts, 171 cmts — **strongest in-vitro-neuroscience adjacency of the pull** by topic but it's a desktop visualization using the *Drosophila* FlyWire connectome, not an organoid electrophysiology / 3D-cell-culture workflow; off-scope per brief); `49355105` Scientists stunned by children's lung recovery in ultra low emission zone (371 pts, 339 cmts — high-engagement but air-pollution public health, outside Robin's 4 application domains). - **Life-science lane:** **zero vendor-anchored hits across all four named vendor queries.** All four Algolia vendor queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`) returned `nbHits=0` in the 24 h window. A title/URL regex sweep across the 26 unique top+best items also turned up zero organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink / ClinoStar / ClinoReactor / MEA / spheroid / organ-on-chip items. The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **eighth pull since 2026-08-07 with a fully-zero Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls where vendor queries returned substring-fragment noise rather than fully zero; the 2026-08-19 pull returns to fully-zero across all four vendor queries). The Tavily (web-search) lane remains the productive lane for vendor news; the HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents + low-engagement application-domain watchlist items" rather than vendor-direct signals. The three highest-engagement life-science-adjacent items on this pull all fall outside Robin's 4 application domains and stay off the `class-organoid-3d-bioprinting` watchlist per the established "domain-anchored only" scope rule: `49361395` Moderna first positive Phase 3 mRNA neoantigen therapy in melanoma (346 pts, 142 cmts — **the highest-engagement life-science item of the pull** by far; mRNA cancer vaccine trial success; clinical oncology rather than organoid / 3D-bioprinting / in-vitro neuroscience); `49353221` A 3D fruit fly on macOS desktop powered by the real FlyWire connectome (363 pts, 171 cmts — **strongest in-vitro-neuroscience adjacency of the pull** by topic but it's a desktop visualization using the *Drosophila* FlyWire connectome, not an organoid electrophysiology / 3D-cell-culture workflow; off-scope per brief); `49355105` Scientists stunned by children's lung recovery in ultra low emission zone (371 pts, 339 cmts — high-engagement but air-pollution public health, outside Robin's 4 application domains).
sources/index.md
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- [Agents 代理商档案索引 — 跨 agent CRM 同步](agents.md) - Cross-agent index of the Obsidian vault 02-Clients/Agents/* profiles (which agents Robin is actively working with, mapped by vendor product line). Base identity only — sensitive fields (phone / WeChat / email / end-customer list / opportunity value) live only in the private vault. Updated 2026-08-07 with _known_associations.md product-line → agent → end-customer mapping. - [Agents 代理商档案索引 — 跨 agent CRM 同步](agents.md) - Cross-agent index of the Obsidian vault 02-Clients/Agents/* profiles (which agents Robin is actively working with, mapped by vendor product line). Base identity only — sensitive fields (phone / WeChat / email / end-customer list / opportunity value) live only in the private vault. Updated 2026-08-07 with _known_associations.md product-line → agent → end-customer mapping.
- [全国经销商地图 (2026-08-07 时点)](distributors-china-2026.md) - Compact index of Robin's 2026-08-07 China distributor baseline (259 dealers across 7 regions, replacing 261 in the 2026-07-24 baseline) plus the new product-association index _known_associations.md. Surfaces CelVivo ClinoStar → 济南成全 + FemtoBiomed CellShot → 9X Bio → TriArm Therapeutics chain. Routes pricing-sensitive fields to the private Obsidian vault per /sources/agents.md privacy rule. - [全国经销商地图 (2026-08-07 时点)](distributors-china-2026.md) - Compact index of Robin's 2026-08-07 China distributor baseline (259 dealers across 7 regions, replacing 261 in the 2026-07-24 baseline) plus the new product-association index _known_associations.md. Surfaces CelVivo ClinoStar → 济南成全 + FemtoBiomed CellShot → 9X Bio → TriArm Therapeutics chain. Routes pricing-sensitive fields to the private Obsidian vault per /sources/agents.md privacy rule.
- [飞书邮箱 (Robin customer mailbox)](feishu-mail.md) - Planned cross-agent mailbox sync target for Robin's Feishu (飞书) mailbox (imap.feishu.cn:993 / imap.larksuite.com:993) — would let MiniMax code / Hermes recall 'what did Robin last discuss with customer X' from email metadata + summaries. Not yet provisioned — IMAP credentials + update script + crontab still pending Robin setup; this page documents the planned configuration and the sync policy that will be applied once provisioned. - [飞书邮箱 (Robin customer mailbox)](feishu-mail.md) - Planned cross-agent mailbox sync target for Robin's Feishu (飞书) mailbox (imap.feishu.cn:993 / imap.larksuite.com:993) — would let MiniMax code / Hermes recall 'what did Robin last discuss with customer X' from email metadata + summaries. Not yet provisioned — IMAP credentials + update script + crontab still pending Robin setup; this page documents the planned configuration and the sync policy that will be applied once provisioned.
- [Git repo — evidence index (Obsidian vault, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, **0 new vault commits in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window — vault is silent for the 3rd consecutive fetch**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD dcb53a2, 2026-08-19, **2 new automated wiki commits in the 2026-08-18T18:10Z → 2026-08-19T18:08Z window: `7e904ec` daily update 2026-08-19 + `dcb53a2` sources-sync 2026-08-19 — the fifth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here. - [Git repo — evidence index (Obsidian vault, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, **0 new vault commits in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window — vault is silent for the 4th consecutive fetch after the 2026-08-16 Quintard + Guo cluster**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD bd30339, 2026-08-20, **2 new automated wiki commits in the 2026-08-19T18:08Z → 2026-08-20T18:09Z window: `a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20 — the sixth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here.
- [Hacker News — evidence index](hackernews.md) - Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items. - [Hacker News — evidence index](hackernews.md) - Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items.
- [文献精读 Master Template (Robin 7-27 实战版, "真适合浏览" 1 文件)](ldr-report-template.md) - Master template for Robin's literature-deep-read (LDR) pipeline — consolidates 4 literature skills (`literature-deep-read` / `research` / `review` / `curation-for-sales`) into a single 8-rule + 3-trigger + 5-section "真适合浏览" report format. Synthesized from 4-27 SOP范本 + 7-27 实战 lessons (Tasevska / Raji / Bosnjakovic). Triggers "精读吧" / "发 wikijs" / "入库" / "A" / Id/DOI/PMID/PDF signals into 4-step精简 or 8-step完整 flows. PDF全文必传 + PyMuPDF xref去重 + 9项强制 + SeaFile hostname `fb.biokingdom.top` + NocoDB v1 JSON + 3张真图 + `journal-year-topic` 报告路径. - [文献精读 Master Template (Robin 7-27 实战版, "真适合浏览" 1 文件)](ldr-report-template.md) - Master template for Robin's literature-deep-read (LDR) pipeline — consolidates 4 literature skills (`literature-deep-read` / `research` / `review` / `curation-for-sales`) into a single 8-rule + 3-trigger + 5-section "真适合浏览" report format. Synthesized from 4-27 SOP范本 + 7-27 实战 lessons (Tasevska / Raji / Bosnjakovic). Triggers "精读吧" / "发 wikijs" / "入库" / "A" / Id/DOI/PMID/PDF signals into 4-step精简 or 8-step完整 flows. PDF全文必传 + PyMuPDF xref去重 + 9项强制 + SeaFile hostname `fb.biokingdom.top` + NocoDB v1 JSON + 3张真图 + `journal-year-topic` 报告路径.
- [Bosnjakovic 2025 PAH 3D 球体代谢组学: 跟 CelVivo ClinoStar dynamic culture 关系 (Bosnjakovic 2025 bioRxiv)](literature-cel-bosnjakovic-2025-pah-deepread.md) - Deep-read synthesis of Bosnjakovic A et al. 2025 bioRxiv preprint (DOI 10.1101/2025.07.10.663939v1, 2025-07-10) — 21-day mature HepG2 3D spheroids with graded non-cytotoxic BaP + BBF (PAH代表物) exposure for metabolomics biomarker discovery. Robin's connection: 3D spheroid protocol maps directly onto CelVivo ClinoStar dynamic culture; supports PAH exposure metabolomics positioning for hepatotoxicity / NAFLD modeling applications. 精读 2026-07-27. - [Bosnjakovic 2025 PAH 3D 球体代谢组学: 跟 CelVivo ClinoStar dynamic culture 关系 (Bosnjakovic 2025 bioRxiv)](literature-cel-bosnjakovic-2025-pah-deepread.md) - Deep-read synthesis of Bosnjakovic A et al. 2025 bioRxiv preprint (DOI 10.1101/2025.07.10.663939v1, 2025-07-10) — 21-day mature HepG2 3D spheroids with graded non-cytotoxic BaP + BBF (PAH代表物) exposure for metabolomics biomarker discovery. Robin's connection: 3D spheroid protocol maps directly onto CelVivo ClinoStar dynamic culture; supports PAH exposure metabolomics positioning for hepatotoxicity / NAFLD modeling applications. 精读 2026-07-27.
sources/nocodb.md
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---
type: "Reference"
title: "NocoDB 文献库索引 — 跨 agent 数据层"
openwiki_generated: true
---
# NocoDB 文献库索引 — 跨 agent 数据层 # NocoDB 文献库索引 — 跨 agent 数据层
> 数据源: NocoDB 13 个文献库 + 2 个公司库 (实时,每次 OpenWiki cron 跑时更新) > 数据源: NocoDB 13 个文献库 + 2 个公司库 (实时,每次 OpenWiki cron 跑时更新)
sources/ragflow.md
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---
type: "Reference"
title: "RAGFlow 全文检索索引 (Robin KB system)"
openwiki_generated: true
---
# RAGFlow 全文检索索引 (Robin KB system) # RAGFlow 全文检索索引 (Robin KB system)
> 数据源: RAGFlow (http://10.10.10.254:9980/) 14 个 KB 全文检索结果 > 数据源: RAGFlow (http://10.10.10.254:9980/) 14 个 KB 全文检索结果
sources/seafile.md
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---
type: "Reference"
title: "SeaFile 大文件存储索引"
openwiki_generated: true
---
# SeaFile 大文件存储索引 # SeaFile 大文件存储索引
> 数据源: SeaFile (http://10.10.10.254:9898/) 共 N 个资料库 > 数据源: SeaFile (http://10.10.10.254:9898/) 共 N 个资料库
sources/web-search.md
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@@ -2,12 +2,20 @@
type: "Reference" type: "Reference"
title: "Web Search Evidence" title: "Web Search Evidence"
description: "Compact, source-backed evidence and ingestion coverage for the web-search-1 Tavily lane tracking CelVivo, 3Brain, Cellink, and related organoid news." description: "Compact, source-backed evidence and ingestion coverage for the web-search-1 Tavily lane tracking CelVivo, 3Brain, Cellink, and related organoid news."
tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-12, 2026-08-15, 2026-08-16, 2026-08-17, 2026-08-18, 2026-08-19] tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-12, 2026-08-15, 2026-08-16, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20]
--- ---
# Web Search Evidence # Web Search Evidence
> Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on any of these seven runs. > Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on any of these eight runs.
## 2026-08-20 attempted update — skipped
- **Status:** skipped. `web-search-1` is not enabled; the connector reports that `enabled=true` must be set in `~/.openwiki/connectors/web-search/config.json`.
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-19T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 runs hit the same blocker; this is the **eighth consecutive skip on the same code path**. To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-19 attempted update — skipped ## 2026-08-19 attempted update — skipped
@@ -15,7 +23,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-18T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-18T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 runs hit the same blocker; this is the **seventh consecutive skip on the same code path**. To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state. - **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 runs hit the same blocker; the 2026-08-20 run hit the same blocker too. This was the **seventh consecutive skip on the same code path at the time of the 2026-08-19 attempt** (and the eighth skip including the 2026-08-20 follow-up). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-18 attempted update — skipped ## 2026-08-18 attempted update — skipped
@@ -23,7 +31,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-17T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-17T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 runs hit the same blocker; the 2026-08-19 run hit the same blocker too. This was the **sixth consecutive skip on the same code path at the time of the 2026-08-18 attempt** (and the seventh skip including the 2026-08-19 follow-up). - **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 runs hit the same blocker; the 2026-08-19 and 2026-08-20 runs hit the same blocker too. This was the **sixth consecutive skip on the same code path at the time of the 2026-08-18 attempt** (and the eighth skip including the 2026-08-19 and 2026-08-20 follow-ups).
## 2026-08-17 attempted update — skipped ## 2026-08-17 attempted update — skipped
@@ -31,7 +39,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-16T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-16T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 runs hit the same blocker; the 2026-08-18 and 2026-08-19 runs hit the same blocker too. This was the **fifth consecutive skip on the same code path at the time of the 2026-08-17 attempt** (and the seventh skip including the 2026-08-18 and 2026-08-19 follow-ups). - **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 runs hit the same blocker; the 2026-08-18, 2026-08-19, and 2026-08-20 runs hit the same blocker too. This was the **fifth consecutive skip on the same code path at the time of the 2026-08-17 attempt** (and the eighth skip including the 2026-08-18, 2026-08-19, and 2026-08-20 follow-ups).
## 2026-08-15 attempted update — skipped ## 2026-08-15 attempted update — skipped
@@ -39,7 +47,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, and 2026-08-12 runs hit the same blocker; the 2026-08-17, 2026-08-18, and 2026-08-19 runs hit the same blocker too. This was the fourth consecutive skip on the same code path at the time of the 2026-08-15 attempt (and the seventh skip including the 2026-08-17, 2026-08-18, and 2026-08-19 follow-ups). - **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, and 2026-08-12 runs hit the same blocker; the 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 runs hit the same blocker too. This was the fourth consecutive skip on the same code path at the time of the 2026-08-15 attempt (and the eighth skip including the 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 follow-ups).
## 2026-08-12 attempted update — skipped ## 2026-08-12 attempted update — skipped
@@ -604,3 +612,7 @@ ion commitment. No new commitment; existing commitment Notes are extended.
- **Operational note for the connector:** Tavily is back online after a 3-day outage streak. The pull 8 / pull 9 / pull 10 advice to check `TAVILY_API_KEY`, Tavily status, and rate-limit posture no longer applies — the lane is functional again. No connector-side configuration change is required. - **Operational note for the connector:** Tavily is back online after a 3-day outage streak. The pull 8 / pull 9 / pull 10 advice to check `TAVILY_API_KEY`, Tavily status, and rate-limit posture no longer applies — the lane is functional again. No connector-side configuration change is required.
- **Coverage:** fetched `2026-08-03T18:08:50.866Z`; 10 queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`. - **Coverage:** fetched `2026-08-03T18:08:50.866Z`; 10 queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`.
queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`. queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`.
.
h-1`.
penwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`.
h-1`.
sources/wikijs.md
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@@ -1,3 +1,9 @@
---
type: "Reference"
title: "Wiki.js 索引 — 跨 agent 文档发布层"
openwiki_generated: true
---
# Wiki.js 索引 — 跨 agent 文档发布层 # Wiki.js 索引 — 跨 agent 文档发布层
> 数据源: Wiki.js (http://10.10.10.254:3000/graphql) Biokingdom 实例 > 数据源: Wiki.js (http://10.10.10.254:3000/graphql) Biokingdom 实例
themes.md
+1 -1
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@@ -13,7 +13,7 @@ Index kept narrow by design: only themes that map to Robin's actual work (life-s
| Topic key | Theme / Signal | First seen | Last seen | Confidence | Sources | Evidence count | Status | Evidence | | Topic key | Theme / Signal | First seen | Last seen | Confidence | Sources | Evidence count | Status | Evidence |
| --- | --- | --- | --- | --- | --- | --- | --- | --- | | --- | --- | --- | --- | --- | --- | --- | --- | --- |
| `class-organoid-3d-bioprinting` | Recurring organoid, 3D bioprinting, and 3D-cell-culture automation coverage; this window adds a 2026-07-28 HN drug-discovery essay (owlposting "Why haven't organoids solved all of drug discovery?", 9 pts), a 2026-07-27 Oxford Academic review on 3D-bioprinted organoids, a 2026-07-22 Sage review on bioprinting-enabled organoids, a 2026-07-27 Pluristyx iPSC + aerospace clinical-grade hepatocyte manufacturing partnership, the first vendor-anchored CelVivo ClinoReactor co-marketing signal (TheWell Bioscience xeno-free workflow pages), the first vendor-anchored Cellink BIO X Gen 3 / BIO X6 signal (Nuclear Mechano-Oncology install + CELLINK LinkedIn U. Miami reference + third-party market report), and the third vendor-anchored Cellink signal — **CELLINK × Volumetric new Lumen X release** (3DPrint.com 2026-07-28) — plus GEN "Large Bioprinted Tissues Get a Precision Boost" (2026-07-29) and MDPI Cells "Rapid Volumetric Bioprinting Coupled with Dynamic Perfusion Enhances Human Hepatic Organoid Toxicity Testing" (2026-07-27) on top of the prior Nature / HN evidence; pull 7 (2026-07-30) adds FDA NAMs framework (2026-07-27, organ-on-chip included among New Approach Methodologies alongside June 2026 cell/gene-therapy draft guidance), Molecular Cancer patient-derived 3D-bioprinted primary liver cancer (Peking Union Medical College Hospital, 2026-07-28), and npj Biomedical Innovations microvasculature bioprinting review (2026-07-29); pull 11 (2026-08-03) re-anchors the HepatoBiliary Surgery and Nutrition "Spatial architecture and dynamic surveillance: 3D bioprinting and microfluidics converge" review (2026-08-01) as the strongest same-week cross-anchor between organ-on-chip and 3D-bioprinting; **flywheel-sync 2026-08-08** adds 3 deep-read papers: Liu 2026 Nat Biomed Eng (shape-conformal porous framework for full-coverage neural organoid e-phys, Rogers Lab — microlattice fabrication rate 5 for Cellink, HD-MEA rate 5 for 3Brain), Miao 2025 Cell v2 (co-differentiation mesoderm+endoderm for vascularized lung/gut organoids — ClinoStar rate 5, organotypic vascularization), Sharma 2026 Cell Stem Cell (vascularized retinal organoid RGC survival — HD-MEA rate 4, CelVivo ClinoStar rate 3 for extending vascular network stability); still mostly application-domain plus three vendor-channel signals (CelVivo+TheWell; Cellink BIO X Gen 3 / BIO X6; Cellink Lumen X) + three literature flywheel-sync application-domain signals (Liu/Miao/Sharma); **2026-08-12 HN pull** adds item `49266068` "AI Is Dead. Organoids Are Alive" (5 pts, Wired, by `Logans_Run`) on lab-grown brain organoids vs silicon AI — application-domain reinforcement of the organoid + neuroscience-in-vitro intersection that the 2026-07-27 Nature biocomputing article (`49071596`) and the 2026-07-28 owlposting drug-discovery essay (`49083799`) already speak to | 2026-07-16 | 2026-08-12 | source-backed | hackernews, web-search, literature-flywheel | 27+ | active | [HN: 49083799 drug-discovery essay 2026-07-28](/sources/hackernews.md); [HN: 49266068 Wired "AI Is Dead. Organoids Are Alive" 2026-08-12](/sources/hackernews.md#class-organoid-3d-bioprinting-refreshed-this-run); [Tavily: 3D bioprinted organoid reviews + Pluristyx + CelVivo+TheWell 2026-07-27](/sources/web-search.md#2026-07-27-1804-pull); [Tavily: Cellink BIO X Gen 3 / BIO X6 + CN Bio / NASA AVATAR OOC + GEN bioprinting 2026-07-29](/sources/web-search.md#2026-07-29-1803-pull); [Tavily: FDA NAMs + Peking Union 3D-bioprinted liver cancer + npj microvasculature 2026-07-30](/sources/web-search.md#2026-07-30-1804-pull); [Tavily: Cellink × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 + HBSN bioprinting+microfluidics 2026-08-03](/sources/web-search.md#2026-08-03-1808-pull); [Flywheel: Liu 2026 NBME shape-conformal framework + Miao 2025 Cell v2 vascularized organoids + Sharma 2026 Cell Stem Cell vascularized retinal organoids 2026-08-08](/sources/literature.md) | | `class-organoid-3d-bioprinting` | Recurring organoid, 3D bioprinting, and 3D-cell-culture automation coverage; this window adds a 2026-07-28 HN drug-discovery essay (owlposting "Why haven't organoids solved all of drug discovery?", 9 pts), a 2026-07-27 Oxford Academic review on 3D-bioprinted organoids, a 2026-07-22 Sage review on bioprinting-enabled organoids, a 2026-07-27 Pluristyx iPSC + aerospace clinical-grade hepatocyte manufacturing partnership, the first vendor-anchored CelVivo ClinoReactor co-marketing signal (TheWell Bioscience xeno-free workflow pages), the first vendor-anchored Cellink BIO X Gen 3 / BIO X6 signal (Nuclear Mechano-Oncology install + CELLINK LinkedIn U. Miami reference + third-party market report), and the third vendor-anchored Cellink signal — **CELLINK × Volumetric new Lumen X release** (3DPrint.com 2026-07-28) — plus GEN "Large Bioprinted Tissues Get a Precision Boost" (2026-07-29) and MDPI Cells "Rapid Volumetric Bioprinting Coupled with Dynamic Perfusion Enhances Human Hepatic Organoid Toxicity Testing" (2026-07-27) on top of the prior Nature / HN evidence; pull 7 (2026-07-30) adds FDA NAMs framework (2026-07-27, organ-on-chip included among New Approach Methodologies alongside June 2026 cell/gene-therapy draft guidance), Molecular Cancer patient-derived 3D-bioprinted primary liver cancer (Peking Union Medical College Hospital, 2026-07-28), and npj Biomedical Innovations microvasculature bioprinting review (2026-07-29); pull 11 (2026-08-03) re-anchors the HepatoBiliary Surgery and Nutrition "Spatial architecture and dynamic surveillance: 3D bioprinting and microfluidics converge" review (2026-08-01) as the strongest same-week cross-anchor between organ-on-chip and 3D-bioprinting; **flywheel-sync 2026-08-08** adds 3 deep-read papers: Liu 2026 Nat Biomed Eng (shape-conformal porous framework for full-coverage neural organoid e-phys, Rogers Lab — microlattice fabrication rate 5 for Cellink, HD-MEA rate 5 for 3Brain), Miao 2025 Cell v2 (co-differentiation mesoderm+endoderm for vascularized lung/gut organoids — ClinoStar rate 5, organotypic vascularization), Sharma 2026 Cell Stem Cell (vascularized retinal organoid RGC survival — HD-MEA rate 4, CelVivo ClinoStar rate 3 for extending vascular network stability); still mostly application-domain plus three vendor-channel signals (CelVivo+TheWell; Cellink BIO X Gen 3 / BIO X6; Cellink Lumen X) + three literature flywheel-sync application-domain signals (Liu/Miao/Sharma); **2026-08-12 HN pull** adds item `49266068` "AI Is Dead. Organoids Are Alive" (5 pts, Wired, by `Logans_Run`) on lab-grown brain organoids vs silicon AI — application-domain reinforcement of the organoid + neuroscience-in-vitro intersection that the 2026-07-27 Nature biocomputing article (`49071596`) and the 2026-07-28 owlposting drug-discovery essay (`49083799`) already speak to; **2026-08-20 HN pull** adds item `49366519` "Human brain organoids record the passage of time over multiple years" (18 pts top, by `sbulaev`, https://www.nature.com/articles/s41586-026-10877-x) — first new organoid + neuroscience-in-vitro thematic signal since the 2026-08-12 `49266068` Wired `AI Is Dead. Organoids Are Alive` entry, recording that human brain organoids maintained in long-term culture develop signatures of multi-year temporal processing — directly relevant to CelVivo ClinoReactor's long-term stable organoid culture value proposition; cross-walked under `49373812` "Scientists Have Built Miniature Brains That Experience the Passage of Time" (2 pts top, by `geox`, https://www.sciencealert.com/unprecedented-scientists-have-built-miniature-brains-that-experience-the-passage-of-time — Science Alert user-press write-up of the same Nature s41586-026-10877-x paper); **second neural-organoid HN signal in 9 pulls** (after the 2026-07-27 Nature biocomputing article `49071596` and the 2026-08-12 Wired `49266068`), qualifying for Last-seen refresh by the recurrence criterion alone | 2026-07-16 | 2026-08-20 | source-backed | hackernews, web-search, literature-flywheel | 28+ | active | [HN: 49083799 drug-discovery essay 2026-07-28](/sources/hackernews.md); [HN: 49266068 Wired "AI Is Dead. Organoids Are Alive" 2026-08-12](/sources/hackernews.md#class-organoid-3d-bioprinting-refreshed-this-run); [HN: 49366519 Nature brain-organoid time-passage paper 2026-08-20](/sources/hackernews.md#flag-for-traceability-nature-brain-organoid-time-passage-paper-in-scope-organoid-theme-refresh-anthropic-claude-code-agentsmd-feature-request-openwik-agentsmd-standard-cross-walk-unsloth-dynamic-30-ggufs-minimax-m3-gguf-upstream-science-alert-miniature-brains-organoid-paper-cross-walked-under-49366519--adjacent--1-promoted-to-class-organoid-3d-bioprinting-last-seen); [Tavily: 3D bioprinted organoid reviews + Pluristyx + CelVivo+TheWell 2026-07-27](/sources/web-search.md#2026-07-27-1804-pull); [Tavily: Cellink BIO X Gen 3 / BIO X6 + CN Bio / NASA AVATAR OOC + GEN bioprinting 2026-07-29](/sourcesLine truncated
| `china-cde-cell-gene-therapy-rules-2026` | China CDE (under NMPA) published technical guidelines defining scope & classification of cell and gene therapy drugs; standardizes CMC planning for Chinese pharma/CDMO/biotech customers | 2026-07-24 | 2026-07-24 | source-backed | web-search | 1 | watchlist | [Tavily: cisema.com 2026-07-24](/sources/web-search.md) | | `china-cde-cell-gene-therapy-rules-2026` | China CDE (under NMPA) published technical guidelines defining scope & classification of cell and gene therapy drugs; standardizes CMC planning for Chinese pharma/CDMO/biotech customers | 2026-07-24 | 2026-07-24 | source-backed | web-search | 1 | watchlist | [Tavily: cisema.com 2026-07-24](/sources/web-search.md) |
| `china-order-no-818-clinical-translation` | China's Order No. 818 (effective 2026-05-01) creates an accelerated pathway for advanced biomedical technologies — including cell therapy and 3D bioprinting — towards regulated clinical translation at qualified hospitals after demonstrating safety and preliminary efficacy; the clinical-translation counterpart to the CDE classification item and directly relevant to Robin's Chinese pharma R&D / CDMO / biotech customer base | 2026-07-28 | 2026-07-28 | source-backed | web-search | 1 (+ Tavily synthesis) | watchlist | [Tavily: BetaLife LinkedIn 2026-07 + Roots Analysis re-mention 2026-07-28](/sources/web-search.md) | | `china-order-no-818-clinical-translation` | China's Order No. 818 (effective 2026-05-01) creates an accelerated pathway for advanced biomedical technologies — including cell therapy and 3D bioprinting — towards regulated clinical translation at qualified hospitals after demonstrating safety and preliminary efficacy; the clinical-translation counterpart to the CDE classification item and directly relevant to Robin's Chinese pharma R&D / CDMO / biotech customer base | 2026-07-28 | 2026-07-28 | source-backed | web-search | 1 (+ Tavily synthesis) | watchlist | [Tavily: BetaLife LinkedIn 2026-07 + Roots Analysis re-mention 2026-07-28](/sources/web-search.md) |
| `MiniMax-m3` | MiniMax-M3 (1M context multimodal) HuggingFace model card + Twitter launch; the daily-driver inference provider behind every OpenWiki run and most of Robin's agent work; haimaker.ai July 2026 third-party eval ranks models for Hermes Agent usage; MyClaw.ai 2026-07-29 confirms M3 + M2.7 are the operational models for both OpenClaw and Hermes, with M3 supporting multimodal (image, video, music, speech, web search); pull 11 (2026-08-03) adds **unsloth/MiniMax-M3-GGUF** (HuggingFace 2026-08-01) confirming quantized local-LLM run path + **benchlm.ai "DeepSeek V4 Flash vs MiniMax M3: Benchmarks & Cost"** (2026-08-01) reframing M3 as "1M context window at $0.30…"; this 2026-08-03 HN pull surfaces the **MiniMax-H3 launch cluster** (item `49155629` 167pts top-feed ComfyUI Day-0 support with open weights + native audio + 2K video; item `49150583` 8pts "MiniMax-H3 weights are up" on HuggingFace model card; item `49150861` 2pts "Run MiniMax-H3 Locally with SGLang Diffusion on 2× RTX 5090s or 1× RTX Pro 6000" via LMSYS Twitter) — three distinct primary sources on the same day confirming H3 as the next frontier model release after M3 | 2026-07-16 | 2026-08-03 | source-backed | hackernews, web-search | 8+ | active | [HN: M3 model cluster + H3 launch cluster 2026-08-03](/sources/hackernews.md); [Tavily: Hermes Agent best-models eval](/sources/web-search.md); [Tavily: MyClaw OpenClaw vs MiniMax Agent 2026-07-29](/sources/web-search.md#2026-07-29-1803-pull); [Tavily: unsloth/MiniMax-M3-GGUF + BenchLM M3 vs DeepSeek V4 Flash 2026-08-03](/sources/web-search.md#2026-08-03-1808-pull) | | `MiniMax-m3` | MiniMax-M3 (1M context multimodal) HuggingFace model card + Twitter launch; the daily-driver inference provider behind every OpenWiki run and most of Robin's agent work; haimaker.ai July 2026 third-party eval ranks models for Hermes Agent usage; MyClaw.ai 2026-07-29 confirms M3 + M2.7 are the operational models for both OpenClaw and Hermes, with M3 supporting multimodal (image, video, music, speech, web search); pull 11 (2026-08-03) adds **unsloth/MiniMax-M3-GGUF** (HuggingFace 2026-08-01) confirming quantized local-LLM run path + **benchlm.ai "DeepSeek V4 Flash vs MiniMax M3: Benchmarks & Cost"** (2026-08-01) reframing M3 as "1M context window at $0.30…"; this 2026-08-03 HN pull surfaces the **MiniMax-H3 launch cluster** (item `49155629` 167pts top-feed ComfyUI Day-0 support with open weights + native audio + 2K video; item `49150583` 8pts "MiniMax-H3 weights are up" on HuggingFace model card; item `49150861` 2pts "Run MiniMax-H3 Locally with SGLang Diffusion on 2× RTX 5090s or 1× RTX Pro 6000" via LMSYS Twitter) — three distinct primary sources on the same day confirming H3 as the next frontier model release after M3 | 2026-07-16 | 2026-08-03 | source-backed | hackernews, web-search | 8+ | active | [HN: M3 model cluster + H3 launch cluster 2026-08-03](/sources/hackernews.md); [Tavily: Hermes Agent best-models eval](/sources/web-search.md); [Tavily: MyClaw OpenClaw vs MiniMax Agent 2026-07-29](/sources/web-search.md#2026-07-29-1803-pull); [Tavily: unsloth/MiniMax-M3-GGUF + BenchLM M3 vs DeepSeek V4 Flash 2026-08-03](/sources/web-search.md#2026-08-03-1808-pull) |
themes/05-robin-research.md
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@@ -2,8 +2,8 @@
type: "Reference" type: "Reference"
title: "Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)" title: "Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)"
description: "Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting)." description: "Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting)."
tags: [theme, research, vault, deep-read, sales, crm, life-sciences, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13] tags: [theme, research, vault, deep-read, sales, crm, life-sciences, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13]
timestamp: 2026-08-19T18:08:24Z timestamp: 2026-08-20T18:09:15Z
--- ---
# Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM) # Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)
@@ -51,19 +51,19 @@ The diagram shows Robin's research substrate: a single Obsidian vault with 8 buc
## Knowledge substrate: Obsidian vault ## Knowledge substrate: Obsidian vault
Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-19T18:08:24Z): Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-20T18:09:15Z):
| Field | Value | | Field | Value |
| --- | --- | | --- | --- |
| Repo path | `/home/ldw/workspace` | | Repo path | `/home/ldw/workspace` |
| Branch | `main` | | Branch | `main` |
| HEAD | `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (**unchanged** at the 2026-08-19T18:08Z fetch — **0 new vault commits** in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window; vault is silent for the **3rd consecutive fetch** after the 2026-08-17T18:09Z + 2026-08-18T18:10Z silent windows; **3 calendar days stale** since the last vault HEAD bump on 2026-08-16; the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most recent vault activity) | | HEAD | `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (**unchanged** at the 2026-08-20T18:09Z fetch — **0 new vault commits** in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window; vault is silent for the **4th consecutive fetch** after the 2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z silent windows; **4 calendar days stale** since the last vault HEAD bump on 2026-08-16; the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most recent vault activity) |
| Ahead of origin/main | 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17 + 2026-08-18 + 2026-08-19 fetches) | | Ahead of origin/main | 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17 + 2026-08-18 + 2026-08-19 fetches) |
| Auth | local path only — no remote, no credentials | | Auth | local path only — no remote, no credentials |
| Working-tree state | dirty (23 untracked files + 2 new untracked directories — `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` — both untracked; the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still-uncommitted, carrying forward from the 2026-08-13 fetch, **8-day carry-forward** at the 2026-08-19T18:08Z fetch — **6 fetches silent** on the file) | | Working-tree state | dirty (23 untracked files + 2 new untracked directories — `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` — both untracked; the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still-uncommitted, carrying forward from the 2026-08-13 fetch, **9-day carry-forward** at the 2026-08-20T18:09Z fetch — **7 fetches silent** on the file) |
| Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-19T18-08-24-164Z/manifest.json` | | Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-20T18-09-15-122Z/manifest.json` |
| **Latest cluster (2026-08-16, replacing the 2026-08-12 Liang 2026 cluster)** | **Quintard 2024 Nat Commun + Guo 2026 Front Cell Dev Biol 7-commit LDR cluster** (`0fc8db24` Quintard adds file 189 lines → `290e9635` -v2 → `24c713de` -v3 → `4073abf4` -v4 → `2e6f5989` Guo adds file 170 lines → `00f824f2` -v2 → `a4fa5a32` -v3) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3-轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型) | | **Latest cluster (2026-08-16, replacing the 2026-08-12 Liang 2026 cluster)** | **Quintard 2024 Nat Commun + Guo 2026 Front Cell Dev Biol 7-commit LDR cluster** (`0fc8db24` Quintard adds file 189 lines → `290e9635` -v2 → `24c713de` -v3 → `4073abf4` -v4 → `2e6f5989` Guo adds file 170 lines → `00f824f2` -v2 → `a4fa5a32` -v3) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3-轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型) |
| **Latest uncommitted artifact (2026-08-13 → 2026-08-19, multi-file, unchanged at the 2026-08-19T18:08Z fetch)** | `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` (carry-forward untracked from 2026-08-13, now at **8-day carry-forward** at the 2026-08-19 fetch — file mtime `2026-08-11 16:31:54 +0800` so mtime-based carry-forward is 8 days; first-observation-date-based carry-forward is 6 days; **structural signal continuing to weaken** per `/sources/git-repo.md` Notable-entity entry — 6 consecutive fetches silent on the file; subfolder is more likely a one-off than a recurring pattern) + **2 new untracked directories added at the 2026-08-17 fetch**, still-uncommitted at the 2026-08-19 fetch (**3-day carry-forward** each): `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder) + `templates/类器官IRB申请清单.md` (180-line IRB application checklist derived from Guo 2026; Robin's first customer-facing template produced from a single deep-read — see the new Templates subtree below) | | **Latest uncommitted artifact (2026-08-13 → 2026-08-20, multi-file, unchanged at the 2026-08-20T18:09Z fetch)** | `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` (carry-forward untracked from 2026-08-13, now at **9-day carry-forward** at the 2026-08-20 fetch — file mtime `2026-08-11 16:31:54 +0800` so mtime-based carry-forward is 9 days; first-observation-date-based carry-forward is 7 days; **structural signal continuing to weaken** per `/sources/git-repo.md` Notable-entity entry — 7 consecutive fetches silent on the file; subfolder is more likely a one-off than a recurring pattern) + **2 new untracked directories added at the 2026-08-17 fetch**, still-uncommitted at the 2026-08-20 fetch (**4-day carry-forward** each — was 3-day at the 2026-08-19 fetch): `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder) + `templates/类器官IRB申请清单.md` (180-line IRB application checklist derived from Guo 2026; Robin's first customer-facing template produced from a single deep-read — see the new Templates subtree below) |
### Vault navigation index (top-level folders) ### Vault navigation index (top-level folders)
@@ -110,9 +110,9 @@ Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08
| `Retinal/` | 1 | retinal organoid | | `Retinal/` | 1 | retinal organoid |
| `Microbioreactor/` | 1 | Rosero 2026 Front Bioeng Biotechnol (added 2026-08-07) | | `Microbioreactor/` | 1 | Rosero 2026 Front Bioeng Biotechnol (added 2026-08-07) |
| `Cells/` | 1 | Fernandez Vallone 2026 Cells THSDC (added 2026-08-08) | | `Cells/` | 1 | Fernandez Vallone 2026 Cells THSDC (added 2026-08-08) |
| `Review/` | 1 | Zhou 2023 computer vision + microfluidics (added 2026-08-13, **untracked**, **8-day carry-forward** at 2026-08-19 fetch — **6 fetches silent** — structural signal continuing to weaken) | | `Review/` | 1 | Zhou 2023 computer vision + microfluidics (added 2026-08-13, **untracked**, **9-day carry-forward** at 2026-08-20 fetch (was 8-day at 2026-08-19) — **7 fetches silent** — structural signal continuing to weaken) |
| `Templates/` | 1 | `类器官IRB申请清单.md` v1.0 (2026-08-16, derived from Guo 2026 ethics deep-read, **untracked**; first customer-facing template produced from a single deep-read; **3-day carry-forward** at 2026-08-19 fetch) | | `Templates/` | 1 | `类器官IRB申请清单.md` v1.0 (2026-08-16, derived from Guo 2026 ethics deep-read, **untracked**; first customer-facing template produced from a single deep-read; **4-day carry-forward** at 2026-08-20 fetch — was 3-day at 2026-08-19) |
| `CelVivo-commercial/` | 1 | `1331651_20260630_131201.pdf` (2026-06-30 quote PDF migrated into new folder 2026-08-17, **untracked**; **3-day carry-forward** at 2026-08-19 fetch) | | `CelVivo-commercial/` | 1 | `1331651_20260630_131201.pdf` (2026-06-30 quote PDF migrated into new folder 2026-08-17, **untracked**; **4-day carry-forward** at 2026-08-20 fetch — was 3-day at 2026-08-19) |
Total ≈ 1,206 deep-read notes on `main` + **1 untracked entry in the new `Review/` subfolder** (`zhou2023_computer_vision_microfluidics.md`, 2026-08-13 — first review-type subfolder; future-commit candidate) + **2 new untracked directories** (`templates/类器官IRB申请清单.md` + `celvivo_commercial/1331651_20260630_131201.pdf`, 2026-08-17). The 4 vendor subfolders (Celvivo / 3Brain / Cellink / Organoid) cover the canonical product KB per the wiki goal focus areas. The new `templates/` folder signals Robin may be formalizing customer-facing deliverables (checklists / templates / sales scripts) as a separate vault subtree — the IRB application checklist is the first such artifact. Total ≈ 1,206 deep-read notes on `main` + **1 untracked entry in the new `Review/` subfolder** (`zhou2023_computer_vision_microfluidics.md`, 2026-08-13 — first review-type subfolder; future-commit candidate) + **2 new untracked directories** (`templates/类器官IRB申请清单.md` + `celvivo_commercial/1331651_20260630_131201.pdf`, 2026-08-17). The 4 vendor subfolders (Celvivo / 3Brain / Cellink / Organoid) cover the canonical product KB per the wiki goal focus areas. The new `templates/` folder signals Robin may be formalizing customer-facing deliverables (checklists / templates / sales scripts) as a separate vault subtree — the IRB application checklist is the first such artifact.