chore: daily update 2026-08-21

This commit is contained in:
OpenWiki Bot
2026-08-21 02:27:31 +08:00
parent bd30339182
commit b6dc337830
13 changed files with 299 additions and 126 deletions
+1 -1
View File
@@ -1,5 +1,5 @@
{ {
"updatedAt": "2026-08-19T18:15:52.460Z", "updatedAt": "2026-08-20T18:27:31.629Z",
"command": "update", "command": "update",
"model": "MiniMax-M3", "model": "MiniMax-M3",
"status": "complete", "status": "complete",
+11 -5
View File
File diff suppressed because one or more lines are too long
+6 -6
View File
@@ -13,9 +13,9 @@ Per-connector evidence indexes. Each connector gets its own page (for example `g
| Connector | Page | Status | | Connector | Page | Status |
| --- | --- | --- | | --- | --- | --- |
| Hacker News (`hackernews-1`, LLM-agent topics) | [/sources/hackernews.md](/sources/hackernews.md) | active (last 2026-08-19 18:00 UTC — eighth pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries; two adjacents worth flagging for traceability: `49364559` OpenRouter Is Joining Stripe (6 pts, OpenRouter's own blog post confirming the 2026-08-17 rumor) + `49363710` Launch HN: OneCLI (YC S26) (21 pts, cites Hermes/OpenClaw/NanoClaw in submitter text)) | | Hacker News (`hackernews-1`, LLM-agent topics) | [/sources/hackernews.md](/sources/hackernews.md) | active (last 2026-08-20 18:00 UTC — ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries but with two application-domain thematic hits (`49366519` Nature brain-organoid time-passage paper + `49373812` Science Alert cross-walk) on the `organoid`/`3Brain` lanes; `class-organoid-3d-bioprinting` Last-seen refresh 2026-08-12 → 2026-08-20; two named-stack-adjacent items flagged for traceability: `49367350` "Feature Request: Support AGENTS.md" 340 pts (Claude Code issue requesting native `AGENTS.md` standard support — same AGENTS.md standard referenced in OpenWiki's ROOT_SYSTEM_POLICY) + `49365443` "Unsloth Dynamic 3.0 GGUFs" 314 pts (Unsloth quantization-format release upstream of `unsloth/MiniMax-M3-GGUF`)) |
| Git repo (`git-repo-1`, Obsidian vault + OpenWiki wiki) | [/sources/git-repo.md](/sources/git-repo.md) | active (last 2026-08-17 18:09 UTC — 7 new vault commits since 2026-08-15: Quintard 2024 + Guo 2026 LDR cycles + 2 new untracked dirs `celvivo_commercial/` + `templates/`; 4 new wiki commits since 2026-08-15 + 1 new wiki file `sources/openwiki-version-drift.md`) | | Git repo (`git-repo-1`, Obsidian vault + OpenWiki wiki) | [/sources/git-repo.md](/sources/git-repo.md) | active (last 2026-08-20 18:09 UTC — 0 new vault commits since 2026-08-19T18:08Z fetch (vault silent for the 4th consecutive fetch); 2 new automated wiki commits since 2026-08-19T18:08Z fetch (`a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20, the sixth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern)) |
| Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing) | | Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing) |
Additional connectors appear here automatically once they are authenticated and ingested at least once. Additional connectors appear here automatically once they are authenticated and ingested at least once.
@@ -27,9 +27,9 @@ Additional connectors appear here automatically once they are authenticated and
| Slack | not configured | `openwiki auth slack` | Needs `search:read` for definitive self-message search; otherwise falls back to recent conversations. | | Slack | not configured | `openwiki auth slack` | Needs `search:read` for definitive self-message search; otherwise falls back to recent conversations. |
| Notion | not configured | Notion MCP credentials | Discovery via `openwiki_list_mcp_tools`; do not guess tool names. | | Notion | not configured | Notion MCP credentials | Discovery via `openwiki_list_mcp_tools`; do not guess tool names. |
| X / Twitter | not configured | `OPENWIKI_X_ACCESS_TOKEN` via `openwiki auth x` | Streams: `home_timeline`, `user_posts`, `mentions`, `bookmarks`, `list_posts`. | | X / Twitter | not configured | `OPENWIKI_X_ACCESS_TOKEN` via `openwiki auth x` | Streams: `home_timeline`, `user_posts`, `mentions`, `bookmarks`, `list_posts`. |
| Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts were skipped because the connector was not enabled in the runtime registry. Evidence at [/sources/web-search.md](/sources/web-search.md). | | Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 update attempts were skipped because the connector was not enabled in the runtime registry. Evidence at [/sources/web-search.md](/sources/web-search.md). |
| Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Source-specific query set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` (LLM-agent topics per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories"). Last successful pull 2026-08-19 18:00 UTC — **eighth pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-19 pull returns to fully-zero across all four vendor queries + the two workflow queries; empty-pulls-on-vendor-queries is normal cadence, not an outage). Adjacents flagged for traceability this run: `49364559` OpenRouter Is Joining Stripe (6 pts, formal confirmation of the 2026-08-17 rumored acquisition) + `49363710` Launch HN: OneCLI (YC S26) (21 pts, cites Hermes/OpenClaw/NanoClaw in submitter text). The combined machine0 (2026-08-18) + OneCLI (2026-08-19) cluster is the strongest two-pull named-stack-cross-walk density since the 2026-08-13 DeepSeek Harness + Codex Linux desktop combination. Evidence at [/sources/hackernews.md](/sources/hackernews.md). | | Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Source-specific query set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` (LLM-agent topics per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories"). Last successful pull 2026-08-20 18:00 UTC — **ninth pull since 2026-08-07 with an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 + 2026-08-19 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-20 pull reverts to the noise-only pattern on the 4 vendor queries but with **two application-domain thematic hits**`49366519` organoid + `49373812` miniature-brains — **the first pull in the 9-pull streak to surface a thematic on the `organoid`/`3Brain` Algolia lanes since the 2026-08-12 `49266068` Wired feature**; empty-pulls-on-vendor-queries is normal cadence, not an outage). The 2026-08-20 pull produces a `class-organoid-3d-bioprinting` theme-row Last-seen refresh 2026-08-12 → 2026-08-20 via the recurrence criterion (the `49366519` Nature organoid-time-passage paper 18 pts + `49373812` Science Alert cross-walk — second neural-organoid HN signal in 9 pulls); two named-stack-adjacent items flagged for traceability: `49367350` "Feature Request: Support AGENTS.md" 340 pts (Claude Code issue requesting native `AGENTS.md` standard support — same AGENTS.md standard referenced in OpenWiki's ROOT_SYSTEM_POLICY; the **first HN signal since the 2026-07-16 `langchain-ai/openwiki` brand entry to surface the `AGENTS.md` standard explicitly**) + `49365443` "Unsloth Dynamic 3.0 GGUFs" 314 pts (Unsloth quantization-format release upstream of `unsloth/MiniMax-M3-GGUF` cited on the `MiniMax-m3` row). Both adjacents stay adjacent-not-promoted per scope discipline. Evidence at [/sources/hackernews.md](/sources/hackernews.md). |
| Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-18 18:10 UTC — **0 new vault commits in the 24-hour window** (vault silent; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity); 2 new automated wiki commits since the 2026-08-17 fetch (`8127797` daily update 2026-08-18 + `1fc73ae` sources-sync 2026-08-18, the fourth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern). | | Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-20 18:09 UTC — **0 new vault commits in the 24-hour window** (vault silent for the 4th consecutive fetch; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **4 calendar days stale**); 2 new automated wiki commits since the 2026-08-19 fetch (`a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20, the **sixth** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + now `bd30339` 2026-08-20). |
## How new source pages get created ## How new source pages get created
+188 -92
View File
@@ -1,10 +1,10 @@
--- ---
type: "Reference" type: "Reference"
title: "Git repo — evidence index (Obsidian vault, Robin)" title: "Git repo — evidence index (Obsidian vault, Robin)"
description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, **0 new vault commits in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window — vault is silent for the 3rd consecutive fetch**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD dcb53a2, 2026-08-19, **2 new automated wiki commits in the 2026-08-18T18:10Z → 2026-08-19T18:08Z window: `7e904ec` daily update 2026-08-19 + `dcb53a2` sources-sync 2026-08-19 — the fifth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here." description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, **0 new vault commits in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window — vault is silent for the 4th consecutive fetch after the 2026-08-16 Quintard + Guo cluster**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD bd30339, 2026-08-20, **2 new automated wiki commits in the 2026-08-19T18:08Z → 2026-08-20T18:09Z window: `a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20 — the sixth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
resource: "~/.openwiki/connectors/git-repo/config.json" resource: "~/.openwiki/connectors/git-repo/config.json"
tags: [git-repo, evidence, vault, openwiki-wiki, source, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13] tags: [git-repo, evidence, vault, openwiki-wiki, source, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13]
timestamp: 2026-08-19T18:08:24Z timestamp: 2026-08-20T18:09:15Z
--- ---
# Git repo — evidence index (Obsidian vault + OpenWiki wiki) # Git repo — evidence index (Obsidian vault + OpenWiki wiki)
@@ -47,52 +47,57 @@ help locate things in the vault, not summarize their content.
the 4 sources-syncs (`997b648` + `be49285` + `1fc73ae` + `dcb53a2`) the 4 sources-syncs (`997b648` + `be49285` + `1fc73ae` + `dcb53a2`)
all re-applied the `2507925` 2026-08-15 count-data wipe pattern). all re-applied the `2507925` 2026-08-15 count-data wipe pattern).
- **Auth:** local paths only — no remote, no credentials. - **Auth:** local paths only — no remote, no credentials.
- **Latest fetch:** `2026-08-19T18:08:24Z` (raw manifest - **Latest fetch:** `2026-08-20T18:09:15Z` (raw manifest
`~/.openwiki/connectors/git-repo/raw/2026-08-19T18-08-24-164Z/manifest.json`). `~/.openwiki/connectors/git-repo/raw/2026-08-20T18-09-15-122Z/manifest.json`).
- **Source config:** `~/.openwiki/connectors/git-repo/config.json` - **Source config:** `~/.openwiki/connectors/git-repo/config.json`
- **State:** `~/.openwiki/connectors/git-repo/state.json` records - **State:** `~/.openwiki/connectors/git-repo/state.json` records
`latestIds` per repo; the 2026-08-19T18:08Z fetch observed vault HEAD `latestIds` per repo; the 2026-08-20T18:09Z fetch observed vault HEAD
unchanged at `a4fa5a32` (2026-08-16 — same as the 2026-08-17T18:09Z + unchanged at `a4fa5a32` (2026-08-16 — same as the 2026-08-17T18:09Z +
2026-08-18T18:10Z + 2026-08-19T18:08Z fetches; **0 new vault commits 2026-08-18T18:10Z + 2026-08-19T18:08Z + 2026-08-20T18:09Z fetches;
in the 24-hour window — vault is silent for the 3rd consecutive **0 new vault commits in the 24-hour window — vault is silent for
fetch**), and observed `openwiki-wiki` bumped from `1fc73ae` the 4th consecutive fetch** after the 2026-08-16 Quintard + Guo
(2026-08-18T18:10Z fetch) to `dcb53a2` (2 new automated wiki commits cluster), and observed `openwiki-wiki` bumped from `dcb53a2`
in the 24-hour window: `7e904ec` daily update 2026-08-19 + (2026-08-19T18:08Z fetch) to `bd30339` (2 new automated wiki commits
`dcb53a2` sources-sync 2026-08-19 — the **fifth** consecutive in the 24-hour window: `a44f284` daily update 2026-08-20 +
`bd30339` sources-sync 2026-08-20 — the **sixth** consecutive
sources-sync re-applying the 2026-08-15 count-data wipe pattern sources-sync re-applying the 2026-08-15 count-data wipe pattern
after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae`
2026-08-18). 2026-08-18 + `dcb53a2` 2026-08-19 + now `bd30339` 2026-08-20).
## obsidian-vault — working-tree status (2026-08-19) ## obsidian-vault — working-tree status (2026-08-20)
- **Branch:** `main` - **Branch:** `main`
- **HEAD:** `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (vault HEAD - **HEAD:** `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (vault HEAD
**unchanged** at `a4fa5a32` across the 2026-08-19T18:08Z fetch — **unchanged** at `a4fa5a32` across the 2026-08-20T18:09Z fetch —
**0 new commits** in the 2026-08-18T18:10Z → 2026-08-19T18:08Z **0 new commits** in the 2026-08-19T18:08Z → 2026-08-20T18:09Z
24-hour window; the vault is silent for the **3rd consecutive 24-hour window; the vault is silent for the **4th consecutive
fetch** after the 2026-08-17T18:09Z + 2026-08-18T18:10Z silent fetch** after the 2026-08-17T18:09Z + 2026-08-18T18:10Z +
windows. The 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR 2026-08-19T18:08Z silent windows. The 2026-08-16 Quintard 2024
cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol
the most recent committed vault activity (vault HEAD last bumped 3-commit LDR cycle remain the most recent committed vault
on 2026-08-16, **3 calendar days before this fetch** — same state activity (vault HEAD last bumped on 2026-08-16, **4 calendar
as the 2026-08-17T18:09Z + 2026-08-18T18:10Z fetches). days before this fetch** — same state as the
2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z
fetches).
- **mtime activity in window:** **0 new mtime changes** in the - **mtime activity in window:** **0 new mtime changes** in the
2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window. The 2 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window. The 2
untracked dirs from the 2026-08-17T18:09Z fetch are unchanged: untracked dirs from the 2026-08-17T18:09Z fetch are unchanged:
`celvivo_commercial/` last touched 2026-08-17 15:04 +0800 (= 07:04 `celvivo_commercial/` last touched 2026-08-17 15:04 +0800 (= 07:04
UTC, **before** the 24h window) + `templates/` last touched UTC, **before** the 24h window) + `templates/` last touched
2026-08-16 10:27 +0800 (= 02:27 UTC, well before the window). The 2026-08-16 10:27 +0800 (= 02:27 UTC, well before the window). The
`Review/zhou2023_computer_vision_microfluidics.md` first-entry `Review/zhou2023_computer_vision_microfluidics.md` first-entry
file is unchanged from the 2026-08-17T18:09Z fetch (mtime file is unchanged from the 2026-08-17T18:09Z fetch (mtime
2026-08-11, **8-day carry-forward** in the untracked set at this 2026-08-11, **9-day carry-forward** in the untracked set at this
fetch; the structural signal continues to weaken per the fetch; the structural signal continues to weaken per the
Notable-entity entry on the `Review/` subfolder). Notable-entity entry on the `Review/` subfolder).
- **Ahead of origin/main:** 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17T18:09Z + 2026-08-18T18:10Z fetches — vault is silent in the 2026-08-18T18:10Z → 2026-08-19T18:08Z window). - **Ahead of origin/main:** 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z fetches — vault is silent in the 2026-08-19T18:08Z → 2026-08-20T18:09Z window).
- **Dirty:** yes — the untracked file set is **unchanged** from the - **Dirty:** yes — the untracked file set is **unchanged** from the
2026-08-17T18:09Z fetch (no new untracked files or directories 2026-08-17T18:09Z fetch (no new untracked files or directories
appeared in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour appeared in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour
window, and no new untracked files or directories appeared in the window, no new untracked files or directories appeared in the
2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window either). The 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window either, and
no new untracked files or directories appeared in the
2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window either). The
25+ untracked entries from the 2026-08-17T18:09Z fetch carry 25+ untracked entries from the 2026-08-17T18:09Z fetch carry
forward unchanged: 8 × `02-Clients/Agents/区域-2026-0807.md` forward unchanged: 8 × `02-Clients/Agents/区域-2026-0807.md`
distributor-rebuild files (per the 2026-08-07 Hermes hook 4 sweep) distributor-rebuild files (per the 2026-08-07 Hermes hook 4 sweep)
@@ -107,10 +112,10 @@ help locate things in the vault, not summarize their content.
directories from the 2026-08-17T18:09Z fetch (`celvivo_commercial/` directories from the 2026-08-17T18:09Z fetch (`celvivo_commercial/`
+ `templates/`). The **`Review/zhou2023_computer_vision_microfluidics.md` + `templates/`). The **`Review/zhou2023_computer_vision_microfluidics.md`
first entry in the new `Review/` subfolder** is still **untracked** first entry in the new `Review/` subfolder** is still **untracked**
(Robin has not yet committed it) — **8-day carry-forward** at this (Robin has not yet committed it) — **9-day carry-forward** at this
fetch; the structural signal continues to weaken per the fetch; the structural signal continues to weaken per the
Notable-entity entry on the `Review/` subfolder (the subfolder has Notable-entity entry on the `Review/` subfolder (the subfolder has
been a single-entry watchlist since 2026-08-13, now **6 fetches been a single-entry watchlist since 2026-08-13, now **7 fetches
silent**). silent**).
- **Working-tree status (raw manifest, abbreviated):** - **Working-tree status (raw manifest, abbreviated):**
@@ -321,34 +326,36 @@ indexed on [`/sources/literature.md`](/sources/literature.md). The
`1614ccf9`) are the 8-step SOP rewrite cycle (v3 → v11) Robin re-ran `1614ccf9`) are the 8-step SOP rewrite cycle (v3 → v11) Robin re-ran
on the same paper. on the same paper.
## openwiki-wiki — working-tree status (2026-08-19) ## openwiki-wiki — working-tree status (2026-08-20)
- **Branch:** `main` - **Branch:** `main`
- **HEAD:** `dcb53a2873d37b6396de682d658433c2ea85b376` (the - **HEAD:** `bd30339182707c42328c2920a7d744eb360df618` (the
`chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts `chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts
(sources-sync 2026-08-19)` commit — same auto-source-sync job that (sources-sync 2026-08-20)` commit — same auto-source-sync job that
carried the 2026-08-15 count-data wipe + re-applied the pattern on carried the 2026-08-15 count-data wipe + re-applied the pattern on
2026-08-16 + 2026-08-17 + 2026-08-18 + now 2026-08-19; see 2026-08-16 + 2026-08-17 + 2026-08-18 + 2026-08-19 + now 2026-08-20;
Notable-entity § "2026-08-15 sources-sync bug" for the operational see Notable-entity § "2026-08-15 sources-sync bug" for the
note). The 2026-08-19T18:08Z fetch observed wiki HEAD bumped from operational note). The 2026-08-20T18:09Z fetch observed wiki HEAD
`1fc73ae` (2026-08-18T18:10Z fetch) to `dcb53a2` — **2 new bumped from `dcb53a2` (2026-08-19T18:08Z fetch) to `bd30339`
automated wiki commits** in the 2026-08-18T18:10Z → **2 new automated wiki commits** in the 2026-08-19T18:08Z →
2026-08-19T18:08Z 24-hour window: (a) `7e904ec` chore: daily update 2026-08-20T18:09Z 24-hour window: (a) `a44f284` chore: daily update
2026-08-19 (2026-08-19 02:23 +0800); (b) `dcb53a2` chore(sources): 2026-08-20 (2026-08-20 02:23 +0800); (b) `bd30339` chore(sources):
refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync
2026-08-19, 2026-08-19 02:30 +0800). Both commits are routine 2026-08-20, 2026-08-20 02:30 +0800). Both commits are routine
auto-orchestration — the `7e904ec` daily update carried the auto-orchestration — the `a44f284` daily update carried the
synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + synthesis-layer edits from the prior HN-1 2026-08-20T18:00Z +
web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs; the web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z
`dcb53a2` sources-sync re-applied the count-data wipe pattern on runs; the `bd30339` sources-sync re-applied the count-data wipe
NocoDB / SeaFile / Wiki.js / RAGFlow for the **fifth** consecutive pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the **sixth**
time. consecutive time (after `997b648` 2026-08-16 + `be49285`
2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + now
`bd30339` 2026-08-20).
- **Working-tree state:** 10 modified files (uncommitted — pending - **Working-tree state:** 10 modified files (uncommitted — pending
next CLI orchestration), **unchanged from the 2026-08-18T18:10Z next CLI orchestration), **unchanged from the 2026-08-19T18:08Z
fetch** (the `7e904ec` 2026-08-19 daily update committed some fetch** (the `a44f284` 2026-08-20 daily update committed some
synthesis edits but the working tree still shows 10 uncommitted synthesis edits but the working tree still shows 10 uncommitted
files because the very next synthesis edits from this git-repo-1 files because the very next synthesis edits from this git-repo-1
2026-08-19T18:08Z run re-touch the same files). The 10 dirty files 2026-08-20T18:09Z run re-touch the same files). The 10 dirty files
are: are:
- `.last-update.json` — CLI metadata, will be updated when this run's - `.last-update.json` — CLI metadata, will be updated when this run's
`status: complete` lands. `status: complete` lands.
@@ -357,51 +364,57 @@ on the same paper.
+ git-repo-1 2026-08-13 runs, plus the "Latest update — + git-repo-1 2026-08-13 runs, plus the "Latest update —
git-repo-1 (2026-08-15T18:07Z)" + "Latest update — git-repo-1 git-repo-1 (2026-08-15T18:07Z)" + "Latest update — git-repo-1
(2026-08-17T18:09Z)" + "Latest update — git-repo-1 (2026-08-17T18:09Z)" + "Latest update — git-repo-1
(2026-08-18T18:10Z)" paragraphs added by the 2026-08-15 + (2026-08-18T18:10Z)" + "Latest update — git-repo-1
2026-08-17 + 2026-08-18 git-repo runs; this git-repo-1 (2026-08-19T18:08Z)" paragraphs added by the 2026-08-15 +
2026-08-19T18:08Z run adds the "Latest update — git-repo-1 2026-08-17 + 2026-08-18 + 2026-08-19 git-repo runs; this
(2026-08-19T18:08Z)" paragraph and updates the Backlog git-repo git-repo-1 2026-08-20T18:09Z run adds the "Latest update —
entry to reflect the new wiki HEAD `dcb53a2`. git-repo-1 (2026-08-20T18:09Z)" paragraph and updates the
Backlog git-repo entry to reflect the new wiki HEAD `bd30339`.
- `sources/README.md` — refreshed connector-roll table row for - `sources/README.md` — refreshed connector-roll table row for
web-search-1 (added the 2026-08-15 + 2026-08-17 + 2026-08-18 + web-search-1 (added the 2026-08-15 + 2026-08-17 + 2026-08-18 +
2026-08-19 skips to the 7-entry skip streak) + added frontmatter 2026-08-19 + 2026-08-20 skips to the 8-entry skip streak) +
placeholders to nocodb.md / ragflow.md / seafile.md / wikijs.md added frontmatter placeholders to nocodb.md / ragflow.md /
during the 2026-08-15 daily update. seafile.md / wikijs.md during the 2026-08-15 daily update.
- `sources/hackernews.md` — accumulated "Latest update — - `sources/hackernews.md` — accumulated "Latest update —
2026-08-15 18:00 UTC" + "Latest update — 2026-08-16 18:00 UTC" + 2026-08-15 18:00 UTC" + "Latest update — 2026-08-16 18:00 UTC" +
"Latest update — 2026-08-17 18:00 UTC" + "Latest update — "Latest update — 2026-08-17 18:00 UTC" + "Latest update —
2026-08-18 18:00 UTC" + "Latest update — 2026-08-19 18:00 UTC" 2026-08-18 18:00 UTC" + "Latest update — 2026-08-19 18:00 UTC"
sections from the prior HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 + "Latest update — 2026-08-20 18:00 UTC" sections from the
2026-08-17 + HN-1 2026-08-18 + HN-1 2026-08-19 runs (Auto-research prior HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 +
with codex 232x Faster Kernel + Anthropic multi-agent + HN-1 2026-08-18 + HN-1 2026-08-19 + HN-1 2026-08-20 runs
Stripe/OpenRouter + Copilot Autofix + Qwen 3.8 27B + Agent Mesh + (Auto-research with codex 232x Faster Kernel + Anthropic
machine0 YC S26 + Amazon order emails AI-agent data + multi-agent + Stripe/OpenRouter + Copilot Autofix + Qwen 3.8
OpenRouter-Stripe formal confirmation + OneCLI + Extensible 27B + Agent Mesh + machine0 YC S26 + Amazon order emails
Software + Frugal Tokens flag-for-traceability callouts + the AI-agent data + OpenRouter-Stripe formal confirmation + OneCLI
4th / 5th / 6th / 7th / 8th consecutive empty / noise-only + Extensible Software + Frugal Tokens + the Nature brain
Algolia lane streak notes) — landed in uncommitted state during organoid time-passage paper + Anthropic Claude Code AGENTS.md
the HN-1 runs. feature request + Unsloth Dynamic 3.0 GGUFs flag-for-
traceability callouts + the 4th / 5th / 6th / 7th / 8th /
9th consecutive empty / noise-only Algolia lane streak notes)
— landed in uncommitted state during the HN-1 runs.
- `sources/index.md` — re-appears as dirty in the working tree at - `sources/index.md` — re-appears as dirty in the working tree at
this fetch (was committed by `151d22b` 2026-08-16 daily update, this fetch (was committed by `151d22b` 2026-08-16 daily update,
then re-touched by subsequent HN-1 + git-repo-1 synthesis edits then re-touched by subsequent HN-1 + git-repo-1 synthesis edits
and re-appears as uncommitted). Status: accumulated and re-appears as uncommitted). Status: accumulated
synthesis-layer edits from the prior HN-1 2026-08-13 + HN-1 synthesis-layer edits from the prior HN-1 2026-08-13 + HN-1
2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18
+ HN-1 2026-08-19 + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + HN-1 2026-08-19 + HN-1 2026-08-20 + git-repo-1 2026-08-13 +
+ git-repo-1 2026-08-17 + git-repo-1 2026-08-18 + this git-repo-1 2026-08-15 + git-repo-1 2026-08-17 + git-repo-1
git-repo-1 2026-08-19 runs. 2026-08-18 + git-repo-1 2026-08-19 + this git-repo-1
2026-08-20 runs.
- `sources/nocodb.md``openwiki_generated: true` placeholder - `sources/nocodb.md``openwiki_generated: true` placeholder
frontmatter auto-applied during the 2026-08-15 daily update + frontmatter auto-applied during the 2026-08-15 daily update +
carried forward in 2026-08-16 + 2026-08-17 + 2026-08-18 + carried forward in 2026-08-16 + 2026-08-17 + 2026-08-18 +
2026-08-19 daily updates; **placeholder resolved by the 2026-08-19 + 2026-08-20 daily updates; **placeholder resolved
2026-08-18T18:10Z update run** (proper `type` / `title` / by the 2026-08-18T18:10Z update run** (proper `type` / `title` /
`description` / `tags` frontmatter now in place); **count data `description` / `tags` frontmatter now in place); **count data
wiped** by `2507925` 2026-08-15 sources-sync (NocoDB went from wiped** by `2507925` 2026-08-15 sources-sync (NocoDB went from
6614 → 0 records) and the wipe persists across the 4 subsequent 6614 → 0 records) and the wipe persists across the 5 subsequent
sources-syncs (`997b648` 2026-08-16 + `be49285` 2026-08-17 + sources-syncs (`997b648` 2026-08-16 + `be49285` 2026-08-17 +
`1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 — the count stays at `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339`
0 across all 5 sources-syncs); body content (13 literature tables 2026-08-20 — the count stays at 0 across all 6 sources-syncs);
+ record counts from `1737454` baseline) remains intact. body content (13 literature tables + record counts from
`1737454` baseline) remains intact.
- `sources/ragflow.md` — same `openwiki_generated: true` placeholder - `sources/ragflow.md` — same `openwiki_generated: true` placeholder
auto-applied during the 2026-08-15 daily update; auto-applied during the 2026-08-15 daily update;
**placeholder resolved by the 2026-08-18T18:10Z update run** **placeholder resolved by the 2026-08-18T18:10Z update run**
@@ -421,15 +434,18 @@ on the same paper.
- `sources/web-search.md` — accumulated "2026-08-15 attempted - `sources/web-search.md` — accumulated "2026-08-15 attempted
update — skipped" + "2026-08-17 attempted update — skipped" + update — skipped" + "2026-08-17 attempted update — skipped" +
"2026-08-18 attempted update — skipped" + "2026-08-19 attempted "2026-08-18 attempted update — skipped" + "2026-08-19 attempted
update — skipped" sections from the web-search-1 2026-08-15 + update — skipped" + "2026-08-20 attempted update — skipped"
web-search-1 2026-08-17 + web-search-1 2026-08-18 + web-search-1 sections from the web-search-1 2026-08-15 + web-search-1
2026-08-19 runs (5th + 6th + 7th + 8th consecutive skips on the 2026-08-17 + web-search-1 2026-08-18 + web-search-1 2026-08-19 +
same code path). web-search-1 2026-08-20 runs (5th + 6th + 7th + 8th + 9th
consecutive skips on the same code path).
- `sources/wikijs.md` — same `openwiki_generated: true` placeholder - `sources/wikijs.md` — same `openwiki_generated: true` placeholder
auto-applied during the 2026-08-15 daily update; **count data auto-applied during the 2026-08-15 daily update; **count data
wiped** by `2507925` 2026-08-15 sources-sync (Wiki.js went from wiped** by `2507925` 2026-08-15 sources-sync (Wiki.js went from
83 → 0 unique pages; ID range 22..1704 → 0..0) and the wipe 83 → 0 unique pages; ID range 22..1704 → 0..0) and the wipe
persists across the 4 subsequent sources-syncs. persists across the 5 subsequent sources-syncs (`997b648`
2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 +
`dcb53a2` 2026-08-19 + `bd30339` 2026-08-20).
- **Auth:** local path only — no remote, no credentials. - **Auth:** local path only — no remote, no credentials.
- **New file in this window:** `sources/openwiki-version-drift.md` - **New file in this window:** `sources/openwiki-version-drift.md`
was created in the 2026-08-17 daily update commit `5c70881` (auto- was created in the 2026-08-17 daily update commit `5c70881` (auto-
@@ -443,6 +459,8 @@ on the same paper.
| Date | Hash | Note | | Date | Hash | Note |
| --- | --- | --- | | --- | --- | --- |
| 2026-08-20 | `bd30339` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-20) — **count-data wipe re-applied** for the **sixth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` + 2026-08-19 `dcb53a2`); see Notable-entity § "2026-08-15 sources-sync bug" |
| 2026-08-20 | `a44f284` | chore: daily update 2026-08-20 (synthesis-layer edits accumulated from the prior HN-1 2026-08-20T18:00Z + web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z runs) |
| 2026-08-19 | `dcb53a2` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19) — **count-data wipe re-applied** for the **fifth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae`); see Notable-entity § "2026-08-15 sources-sync bug" | | 2026-08-19 | `dcb53a2` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19) — **count-data wipe re-applied** for the **fifth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae`); see Notable-entity § "2026-08-15 sources-sync bug" |
| 2026-08-19 | `7e904ec` | chore: daily update 2026-08-19 (synthesis-layer edits accumulated from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs + the prior `sources/openwiki-version-drift.md` carryover) | | 2026-08-19 | `7e904ec` | chore: daily update 2026-08-19 (synthesis-layer edits accumulated from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs + the prior `sources/openwiki-version-drift.md` carryover) |
| 2026-08-18 | `1fc73ae` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18) — **count-data wipe re-applied** for the **fourth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285`); see Notable-entity § "2026-08-15 sources-sync bug" | | 2026-08-18 | `1fc73ae` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18) — **count-data wipe re-applied** for the **fourth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285`); see Notable-entity § "2026-08-15 sources-sync bug" |
@@ -521,10 +539,11 @@ pipeline catches up.
| --- | --- | --- | | --- | --- | --- |
| 2026-08-15T18:07:49Z → 2026-08-17T18:09:32Z | HEAD `297f106d``a4fa5a32` (**7 new commits**: `0fc8db24` + `290e9635` + `24c713de` + `4073abf4` Quintard 2024 Nat Commun microfluidic vascularized organoid chip 4-commit LDR cycle + `2e6f5989` + `00f824f2` + `a4fa5a32` Guo 2026 Front Cell Dev Biol organoid ethics systematic review 3-commit LDR cycle — **first time since the 2026-07-28 / 2026-07-29 Parate / Lee / Hodge cluster that two new paper deep-reads landed on `main` in the same 48-hour window**) | HEAD `2507925``be49285` (**4 new commits**: `151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) | | 2026-08-15T18:07:49Z → 2026-08-17T18:09:32Z | HEAD `297f106d``a4fa5a32` (**7 new commits**: `0fc8db24` + `290e9635` + `24c713de` + `4073abf4` Quintard 2024 Nat Commun microfluidic vascularized organoid chip 4-commit LDR cycle + `2e6f5989` + `00f824f2` + `a4fa5a32` Guo 2026 Front Cell Dev Biol organoid ethics systematic review 3-commit LDR cycle — **first time since the 2026-07-28 / 2026-07-29 Parate / Lee / Hodge cluster that two new paper deep-reads landed on `main` in the same 48-hour window**) | HEAD `2507925``be49285` (**4 new commits**: `151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) |
| 2026-08-17T18:09:32Z → 2026-08-18T18:10:12Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity) | HEAD `be49285``1fc73ae` (**2 new automated commits**: `8127797` chore: daily update 2026-08-18 + `1fc73ae` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, the **fourth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern)) | | 2026-08-17T18:09:32Z → 2026-08-18T18:10:12Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity) | HEAD `be49285``1fc73ae` (**2 new automated commits**: `8127797` chore: daily update 2026-08-18 + `1fc73ae` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, the **fourth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern)) |
| 2026-08-19T18:08:24Z → 2026-08-20T18:09:15Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window for the **4th consecutive fetch**; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **4 calendar days stale**) | HEAD `dcb53a2``bd30339` (**2 new automated commits**: `a44f284` chore: daily update 2026-08-20 + `bd30339` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-20, the **sixth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + now `bd30339` 2026-08-20)) |
| 2026-08-18T18:10:12Z → 2026-08-19T18:08:24Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window for the **3rd consecutive fetch**; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **3 calendar days stale**) | HEAD `1fc73ae``dcb53a2` (**2 new automated commits**: `7e904ec` chore: daily update 2026-08-19 + `dcb53a2` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19, the **fifth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + now `dcb53a2` 2026-08-19)) | | 2026-08-18T18:10:12Z → 2026-08-19T18:08:24Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window for the **3rd consecutive fetch**; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, **3 calendar days stale**) | HEAD `1fc73ae``dcb53a2` (**2 new automated commits**: `7e904ec` chore: daily update 2026-08-19 + `dcb53a2` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-19, the **fifth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + now `dcb53a2` 2026-08-19)) |
| **Net new external evidence** | **2 new paper deep-reads** (from the 2026-08-15T18:07Z → 2026-08-17T18:09Z window): Quintard 2024 Nat Commun microfluidic vascularized organoid chip + Guo 2026 Front Cell Dev Biol organoid ethics systematic review. **2 new untracked directories** (from the same window): `celvivo_commercial/1331651_20260630_131201.pdf` (the 6-30 quote PDF migrated into a new folder) + `templates/类器官IRB申请清单.md` (the IRB application checklist derived from Guo 2026 — Robin's first customer-facing sales ammunition template produced from a single deep-read). The `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still untracked, carrying forward from the 2026-08-13 fetch (**8-day carry-forward** at the 2026-08-19T18:08Z fetch). **No new vault evidence in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window** | **1 new wiki file** (from the 2026-08-17 daily update `5c70881`): `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z). Synthesis-layer edits accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18 + HN-1 2026-08-19 + web-search-1 2026-08-15 + web-search-1 2026-08-17 + web-search-1 2026-08-18 + web-search-1 2026-08-19 + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + git-repo-1 2026-08-17 + git-repo-1 2026-08-18 + this git-repo-1 2026-08-19 runs are pending the next CLI commit cycle | | **Net new external evidence** | **2 new paper deep-reads** (from the 2026-08-15T18:07Z → 2026-08-17T18:09Z window): Quintard 2024 Nat Commun microfluidic vascularized organoid chip + Guo 2026 Front Cell Dev Biol organoid ethics systematic review. **2 new untracked directories** (from the same window): `celvivo_commercial/1331651_20260630_131201.pdf` (the 6-30 quote PDF migrated into a new folder) + `templates/类器官IRB申请清单.md` (the IRB application checklist derived from Guo 2026 — Robin's first customer-facing sales ammunition template produced from a single deep-read). The `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still untracked, carrying forward from the 2026-08-13 fetch (**9-day carry-forward** at the 2026-08-20T18:09Z fetch — was 8-day at the 2026-08-19T18:08Z fetch). **No new vault evidence in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window** | **1 new wiki file** (from the 2026-08-17 daily update `5c70881`): `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z). **Wiki-side**: the 2026-08-20T18:09Z fetch observed wiki HEAD bump `dcb53a2``bd30339` — 2 new automated wiki commits (`a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20 — the **sixth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern). Synthesis-layer edits accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18 + HN-1 2026-08-19 + HN-1 2026-08-20 + web-search-1 2026-08-15 + web-search-1 2026-08-17 + web-search-1 2026-08-18 + web-search-1 2026-08-19 + web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + git-repo-1 2026-08-17 + git-repo-1 2026-08-18 + git-repo-1 2026-08-19 + this git-repo-1 2026-08-20 runs are pending the next CLI commit cycle |
| Untracked → committed migrations | **Quintard 2024 file (4 commits)** + **Guo 2026 file (3 commits)** all moved from absent → committed on `main` (in the 2026-08-15T18:07Z → 2026-08-17T18:09Z window); **the 2 new untracked directories** are net-new in the same window. **None** in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window (vault silent) or the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window (vault silent for the 3rd consecutive fetch) | **2026-08-15T18:07Z → 2026-08-17T18:09Z window**: the `sources/index.md` from the 2026-08-15 dirty set was committed by the 2026-08-16 daily update `151d22b`; the remaining 9 dirty files are uncommitted synthesis edits accumulated across the prior HN-1 + web-search-1 + git-repo-1 runs. **2026-08-17T18:09Z → 2026-08-18T18:10Z window**: the `8127797` 2026-08-18 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-18T18:00Z + git-repo-1 2026-08-17T18:09Z runs (touching `commitments.md` + `index.md` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,literature,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/{01-organoid-equipment,05-robin-research}.md` per `git show --stat 8127797`); the 9 dirty files re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files. **2026-08-18T18:10Z → 2026-08-19T18:08Z window**: the `7e904ec` 2026-08-19 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs (touching `.last-update.json` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/05-robin-research.md` per `git show --stat 7e904ec`); the 10 dirty files (`.last-update.json` + `quickstart.md` + `sources/{README,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md`) re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-19T18:08Z run re-touch the same files. The 10 dirty files are awaiting the next CLI commit cycle | | Untracked → committed migrations | **Quintard 2024 file (4 commits)** + **Guo 2026 file (3 commits)** all moved from absent → committed on `main` (in the 2026-08-15T18:07Z → 2026-08-17T18:09Z window); **the 2 new untracked directories** are net-new in the same window. **None** in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window (vault silent) or the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window (vault silent for the 3rd consecutive fetch) or the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window (vault silent for the 4th consecutive fetch). | **2026-08-15T18:07Z → 2026-08-17T18:09Z window**: the `sources/index.md` from the 2026-08-15 dirty set was committed by the 2026-08-16 daily update `151d22b`; the remaining 9 dirty files are uncommitted synthesis edits accumulated across the prior HN-1 + web-search-1 + git-repo-1 runs. **2026-08-17T18:09Z → 2026-08-18T18:10Z window**: the `8127797` 2026-08-18 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-18T18:00Z + git-repo-1 2026-08-17T18:09Z runs (touching `commitments.md` + `index.md` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,literature,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/{01-organoid-equipment,05-robin-research}.md` per `git show --stat 8127797`); the 9 dirty files re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files. **2026-08-18T18:10Z → 2026-08-19T18:08Z window**: the `7e904ec` 2026-08-19 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-19T18:00Z + web-search-1 2026-08-19 + git-repo-1 2026-08-18T18:10Z runs (touching `.last-update.json` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/05-robin-research.md` per `git show --stat 7e904ec`); the 10 dirty files (`.last-update.json` + `quickstart.md` + `sources/{README,hackernews,index,nocodb,ragflow,seafile,web-search,wikijs}.md`) re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-19T18:08Z run re-touch the same files. **2026-08-19T18:08Z → 2026-08-20T18:09Z window**: the `a44f284` 2026-08-20 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-20T18:00Z + web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z runs; the 10 dirty files re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-20T18:09Z run re-touch the same files. The 10 dirty files are awaiting the next CLI commit cycle |
| **Operational issue carried over from prior runs** | n/a | **`2507925` 2026-08-15 sources-sync bug** + the 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` + 2026-08-19 `dcb53a2` sources-syncs (which re-applied the same operational pattern as `2507925` — NocoDB / Wiki.js / RAGFlow count values stayed zero across all **5** sources-syncs). The on-disk `~/.openwiki/connectors/web-search/config.json` is unaffected — this is a wiki-side CRON issue with the auto-source-sync job, not a connector config issue. Recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page. The data is recoverable from `git show 8ddc6d9:sources/nocodb.md` etc. for any future recovery commit | | **Operational issue carried over from prior runs** | n/a | **`2507925` 2026-08-15 sources-sync bug** + the 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` + 2026-08-19 `dcb53a2` + 2026-08-20 `bd30339` sources-syncs (which re-applied the same operational pattern as `2507925` — NocoDB / Wiki.js / RAGFlow count values stayed zero across all **6** sources-syncs). The on-disk `~/.openwiki/connectors/web-search/config.json` is unaffected — this is a wiki-side CRON issue with the auto-source-sync job, not a connector config issue. Recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page. The data is recoverable from `git show 8ddc6d9:sources/nocodb.md` etc. for any future recovery commit |
## Vault navigation index ## Vault navigation index
@@ -577,8 +596,8 @@ Markdown file counts per deep-read subfolder:
| `Microbioreactor/` | 1 (new as of 2026-08-07 — Rosero 2026 Front Bioeng Biotechnol) | | `Microbioreactor/` | 1 (new as of 2026-08-07 — Rosero 2026 Front Bioeng Biotechnol) |
| `Cells/` | 1 (new as of 2026-08-08 — Fernandez Vallone 2026 Cells THSDC) | | `Cells/` | 1 (new as of 2026-08-08 — Fernandez Vallone 2026 Cells THSDC) |
| `Review/` | 1 (new as of 2026-08-13 — Zhou 2023 computer vision + microfluidics, **untracked**, **8-day carry-forward** at 2026-08-19 fetch, **6 fetches silent** — structural signal continuing to weaken) | | `Review/` | 1 (new as of 2026-08-13 — Zhou 2023 computer vision + microfluidics, **untracked**, **8-day carry-forward** at 2026-08-19 fetch, **6 fetches silent** — structural signal continuing to weaken) |
| `templates/` | 1 (new as of 2026-08-17 — `类器官IRB申请清单.md`, derived from the Guo 2026 ethics deep-read; Robin's first customer-facing template produced from a single deep-read, **untracked**, **3-day carry-forward** at 2026-08-19 fetch) | | `templates/` | 1 (new as of 2026-08-17 — `类器官IRB申请清单.md`, derived from the Guo 2026 ethics deep-read; Robin's first customer-facing template produced from a single deep-read, **untracked**, **4-day carry-forward** at 2026-08-20 fetch (was 3-day at 2026-08-19) |
| `celvivo_commercial/` | 1 (new as of 2026-08-17 — `1331651_20260630_131201.pdf`, the 6-30 quote PDF migrated into a new folder, **untracked**, **3-day carry-forward** at 2026-08-19 fetch) | | `celvivo_commercial/` | 1 (new as of 2026-08-17 — `1331651_20260630_131201.pdf`, the 6-30 quote PDF migrated into a new folder, **untracked**, **4-day carry-forward** at 2026-08-20 fetch (was 3-day at 2026-08-19) |
Total ≈ 1,207 deep-read notes on `main` (+2 from the 2026-08-16 Quintard 2024 + Guo 2026 clusters). Total ≈ 1,207 deep-read notes on `main` (+2 from the 2026-08-16 Quintard 2024 + Guo 2026 clusters).
Review/ zhou2023 computer vision + microfluidics, **untracked** — only Review/ zhou2023 computer vision + microfluidics, **untracked** — only
@@ -646,9 +665,9 @@ fields still 待补).
- **Quintard 2024 Nat Commun microfluidic vascularized organoid chip (2026-08-16, 7 commits in 48-hour window)**`obsidian-vault/Literature/Deep-Reads/Organoid/quintard_2024_vasorganoid_chip.md` (189 lines; 4-commit LDR cycle `0fc8db24` adds → `290e9635` -v2 修图床/双 H1/落款 → `24c713de` -v3 Wiki.js 自带图床 6 张图 → `4073abf4` -v4 转发语标题/落款加粗/删 3Brain; Wiki IDs 1719/1720/1722, NocoDB Id 3297). The paper is **the first microfluidic / organ-on-chip platform paper** Robin has deep-read in the 2026-08 window; the platform combines (i) 10-channel parallel microfluidic chips with U-shaped capture sites (300-800 µm adjustable), (ii) fibrin + Matrigel hydrogel layer deposition using Landau-Levich-Bretherton effect, (iii) ~10 s capture efficiency ~100%, (iv) dynamic perfusion 7-30 days with HUVEC + fibroblast co-culture + hiPSC-derived BVO + islet spheroid + lung organoid cross-validation, (v) hierarchical vasculature (37 µm upstream artery-vein + 8 µm BVO capillaries, matching physiological ranges 50-1900 s⁻¹). **Net-new external evidence** in this run (git-repo-1 2026-08-17). The 4-star "与我们的产品" table lists **Mimetas OrganoPlate ⭐⭐⭐⭐** (direct Phaseguide-based vascularized / kidney / intestine organ-on-chip competitor) + **CelVivo ClinoStar ⭐⭐⭐** (upstream workflow step: BVO differentiation day 0-15 needs rotating-wall suspension culture; ClinoStar is the canonical hardware for this stage; the paper's day 15 → chip-on-board handoff is the canonical CelVivo → organ-on-chip workflow) + **Emulate Organ-Chip ⭐⭐⭐** (Colon-Intestine-Liver platform companion). Synthesis routes into `/themes/05-robin-research.md` (新增 by-vendor entry) and `/sources/literature.md` (last-30-days deep-read table). Vendor-anchor mapping: CelVivo-adjacent (workflow upstream) + Mimetas OrganoPlate / Emulate Organ-Chip (organ-on-chip product lane that Robin's portfolio does not currently cover but represents a potential cross-sell if Robin's customers ask "where do I run my CelVivo-matured organoids in a vascularized microenvironment?"). Customer-entry: 药企临床前 (vascularized drug screening) + 微流控 organ-on-chip 平台集成商 (Mimetas / Emulate channel partners) + academic PI (vascular development / diabetes). **Track on next fetch** whether Robin publishes a `/sources/literature-quintard-2024-nat-commun-vasorganoid-chip-deepread.md` synthesis page; the deep-read pipeline currently only carries `liang-2026-celvivo-clinostar-positioning` + `miao-2025-celvivo-clinostar-positioning` + `liu-2026-hd-mea-roadmap-implication` + `sharma-2026-retinal-organoid-mea-cross-sell` — no Quintard synthesis page yet. - **Quintard 2024 Nat Commun microfluidic vascularized organoid chip (2026-08-16, 7 commits in 48-hour window)**`obsidian-vault/Literature/Deep-Reads/Organoid/quintard_2024_vasorganoid_chip.md` (189 lines; 4-commit LDR cycle `0fc8db24` adds → `290e9635` -v2 修图床/双 H1/落款 → `24c713de` -v3 Wiki.js 自带图床 6 张图 → `4073abf4` -v4 转发语标题/落款加粗/删 3Brain; Wiki IDs 1719/1720/1722, NocoDB Id 3297). The paper is **the first microfluidic / organ-on-chip platform paper** Robin has deep-read in the 2026-08 window; the platform combines (i) 10-channel parallel microfluidic chips with U-shaped capture sites (300-800 µm adjustable), (ii) fibrin + Matrigel hydrogel layer deposition using Landau-Levich-Bretherton effect, (iii) ~10 s capture efficiency ~100%, (iv) dynamic perfusion 7-30 days with HUVEC + fibroblast co-culture + hiPSC-derived BVO + islet spheroid + lung organoid cross-validation, (v) hierarchical vasculature (37 µm upstream artery-vein + 8 µm BVO capillaries, matching physiological ranges 50-1900 s⁻¹). **Net-new external evidence** in this run (git-repo-1 2026-08-17). The 4-star "与我们的产品" table lists **Mimetas OrganoPlate ⭐⭐⭐⭐** (direct Phaseguide-based vascularized / kidney / intestine organ-on-chip competitor) + **CelVivo ClinoStar ⭐⭐⭐** (upstream workflow step: BVO differentiation day 0-15 needs rotating-wall suspension culture; ClinoStar is the canonical hardware for this stage; the paper's day 15 → chip-on-board handoff is the canonical CelVivo → organ-on-chip workflow) + **Emulate Organ-Chip ⭐⭐⭐** (Colon-Intestine-Liver platform companion). Synthesis routes into `/themes/05-robin-research.md` (新增 by-vendor entry) and `/sources/literature.md` (last-30-days deep-read table). Vendor-anchor mapping: CelVivo-adjacent (workflow upstream) + Mimetas OrganoPlate / Emulate Organ-Chip (organ-on-chip product lane that Robin's portfolio does not currently cover but represents a potential cross-sell if Robin's customers ask "where do I run my CelVivo-matured organoids in a vascularized microenvironment?"). Customer-entry: 药企临床前 (vascularized drug screening) + 微流控 organ-on-chip 平台集成商 (Mimetas / Emulate channel partners) + academic PI (vascular development / diabetes). **Track on next fetch** whether Robin publishes a `/sources/literature-quintard-2024-nat-commun-vasorganoid-chip-deepread.md` synthesis page; the deep-read pipeline currently only carries `liang-2026-celvivo-clinostar-positioning` + `miao-2025-celvivo-clinostar-positioning` + `liu-2026-hd-mea-roadmap-implication` + `sharma-2026-retinal-organoid-mea-cross-sell` — no Quintard synthesis page yet.
- **Guo 2026 Front Cell Dev Biol organoid ethics systematic review (2026-08-16, 7 commits in 48-hour window)**`obsidian-vault/Literature/Deep-Reads/Organoid/guo_2026_organoid_ethical_review.md` (170 lines + 3 真图; 3-commit LDR cycle `2e6f5989` adds → `00f824f2` -v2 修图床 (加 2 张 Wiki.js 自带图) → `a4fa5a32` -v3 补 Fig 1; Wiki ID 1724, NocoDB Id 3298). The paper is **the first organoid-research ethics / IRB systematic review** Robin has deep-read in any window — fills the methodological gap on the IRB-side that the prior clinical-translation evidence (CDE classification + Order No. 818) does not directly cover. The paper structures the IRB review framework as **7 mandatory points** (sample provenance + donor informed consent + data privacy & de-identification + co-culture agency + animal welfare 3R + cross-border regulation + long-term storage & termination); the cross-border table compares China (《人类遗传资源管理条例》+ 《涉及人的生命科学和医学研究伦理审查办法》2023), US (HIPAA + Common Rule + NIH GDS), EU (GDPR + Clinical Trials Regulation 536/2014), Japan, Korea. The 4-star "与我们的产品" table lists **CelVivo ClinoStar ⭐⭐⭐⭐** (clinical-translation IRB compliance — the 7 mandatory points directly apply to ClinoStar customer IRB submissions; **Robin 推广 ClinoStar 给三甲医院时, 可附带本框架作为增值**) + **Mimetas OrganoPlate ⭐⭐⭐⭐** (co-culture ethics — Mimetas 主营类器官 + 免疫细胞共培养, the co-culture agency framework from Guo 2026 point 4 directly applies) + **Emulate Organ-Chip ⭐⭐⭐** (organoid + microfluidic cross-border regulation reference). **Net-new external evidence** in this run (git-repo-1 2026-08-17). Robin translated the paper into a **customer-facing sales ammunition template** at `templates/类器官IRB申请清单.md` (180 lines; 7 mandatory points checklist + 5 customer Q&A + China vs International flow table + 10 attachments + 7 citations; v1.0 dated 2026-08-16, "Robin 8-16 实战沉淀") — see the templates/ entry in the next bullet. Customer-entry: 临床转化型医院 (class A tertiary hospitals running organoid IRB submissions) + 类器官厂家 Robin 培训客户 (the IRB checklist is the canonical "Robin 培训客户 IRB 申请" core material) + academic PI (cross-border collaboration IRB paperwork). **Track on next fetch** whether (a) the templates/ IRB checklist gets committed, (b) the Robin-author attribution in the template is recognized as a wiki-side customer-training artifact, (c) Robin produces a deep-read synthesis page at `/sources/literature-guo-2026-front-cell-dev-biol-organoid-ethics-deepread.md`, and (d) the IRB checklist routes into the existing CelVivo industrial-customers program (which currently lives at `05-Documents/Products/Celvivo/Industrial-Customers/`) as a standard customer-training artifact. - **Guo 2026 Front Cell Dev Biol organoid ethics systematic review (2026-08-16, 7 commits in 48-hour window)**`obsidian-vault/Literature/Deep-Reads/Organoid/guo_2026_organoid_ethical_review.md` (170 lines + 3 真图; 3-commit LDR cycle `2e6f5989` adds → `00f824f2` -v2 修图床 (加 2 张 Wiki.js 自带图) → `a4fa5a32` -v3 补 Fig 1; Wiki ID 1724, NocoDB Id 3298). The paper is **the first organoid-research ethics / IRB systematic review** Robin has deep-read in any window — fills the methodological gap on the IRB-side that the prior clinical-translation evidence (CDE classification + Order No. 818) does not directly cover. The paper structures the IRB review framework as **7 mandatory points** (sample provenance + donor informed consent + data privacy & de-identification + co-culture agency + animal welfare 3R + cross-border regulation + long-term storage & termination); the cross-border table compares China (《人类遗传资源管理条例》+ 《涉及人的生命科学和医学研究伦理审查办法》2023), US (HIPAA + Common Rule + NIH GDS), EU (GDPR + Clinical Trials Regulation 536/2014), Japan, Korea. The 4-star "与我们的产品" table lists **CelVivo ClinoStar ⭐⭐⭐⭐** (clinical-translation IRB compliance — the 7 mandatory points directly apply to ClinoStar customer IRB submissions; **Robin 推广 ClinoStar 给三甲医院时, 可附带本框架作为增值**) + **Mimetas OrganoPlate ⭐⭐⭐⭐** (co-culture ethics — Mimetas 主营类器官 + 免疫细胞共培养, the co-culture agency framework from Guo 2026 point 4 directly applies) + **Emulate Organ-Chip ⭐⭐⭐** (organoid + microfluidic cross-border regulation reference). **Net-new external evidence** in this run (git-repo-1 2026-08-17). Robin translated the paper into a **customer-facing sales ammunition template** at `templates/类器官IRB申请清单.md` (180 lines; 7 mandatory points checklist + 5 customer Q&A + China vs International flow table + 10 attachments + 7 citations; v1.0 dated 2026-08-16, "Robin 8-16 实战沉淀") — see the templates/ entry in the next bullet. Customer-entry: 临床转化型医院 (class A tertiary hospitals running organoid IRB submissions) + 类器官厂家 Robin 培训客户 (the IRB checklist is the canonical "Robin 培训客户 IRB 申请" core material) + academic PI (cross-border collaboration IRB paperwork). **Track on next fetch** whether (a) the templates/ IRB checklist gets committed, (b) the Robin-author attribution in the template is recognized as a wiki-side customer-training artifact, (c) Robin produces a deep-read synthesis page at `/sources/literature-guo-2026-front-cell-dev-biol-organoid-ethics-deepread.md`, and (d) the IRB checklist routes into the existing CelVivo industrial-customers program (which currently lives at `05-Documents/Products/Celvivo/Industrial-Customers/`) as a standard customer-training artifact.
- **Review/ subfolder — first entry (2026-08-13, still uncommitted at 2026-08-19, 8-day carry-forward, watchlist signal continuing to weaken)**`obsidian-vault/04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` is the **first file in a new `Review/` subfolder** under `04-Literature/Deep-Reads/`. The file is **untracked** at the 2026-08-19 fetch (Robin has not yet committed it — same state as the 2026-08-13 + 2026-08-15 + 2026-08-17 + 2026-08-18 fetches, **0 progress in the 2026-08-13 → 2026-08-19 144-hour window**, **6 consecutive fetches silent on the file**). **Watchlist signal continuing to weaken at this fetch**: per the 2026-08-15 watchlist-trigger rubric ("if the file remains uncommitted at the next fetch (2026-08-17 or later), the structural signal weakens"), the `Review/` subfolder at the 2026-08-19 fetch is **still single-entry, still untracked** — the structural signal **continues to weaken** at this fetch (**8-day carry-forward** with no commit, no follow-up paper landed in the subfolder across **6 consecutive fetches**). The `Review/` subfolder is more likely to be a one-off than a recurring pattern. The file should either be committed on a future fetch (which would re-strengthen the signal) or remain untracked indefinitely (which would confirm the one-off interpretation). No synthesis routes until the file is committed. - **Review/ subfolder — first entry (2026-08-13, still uncommitted at 2026-08-20, 9-day carry-forward, watchlist signal continuing to weaken)**`obsidian-vault/04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` is the **first file in a new `Review/` subfolder** under `04-Literature/Deep-Reads/`. The file is **untracked** at the 2026-08-20 fetch (Robin has not yet committed it — same state as the 2026-08-13 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 fetches, **0 progress in the 2026-08-13 → 2026-08-20 168-hour window**, **7 consecutive fetches silent on the file**). **Watchlist signal continuing to weaken at this fetch**: per the 2026-08-15 watchlist-trigger rubric ("if the file remains uncommitted at the next fetch (2026-08-17 or later), the structural signal weakens"), the `Review/` subfolder at the 2026-08-20 fetch is **still single-entry, still untracked** — the structural signal **continues to weaken** at this fetch (**9-day carry-forward** with no commit, no follow-up paper landed in the subfolder across **7 consecutive fetches**). The `Review/` subfolder is more likely to be a one-off than a recurring pattern. The file should either be committed on a future fetch (which would re-strengthen the signal) or remain untracked indefinitely (which would confirm the one-off interpretation). No synthesis routes until the file is committed.
- **`templates/` subfolder — first entry (2026-08-16, NEW this run)** — `templates/类器官IRB申请清单.md` (180 lines, mtime 2026-08-16, untracked) is the **first file in a new `templates/` directory** at the vault root. The file is Robin's **first customer-facing sales ammunition template produced from a single deep-read** (the Guo 2026 IRB ethics systematic review). Content: 7 mandatory IRB review points checklist (样本来源/知情同意/数据隐私/共培养主体性/3R 动物福利/跨境监管/长期保存与终止使用) + 5 customer Q&A ("类器官研究要不要 IRB 申请?" / "类器官共培养产品怎么申请 IRB?" / "类器官跨境研究怎么报?" / "3R 原则怎么写?" / "类器官 + 免疫细胞共培养 = CAR-T 体外培养, 算不算新生物体? 伦理上算什么?") + China vs International flow comparison table + 10-row 申请附件清单 + 7 references (Guo 2026 + ISSCR 2021 + OHRP 2016 + GDPR 2018 + China 2023 + China 2019 + Cambridge 2020). The template's `version: v1.0 (2026-08-16, Robin 8-16 实战沉淀)` and `Robin 业务定位: 类器官厂家给三甲医院 IRB 申请的标准模板 + Robin 客户培训材料核心` framing makes it explicit that this is the canonical "Robin 培训客户 IRB 申请" core material. **Structural significance**: the `templates/` directory is new — none of the existing top-level folders (`01-Active-Sales/` / `02-Clients/` / `02-Active-Deals/` / `02-Contacts/` / `03-Product/` / `03-Resources/` / `04-Literature/` / `05-Documents/` / `06-Sales/` / `99-Templates/` / `memory/`) provides a vendor-agnostic customer-training-artifact slot at the vault root. The Obsidian vault already has `99-Templates/` for reusable Obsidian templates (note templates, daily-report templates — per `99-Templates/` size hint 14 .md), but the new `templates/` directory is **for customer-facing sales ammunition**, not Obsidian note templates — a different artifact type. The naming convention overlaps with `99-Templates/` and may need disambiguation; Robin's intent (per the file header) is for this `templates/` to be the **canonical customer-training artifact directory**, distinct from `99-Templates/` Obsidian-note templates. **Customer-entry scenarios** called out in the template: (a) 类器官厂家研发负责人 = IRB 申请准备, (b) Robin 客户开发 = 培训客户 IRB 申请核心材料, (c) 医院 IRB 委员会 = 类器官研究 IRB 审查标准参考, (d) 学术合作方 = 跨境合作时多国法规差异对照. **Carry-forward status** (2026-08-19): untracked, **3-day carry-forward** since first observation (2026-08-17 fetch), future-commit candidate. **Track on next fetch** whether (a) Robin commits the file to `main`, (b) more templates land in the directory (extending the customer-training-artifact slot), (c) the `templates/` and `99-Templates/` naming overlap gets resolved (rename / docs / conventions). Synthesis routes into `/themes/05-robin-research.md` (sales ammunition pipeline section). - **`templates/` subfolder — first entry (2026-08-16, NEW this run)** — `templates/类器官IRB申请清单.md` (180 lines, mtime 2026-08-16, untracked) is the **first file in a new `templates/` directory** at the vault root. The file is Robin's **first customer-facing sales ammunition template produced from a single deep-read** (the Guo 2026 IRB ethics systematic review). Content: 7 mandatory IRB review points checklist (样本来源/知情同意/数据隐私/共培养主体性/3R 动物福利/跨境监管/长期保存与终止使用) + 5 customer Q&A ("类器官研究要不要 IRB 申请?" / "类器官共培养产品怎么申请 IRB?" / "类器官跨境研究怎么报?" / "3R 原则怎么写?" / "类器官 + 免疫细胞共培养 = CAR-T 体外培养, 算不算新生物体? 伦理上算什么?") + China vs International flow comparison table + 10-row 申请附件清单 + 7 references (Guo 2026 + ISSCR 2021 + OHRP 2016 + GDPR 2018 + China 2023 + China 2019 + Cambridge 2020). The template's `version: v1.0 (2026-08-16, Robin 8-16 实战沉淀)` and `Robin 业务定位: 类器官厂家给三甲医院 IRB 申请的标准模板 + Robin 客户培训材料核心` framing makes it explicit that this is the canonical "Robin 培训客户 IRB 申请" core material. **Structural significance**: the `templates/` directory is new — none of the existing top-level folders (`01-Active-Sales/` / `02-Clients/` / `02-Active-Deals/` / `02-Contacts/` / `03-Product/` / `03-Resources/` / `04-Literature/` / `05-Documents/` / `06-Sales/` / `99-Templates/` / `memory/`) provides a vendor-agnostic customer-training-artifact slot at the vault root. The Obsidian vault already has `99-Templates/` for reusable Obsidian templates (note templates, daily-report templates — per `99-Templates/` size hint 14 .md), but the new `templates/` directory is **for customer-facing sales ammunition**, not Obsidian note templates — a different artifact type. The naming convention overlaps with `99-Templates/` and may need disambiguation; Robin's intent (per the file header) is for this `templates/` to be the **canonical customer-training artifact directory**, distinct from `99-Templates/` Obsidian-note templates. **Customer-entry scenarios** called out in the template: (a) 类器官厂家研发负责人 = IRB 申请准备, (b) Robin 客户开发 = 培训客户 IRB 申请核心材料, (c) 医院 IRB 委员会 = 类器官研究 IRB 审查标准参考, (d) 学术合作方 = 跨境合作时多国法规差异对照. **Carry-forward status** (2026-08-20): untracked, **4-day carry-forward** since first observation (2026-08-17 fetch — was 3-day at the 2026-08-19 fetch), future-commit candidate. **Track on next fetch** whether (a) Robin commits the file to `main`, (b) more templates land in the directory (extending the customer-training-artifact slot), (c) the `templates/` and `99-Templates/` naming overlap gets resolved (rename / docs / conventions). Synthesis routes into `/themes/05-robin-research.md` (sales ammunition pipeline section).
- **`celvivo_commercial/` subfolder — first entry (2026-08-17, NEW this run)** — `celvivo_commercial/1331651_20260630_131201.pdf` (56 KB PDF, mtime 2026-08-17, untracked) is the **first file in a new `celvivo_commercial/` directory** at the vault root. The PDF is the existing 6-30 quote PDF that Robin migrated into a new folder. The file is **a quote PDF**, not a synthesis target — the on-disk evidence is the existing 6-30 quote document that already exists in `05-Documents/Products/Celvivo/Industrial-Customers/` (per the 2026-08-15 synthesis-policy section above, "commercial docs (8 files: Exhibit 1 Price Book / Exhibit 3 SuperUser certification / Huibai demo discount agreement / 惠百 PO 盖章版 / Celvivo Distribution Agreement 2026 Huibai Bio / 1331651_20260630_131201 (6-30 quote) / Packing Slip Ordre 726_1 / Packing Slip Ordre 726_2)"). **Structural significance**: the `celvivo_commercial/` directory is new — Robin has migrated the 6-30 quote out of wherever it was previously (presumably a working folder or `05-Documents/Products/Celvivo/` deep path) into a top-level dedicated directory. **The migration is unfinished** — only 1 file in the new directory; if Robin intends the directory to consolidate all 8 commercial docs from `05-Documents/Products/Celvivo/Industrial-Customers/`, the other 7 files (Exhibit 1 Price Book / Exhibit 3 SuperUser certification / Huibai demo discount agreement / 惠百 PO 盖章版 / Celvivo Distribution Agreement 2026 / Packing Slip Ordre 726_1 / Packing Slip Ordre 726_2) should eventually land here too. **No synthesis routes** until Robin commits the file or migrates more docs into the directory. Carry-forward status (2026-08-19): untracked, single-entry, **3-day carry-forward** since first observation (2026-08-17 fetch), future-commit candidate. Track on next fetch whether (a) the file gets committed, (b) more commercial docs migrate into the directory. - **`celvivo_commercial/` subfolder — first entry (2026-08-17, NEW this run)** — `celvivo_commercial/1331651_20260630_131201.pdf` (56 KB PDF, mtime 2026-08-17, untracked) is the **first file in a new `celvivo_commercial/` directory** at the vault root. The PDF is the existing 6-30 quote PDF that Robin migrated into a new folder. The file is **a quote PDF**, not a synthesis target — the on-disk evidence is the existing 6-30 quote document that already exists in `05-Documents/Products/Celvivo/Industrial-Customers/` (per the 2026-08-15 synthesis-policy section above, "commercial docs (8 files: Exhibit 1 Price Book / Exhibit 3 SuperUser certification / Huibai demo discount agreement / 惠百 PO 盖章版 / Celvivo Distribution Agreement 2026 Huibai Bio / 1331651_20260630_131201 (6-30 quote) / Packing Slip Ordre 726_1 / Packing Slip Ordre 726_2)"). **Structural significance**: the `celvivo_commercial/` directory is new — Robin has migrated the 6-30 quote out of wherever it was previously (presumably a working folder or `05-Documents/Products/Celvivo/` deep path) into a top-level dedicated directory. **The migration is unfinished** — only 1 file in the new directory; if Robin intends the directory to consolidate all 8 commercial docs from `05-Documents/Products/Celvivo/Industrial-Customers/`, the other 7 files (Exhibit 1 Price Book / Exhibit 3 SuperUser certification / Huibai demo discount agreement / 惠百 PO 盖章版 / Celvivo Distribution Agreement 2026 / Packing Slip Ordre 726_1 / Packing Slip Ordre 726_2) should eventually land here too. **No synthesis routes** until Robin commits the file or migrates more docs into the directory. Carry-forward status (2026-08-20): untracked, single-entry, **4-day carry-forward** since first observation (2026-08-17 fetch — was 3-day at the 2026-08-19 fetch), future-commit candidate. Track on next fetch whether (a) the file gets committed, (b) more commercial docs migrate into the directory.
- **2026-08-15 sources-sync bug — count-data wipe (operational)** — the `2507925e27b83b4f9d2e6f3b9c939d081a90f9f2` `chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-15)` commit at 2026-08-15 +0800 02:31 committed **empty count values** for NocoDB / Wiki.js / RAGFlow (SeaFile was already empty so the commit was a no-op there): (a) NocoDB: 6614 → **0** total records, with all 13 per-table counts (brain_organoid_literature / intestinal_organoid_literature / Celvivo_literature / cardiac_organoid_literature / cancer_organoid_literature / liver_organoid_literature / other_organoid_literature / kidney_organoid_literature / retinal_organoid_literature / Cellink_literature / organoid_literature_old / lung_organoid_literature / 3Brain_literature) cleared to empty cells; (b) SeaFile: libraries table unchanged (was empty in `1737454` already — a separate, older cron issue not introduced by `2507925`); (c) Wiki.js: 83 → **0** unique pages, ID range 22..1704 → **0..0**, Locale 分布 → empty, Top-level 路径分布 → empty; (d) RAGFlow: landing 200 → **000**, `/api/v1/health` 404 → **000**, `/api/v1/datasets` 401 → **000**. The header lines on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page still report `上次同步: 2026-08-14T18:30:42Z` (the prior successful sync timestamp), but the body count values are wiped. **Probable root cause**: the auto-source-sync CRON job ran but the underlying NocoDB / Wiki.js / RAGFlow API calls failed (likely the same operational issue already documented on `/sources/web-search.md` and `/sources/README.md` — runtime registry disagreement on `enabled: true` vs. disabled); the script committed the empty values instead of skipping the commit on failure. **Impact**: 3 source pages now show misleading zero/null values (NocoDB / Wiki.js / RAGFlow); Tavily / HN / git-repo synthesis is unaffected. **Recovery**: the wiped data is recoverable from the prior wiki commit (`git show 1737454:sources/nocodb.md` etc. will restore the pre-wipe state). This run restored the wiped data on all 3 affected pages (plus an operational note documenting the bug) so the wiki is internally consistent again. **Wiki-synthesis concern**: **none** — the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters. **Operational concern**: **yes** — the auto-source-sync job should (a) check connectivity before committing, (b) skip the commit on API failure rather than committing empty values, or (c) preserve the prior counter values when a fresh pull returns null/empty. Recorded for traceability here + on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page. - **2026-08-15 sources-sync bug — count-data wipe (operational)** — the `2507925e27b83b4f9d2e6f3b9c939d081a90f9f2` `chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-15)` commit at 2026-08-15 +0800 02:31 committed **empty count values** for NocoDB / Wiki.js / RAGFlow (SeaFile was already empty so the commit was a no-op there): (a) NocoDB: 6614 → **0** total records, with all 13 per-table counts (brain_organoid_literature / intestinal_organoid_literature / Celvivo_literature / cardiac_organoid_literature / cancer_organoid_literature / liver_organoid_literature / other_organoid_literature / kidney_organoid_literature / retinal_organoid_literature / Cellink_literature / organoid_literature_old / lung_organoid_literature / 3Brain_literature) cleared to empty cells; (b) SeaFile: libraries table unchanged (was empty in `1737454` already — a separate, older cron issue not introduced by `2507925`); (c) Wiki.js: 83 → **0** unique pages, ID range 22..1704 → **0..0**, Locale 分布 → empty, Top-level 路径分布 → empty; (d) RAGFlow: landing 200 → **000**, `/api/v1/health` 404 → **000**, `/api/v1/datasets` 401 → **000**. The header lines on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page still report `上次同步: 2026-08-14T18:30:42Z` (the prior successful sync timestamp), but the body count values are wiped. **Probable root cause**: the auto-source-sync CRON job ran but the underlying NocoDB / Wiki.js / RAGFlow API calls failed (likely the same operational issue already documented on `/sources/web-search.md` and `/sources/README.md` — runtime registry disagreement on `enabled: true` vs. disabled); the script committed the empty values instead of skipping the commit on failure. **Impact**: 3 source pages now show misleading zero/null values (NocoDB / Wiki.js / RAGFlow); Tavily / HN / git-repo synthesis is unaffected. **Recovery**: the wiped data is recoverable from the prior wiki commit (`git show 1737454:sources/nocodb.md` etc. will restore the pre-wipe state). This run restored the wiped data on all 3 affected pages (plus an operational note documenting the bug) so the wiki is internally consistent again. **Wiki-synthesis concern**: **none** — the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters. **Operational concern**: **yes** — the auto-source-sync job should (a) check connectivity before committing, (b) skip the commit on API failure rather than committing empty values, or (c) preserve the prior counter values when a fresh pull returns null/empty. Recorded for traceability here + on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page.
- **Liang 2026 liver organoid fibrosis platform (2026-08-12)**`04-Literature/Deep-Reads/Liver/2026-08-12_Liang_2026_SciRep_liver_organoid_fibrosis_platform.md` (170 lines; `[[MOC-类器官与3D培养]]` already names this paper via `related:` back-link). The paper is **the net-new external evidence** this run (git-repo-1 2026-08-12) brought into the vault; see synthesis at `/themes/01-organoid-equipment.md` § CelVivo evidence (added 2026-08-12) and `/commitments.md` `liang-2026-celvivo-clinostar-positioning`. Single-paper LDR cycle: 4 commits (`e542c977``8699a154``aacba7aa``297f106d`) walked Robin's standard 3-stage SOP on the same file (186 lines → 105+/122- page 946 rewrite → page 934 修齐 micro-revisions). The 4-star "与我们的产品" table on the paper lists **CelVivo ClinoStar ⭐⭐⭐⭐** (P1-P10 长程扩增对应旋转培养 30+ 天无剪切; HSC 静止态在模拟微重力下 7+ 天维持) + **CelVivo ClinoReactor ⭐⭐⭐⭐** (单组织 3 轨道分通道灌流; TGFβ 时间程序精确切换) — **parallel CelVivo ClinoStar rating 5 to Miao 2025 v2's ClinoStar rating 5** from the 2026-08-08 flywheel-sync, but for liver organoid (long-term maturation + fibrosis modeling) rather than lung organoid (vascularization). 7 SeaFile Fig (Fig1-7) + 4-paper 参考文献 (Huch 2013 / Huch 2015 / Clevers 2016). Customer-entry: 药企临床前 (抗纤维化药筛) + 临床肝活检中心 (1-2 mg → 3 周药敏) + 学术 PI (2D vs 3D 旋转 efficiency). **MOC linkage**: the paper's `related:` field already names `[[MOC-类器官与3D培养]]` (the first MOC, created 2026-08-10) — confirming the MOC pattern is in active use on real deep-reads. - **Liang 2026 liver organoid fibrosis platform (2026-08-12)**`04-Literature/Deep-Reads/Liver/2026-08-12_Liang_2026_SciRep_liver_organoid_fibrosis_platform.md` (170 lines; `[[MOC-类器官与3D培养]]` already names this paper via `related:` back-link). The paper is **the net-new external evidence** this run (git-repo-1 2026-08-12) brought into the vault; see synthesis at `/themes/01-organoid-equipment.md` § CelVivo evidence (added 2026-08-12) and `/commitments.md` `liang-2026-celvivo-clinostar-positioning`. Single-paper LDR cycle: 4 commits (`e542c977``8699a154``aacba7aa``297f106d`) walked Robin's standard 3-stage SOP on the same file (186 lines → 105+/122- page 946 rewrite → page 934 修齐 micro-revisions). The 4-star "与我们的产品" table on the paper lists **CelVivo ClinoStar ⭐⭐⭐⭐** (P1-P10 长程扩增对应旋转培养 30+ 天无剪切; HSC 静止态在模拟微重力下 7+ 天维持) + **CelVivo ClinoReactor ⭐⭐⭐⭐** (单组织 3 轨道分通道灌流; TGFβ 时间程序精确切换) — **parallel CelVivo ClinoStar rating 5 to Miao 2025 v2's ClinoStar rating 5** from the 2026-08-08 flywheel-sync, but for liver organoid (long-term maturation + fibrosis modeling) rather than lung organoid (vascularization). 7 SeaFile Fig (Fig1-7) + 4-paper 参考文献 (Huch 2013 / Huch 2015 / Clevers 2016). Customer-entry: 药企临床前 (抗纤维化药筛) + 临床肝活检中心 (1-2 mg → 3 周药敏) + 学术 PI (2D vs 3D 旋转 efficiency). **MOC linkage**: the paper's `related:` field already names `[[MOC-类器官与3D培养]]` (the first MOC, created 2026-08-10) — confirming the MOC pattern is in active use on real deep-reads.
- **CelVivo industrial customers program** — a dedicated subfolder under - **CelVivo industrial customers program** — a dedicated subfolder under
@@ -731,7 +750,84 @@ fields still 待补).
## Synthesis policy for this source ## Synthesis policy for this source
- **This run (2026-08-19, git-repo-1 18:08Z):** **0 new vault commits** - **This run (2026-08-20, git-repo-1 18:09Z):** **0 new vault commits**
in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window — the
vault HEAD is **unchanged at `a4fa5a32`** for the **4th consecutive
fetch** (the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle
+ Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most
recent vault activity, **4 calendar days stale** at this fetch).
**0 new vault mtime changes** — the 2 untracked directories
(`celvivo_commercial/` + `templates/`) and the 23+ untracked files
from the 2026-08-17T18:09Z fetch carry forward unchanged. The
`Review/zhou2023_computer_vision_microfluidics.md` first-entry in the
new `Review/` subfolder is **9-day carry-forward** at this fetch
(uncommitted since 2026-08-11); the structural signal for `Review/`
continues to weaken per the Notable-entity entry (the subfolder has
been a single-entry watchlist since 2026-08-13, now **7 fetches
silent**). Wiki-side: **2 new automated wiki commits** landed in
the 24-hour window — `a44f284` chore: daily update 2026-08-20
(2026-08-20 02:23 +0800) + `bd30339` chore(sources): refresh
NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-20,
2026-08-20 02:30 +0800) — advancing wiki HEAD from `dcb53a2`
(2026-08-19T18:08Z fetch) to `bd30339`. Both commits are routine
auto-orchestration: (a) the `a44f284` daily update carried the
synthesis-layer edits from the prior HN-1 2026-08-20T18:00Z +
web-search-1 2026-08-20 (skipped) + git-repo-1 2026-08-19T18:08Z
runs; (b) the `bd30339` sources-sync re-applied the count-data wipe
pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the **sixth**
consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16
`997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` +
2026-08-19 `dcb53a2`).
**No new external evidence** in this run (vault silent), **no
new theme row**, **no new commitment row**, **no new open-question
row**, **no new personal-logistics item** — the synthesis layer
is unchanged. Wiki edits this run: (a) `/sources/git-repo.md` (this
page) — refreshed frontmatter HEAD pointers (vault HEAD unchanged at
`a4fa5a32`, wiki HEAD `dcb53a2``bd30339`, tags + `2026-08-20`,
timestamp → `2026-08-20T18:09:15Z`), refreshed the Connector /
State section to the new `2026-08-20T18-09-15-122Z` raw manifest,
refreshed the obsidian-vault working-tree-status section to
2026-08-20 (0 new commits, 0 new mtime changes, untracked set
unchanged; `Review/` 8-day → 9-day + `templates/` + `celvivo_commercial/`
3-day → 4-day carry-forward), refreshed the openwiki-wiki
working-tree-status section to 2026-08-20 (2 new automated wiki
commits + the carry-forward 10 uncommitted synthesis-layer edits),
added 2 new entries at the top of the Recent-commits-for-wiki
table (`bd30339` sources-sync 2026-08-20 + `a44f284` daily update
2026-08-20), refreshed the Summary-of-last-48-hours table to add
the 2026-08-19T18:08Z → 2026-08-20T18:09Z window data (0 vault
commits / 2 wiki commits / operational row noting the **sixth**
consecutive sources-sync re-applying the count-data wipe pattern),
refreshed the Notable-entity `Review/` entry (8-day → 9-day carry-
forward, **6 fetches silent****7 fetches silent**) + bumped
`templates/` + `celvivo_commercial/` 3-day → 4-day, refreshed
the Synthesis-policy section with this run's delta summary;
(b) `/themes/05-robin-research.md` — vault-snapshot metadata
refreshed (fetch timestamp → `2026-08-20T18:09:15Z`, raw-manifest path
→ the new `2026-08-20T18-09-15-122Z` manifest); the vault HEAD
pointer stays `a4fa5a32` (unchanged across the 2026-08-17 +
2026-08-18 + 2026-08-19 + 2026-08-20 fetches); `Review/`
8-day → 9-day carry-forward; `Templates/` + `CelVivo-commercial/`
3-day → 4-day; (c) `/quickstart.md` — added the "Latest update
— git-repo-1 (2026-08-20T18:09Z)" paragraph; updated the Backlog
git-repo entry to reflect the new wiki HEAD `bd30339` + 2 new
automated wiki commits + the carry-forward 10 uncommitted files +
the **sixth** consecutive sources-sync note; (d) `/sources/README.md`
— refreshed Active connectors Git repo row + Connector roll Git
repo row to mention the 2026-08-20 18:09 UTC fetch + the **sixth**
consecutive sources-sync. **No `/themes.md` row change, no
`/commitments.md` row, no `/open-questions.md` row, no
`/personal-logistics.md` item** — the vault delta is empty and the
wiki delta is automated maintenance only. The "vault is silent on
a 24-hour window" pattern continues to be normal cadence for Robin's
workflow (the 2026-08-13 + 2026-08-15 + 2026-08-18 + 2026-08-19
fetches were also 0-new-vault-commits daily-cycle follow-ups; the
2026-08-20 fetch makes it **5 consecutive 0-new-vault-commit
fetches**). The synthesis layer (themes / commitments /
open-questions / personal-logistics) is independent of the wiki-side
automated maintenance commits.
- **Previous run (2026-08-19, git-repo-1 18:08Z):** **0 new vault commits**
in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window — the in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window — the
vault HEAD is **unchanged at `a4fa5a32`** for the **3rd consecutive vault HEAD is **unchanged at `a4fa5a32`** for the **3rd consecutive
fetch** (the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle fetch** (the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle
@@ -796,7 +892,7 @@ fields still 待补).
a 24-hour window" pattern continues to be normal cadence for Robin's a 24-hour window" pattern continues to be normal cadence for Robin's
workflow (the 2026-08-13 + 2026-08-15 + 2026-08-18 fetches were workflow (the 2026-08-13 + 2026-08-15 + 2026-08-18 fetches were
also 0-new-vault-commits daily-cycle follow-ups; the 2026-08-19 also 0-new-vault-commits daily-cycle follow-ups; the 2026-08-19
fetch makes it **4 consecutive 0-new-vault-commit fetches**). fetch made it **4 consecutive 0-new-vault-commit fetches**).
The synthesis layer (themes / commitments / open-questions / The synthesis layer (themes / commitments / open-questions /
personal-logistics) is independent of the wiki-side automated personal-logistics) is independent of the wiki-side automated
maintenance commits. maintenance commits.
+39 -4
View File
File diff suppressed because one or more lines are too long
+1 -1
View File
@@ -4,7 +4,7 @@
- [Agents 代理商档案索引 — 跨 agent CRM 同步](agents.md) - Cross-agent index of the Obsidian vault 02-Clients/Agents/* profiles (which agents Robin is actively working with, mapped by vendor product line). Base identity only — sensitive fields (phone / WeChat / email / end-customer list / opportunity value) live only in the private vault. Updated 2026-08-07 with _known_associations.md product-line → agent → end-customer mapping. - [Agents 代理商档案索引 — 跨 agent CRM 同步](agents.md) - Cross-agent index of the Obsidian vault 02-Clients/Agents/* profiles (which agents Robin is actively working with, mapped by vendor product line). Base identity only — sensitive fields (phone / WeChat / email / end-customer list / opportunity value) live only in the private vault. Updated 2026-08-07 with _known_associations.md product-line → agent → end-customer mapping.
- [全国经销商地图 (2026-08-07 时点)](distributors-china-2026.md) - Compact index of Robin's 2026-08-07 China distributor baseline (259 dealers across 7 regions, replacing 261 in the 2026-07-24 baseline) plus the new product-association index _known_associations.md. Surfaces CelVivo ClinoStar → 济南成全 + FemtoBiomed CellShot → 9X Bio → TriArm Therapeutics chain. Routes pricing-sensitive fields to the private Obsidian vault per /sources/agents.md privacy rule. - [全国经销商地图 (2026-08-07 时点)](distributors-china-2026.md) - Compact index of Robin's 2026-08-07 China distributor baseline (259 dealers across 7 regions, replacing 261 in the 2026-07-24 baseline) plus the new product-association index _known_associations.md. Surfaces CelVivo ClinoStar → 济南成全 + FemtoBiomed CellShot → 9X Bio → TriArm Therapeutics chain. Routes pricing-sensitive fields to the private Obsidian vault per /sources/agents.md privacy rule.
- [飞书邮箱 (Robin customer mailbox)](feishu-mail.md) - Planned cross-agent mailbox sync target for Robin's Feishu (飞书) mailbox (imap.feishu.cn:993 / imap.larksuite.com:993) — would let MiniMax code / Hermes recall 'what did Robin last discuss with customer X' from email metadata + summaries. Not yet provisioned — IMAP credentials + update script + crontab still pending Robin setup; this page documents the planned configuration and the sync policy that will be applied once provisioned. - [飞书邮箱 (Robin customer mailbox)](feishu-mail.md) - Planned cross-agent mailbox sync target for Robin's Feishu (飞书) mailbox (imap.feishu.cn:993 / imap.larksuite.com:993) — would let MiniMax code / Hermes recall 'what did Robin last discuss with customer X' from email metadata + summaries. Not yet provisioned — IMAP credentials + update script + crontab still pending Robin setup; this page documents the planned configuration and the sync policy that will be applied once provisioned.
- [Git repo — evidence index (Obsidian vault, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, **0 new vault commits in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window — vault is silent for the 3rd consecutive fetch**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD dcb53a2, 2026-08-19, **2 new automated wiki commits in the 2026-08-18T18:10Z → 2026-08-19T18:08Z window: `7e904ec` daily update 2026-08-19 + `dcb53a2` sources-sync 2026-08-19 — the fifth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here. - [Git repo — evidence index (Obsidian vault, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, **0 new vault commits in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window — vault is silent for the 4th consecutive fetch after the 2026-08-16 Quintard + Guo cluster**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD bd30339, 2026-08-20, **2 new automated wiki commits in the 2026-08-19T18:08Z → 2026-08-20T18:09Z window: `a44f284` daily update 2026-08-20 + `bd30339` sources-sync 2026-08-20 — the sixth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here.
- [Hacker News — evidence index](hackernews.md) - Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items. - [Hacker News — evidence index](hackernews.md) - Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items.
- [文献精读 Master Template (Robin 7-27 实战版, "真适合浏览" 1 文件)](ldr-report-template.md) - Master template for Robin's literature-deep-read (LDR) pipeline — consolidates 4 literature skills (`literature-deep-read` / `research` / `review` / `curation-for-sales`) into a single 8-rule + 3-trigger + 5-section "真适合浏览" report format. Synthesized from 4-27 SOP范本 + 7-27 实战 lessons (Tasevska / Raji / Bosnjakovic). Triggers "精读吧" / "发 wikijs" / "入库" / "A" / Id/DOI/PMID/PDF signals into 4-step精简 or 8-step完整 flows. PDF全文必传 + PyMuPDF xref去重 + 9项强制 + SeaFile hostname `fb.biokingdom.top` + NocoDB v1 JSON + 3张真图 + `journal-year-topic` 报告路径. - [文献精读 Master Template (Robin 7-27 实战版, "真适合浏览" 1 文件)](ldr-report-template.md) - Master template for Robin's literature-deep-read (LDR) pipeline — consolidates 4 literature skills (`literature-deep-read` / `research` / `review` / `curation-for-sales`) into a single 8-rule + 3-trigger + 5-section "真适合浏览" report format. Synthesized from 4-27 SOP范本 + 7-27 实战 lessons (Tasevska / Raji / Bosnjakovic). Triggers "精读吧" / "发 wikijs" / "入库" / "A" / Id/DOI/PMID/PDF signals into 4-step精简 or 8-step完整 flows. PDF全文必传 + PyMuPDF xref去重 + 9项强制 + SeaFile hostname `fb.biokingdom.top` + NocoDB v1 JSON + 3张真图 + `journal-year-topic` 报告路径.
- [Bosnjakovic 2025 PAH 3D 球体代谢组学: 跟 CelVivo ClinoStar dynamic culture 关系 (Bosnjakovic 2025 bioRxiv)](literature-cel-bosnjakovic-2025-pah-deepread.md) - Deep-read synthesis of Bosnjakovic A et al. 2025 bioRxiv preprint (DOI 10.1101/2025.07.10.663939v1, 2025-07-10) — 21-day mature HepG2 3D spheroids with graded non-cytotoxic BaP + BBF (PAH代表物) exposure for metabolomics biomarker discovery. Robin's connection: 3D spheroid protocol maps directly onto CelVivo ClinoStar dynamic culture; supports PAH exposure metabolomics positioning for hepatotoxicity / NAFLD modeling applications. 精读 2026-07-27. - [Bosnjakovic 2025 PAH 3D 球体代谢组学: 跟 CelVivo ClinoStar dynamic culture 关系 (Bosnjakovic 2025 bioRxiv)](literature-cel-bosnjakovic-2025-pah-deepread.md) - Deep-read synthesis of Bosnjakovic A et al. 2025 bioRxiv preprint (DOI 10.1101/2025.07.10.663939v1, 2025-07-10) — 21-day mature HepG2 3D spheroids with graded non-cytotoxic BaP + BBF (PAH代表物) exposure for metabolomics biomarker discovery. Robin's connection: 3D spheroid protocol maps directly onto CelVivo ClinoStar dynamic culture; supports PAH exposure metabolomics positioning for hepatotoxicity / NAFLD modeling applications. 精读 2026-07-27.
+6
View File
@@ -1,3 +1,9 @@
---
type: "Reference"
title: "NocoDB 文献库索引 — 跨 agent 数据层"
openwiki_generated: true
---
# NocoDB 文献库索引 — 跨 agent 数据层 # NocoDB 文献库索引 — 跨 agent 数据层
> 数据源: NocoDB 13 个文献库 + 2 个公司库 (实时,每次 OpenWiki cron 跑时更新) > 数据源: NocoDB 13 个文献库 + 2 个公司库 (实时,每次 OpenWiki cron 跑时更新)
+6
View File
@@ -1,3 +1,9 @@
---
type: "Reference"
title: "RAGFlow 全文检索索引 (Robin KB system)"
openwiki_generated: true
---
# RAGFlow 全文检索索引 (Robin KB system) # RAGFlow 全文检索索引 (Robin KB system)
> 数据源: RAGFlow (http://10.10.10.254:9980/) 14 个 KB 全文检索结果 > 数据源: RAGFlow (http://10.10.10.254:9980/) 14 个 KB 全文检索结果
+6
View File
@@ -1,3 +1,9 @@
---
type: "Reference"
title: "SeaFile 大文件存储索引"
openwiki_generated: true
---
# SeaFile 大文件存储索引 # SeaFile 大文件存储索引
> 数据源: SeaFile (http://10.10.10.254:9898/) 共 N 个资料库 > 数据源: SeaFile (http://10.10.10.254:9898/) 共 N 个资料库
+18 -6
View File
@@ -2,12 +2,20 @@
type: "Reference" type: "Reference"
title: "Web Search Evidence" title: "Web Search Evidence"
description: "Compact, source-backed evidence and ingestion coverage for the web-search-1 Tavily lane tracking CelVivo, 3Brain, Cellink, and related organoid news." description: "Compact, source-backed evidence and ingestion coverage for the web-search-1 Tavily lane tracking CelVivo, 3Brain, Cellink, and related organoid news."
tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-12, 2026-08-15, 2026-08-16, 2026-08-17, 2026-08-18, 2026-08-19] tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-12, 2026-08-15, 2026-08-16, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20]
--- ---
# Web Search Evidence # Web Search Evidence
> Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on any of these seven runs. > Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on any of these eight runs.
## 2026-08-20 attempted update — skipped
- **Status:** skipped. `web-search-1` is not enabled; the connector reports that `enabled=true` must be set in `~/.openwiki/connectors/web-search/config.json`.
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-19T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 runs hit the same blocker; this is the **eighth consecutive skip on the same code path**. To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-19 attempted update — skipped ## 2026-08-19 attempted update — skipped
@@ -15,7 +23,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-18T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-18T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 runs hit the same blocker; this is the **seventh consecutive skip on the same code path**. To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state. - **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 runs hit the same blocker; the 2026-08-20 run hit the same blocker too. This was the **seventh consecutive skip on the same code path at the time of the 2026-08-19 attempt** (and the eighth skip including the 2026-08-20 follow-up). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-18 attempted update — skipped ## 2026-08-18 attempted update — skipped
@@ -23,7 +31,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-17T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-17T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 runs hit the same blocker; the 2026-08-19 run hit the same blocker too. This was the **sixth consecutive skip on the same code path at the time of the 2026-08-18 attempt** (and the seventh skip including the 2026-08-19 follow-up). - **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 runs hit the same blocker; the 2026-08-19 and 2026-08-20 runs hit the same blocker too. This was the **sixth consecutive skip on the same code path at the time of the 2026-08-18 attempt** (and the eighth skip including the 2026-08-19 and 2026-08-20 follow-ups).
## 2026-08-17 attempted update — skipped ## 2026-08-17 attempted update — skipped
@@ -31,7 +39,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-16T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-16T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 runs hit the same blocker; the 2026-08-18 and 2026-08-19 runs hit the same blocker too. This was the **fifth consecutive skip on the same code path at the time of the 2026-08-17 attempt** (and the seventh skip including the 2026-08-18 and 2026-08-19 follow-ups). - **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 runs hit the same blocker; the 2026-08-18, 2026-08-19, and 2026-08-20 runs hit the same blocker too. This was the **fifth consecutive skip on the same code path at the time of the 2026-08-17 attempt** (and the eighth skip including the 2026-08-18, 2026-08-19, and 2026-08-20 follow-ups).
## 2026-08-15 attempted update — skipped ## 2026-08-15 attempted update — skipped
@@ -39,7 +47,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, and 2026-08-12 runs hit the same blocker; the 2026-08-17, 2026-08-18, and 2026-08-19 runs hit the same blocker too. This was the fourth consecutive skip on the same code path at the time of the 2026-08-15 attempt (and the seventh skip including the 2026-08-17, 2026-08-18, and 2026-08-19 follow-ups). - **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, and 2026-08-12 runs hit the same blocker; the 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 runs hit the same blocker too. This was the fourth consecutive skip on the same code path at the time of the 2026-08-15 attempt (and the eighth skip including the 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 follow-ups).
## 2026-08-12 attempted update — skipped ## 2026-08-12 attempted update — skipped
@@ -604,3 +612,7 @@ ion commitment. No new commitment; existing commitment Notes are extended.
- **Operational note for the connector:** Tavily is back online after a 3-day outage streak. The pull 8 / pull 9 / pull 10 advice to check `TAVILY_API_KEY`, Tavily status, and rate-limit posture no longer applies — the lane is functional again. No connector-side configuration change is required. - **Operational note for the connector:** Tavily is back online after a 3-day outage streak. The pull 8 / pull 9 / pull 10 advice to check `TAVILY_API_KEY`, Tavily status, and rate-limit posture no longer applies — the lane is functional again. No connector-side configuration change is required.
- **Coverage:** fetched `2026-08-03T18:08:50.866Z`; 10 queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`. - **Coverage:** fetched `2026-08-03T18:08:50.866Z`; 10 queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`.
queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`. queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`.
.
h-1`.
penwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`.
h-1`.
+6
View File
@@ -1,3 +1,9 @@
---
type: "Reference"
title: "Wiki.js 索引 — 跨 agent 文档发布层"
openwiki_generated: true
---
# Wiki.js 索引 — 跨 agent 文档发布层 # Wiki.js 索引 — 跨 agent 文档发布层
> 数据源: Wiki.js (http://10.10.10.254:3000/graphql) Biokingdom 实例 > 数据源: Wiki.js (http://10.10.10.254:3000/graphql) Biokingdom 实例
+1 -1
View File
File diff suppressed because one or more lines are too long
+10 -10
View File
@@ -2,8 +2,8 @@
type: "Reference" type: "Reference"
title: "Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)" title: "Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)"
description: "Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting)." description: "Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting)."
tags: [theme, research, vault, deep-read, sales, crm, life-sciences, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13] tags: [theme, research, vault, deep-read, sales, crm, life-sciences, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13]
timestamp: 2026-08-19T18:08:24Z timestamp: 2026-08-20T18:09:15Z
--- ---
# Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM) # Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)
@@ -51,19 +51,19 @@ The diagram shows Robin's research substrate: a single Obsidian vault with 8 buc
## Knowledge substrate: Obsidian vault ## Knowledge substrate: Obsidian vault
Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-19T18:08:24Z): Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-20T18:09:15Z):
| Field | Value | | Field | Value |
| --- | --- | | --- | --- |
| Repo path | `/home/ldw/workspace` | | Repo path | `/home/ldw/workspace` |
| Branch | `main` | | Branch | `main` |
| HEAD | `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (**unchanged** at the 2026-08-19T18:08Z fetch — **0 new vault commits** in the 2026-08-18T18:10Z → 2026-08-19T18:08Z 24-hour window; vault is silent for the **3rd consecutive fetch** after the 2026-08-17T18:09Z + 2026-08-18T18:10Z silent windows; **3 calendar days stale** since the last vault HEAD bump on 2026-08-16; the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most recent vault activity) | | HEAD | `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (**unchanged** at the 2026-08-20T18:09Z fetch — **0 new vault commits** in the 2026-08-19T18:08Z → 2026-08-20T18:09Z 24-hour window; vault is silent for the **4th consecutive fetch** after the 2026-08-17T18:09Z + 2026-08-18T18:10Z + 2026-08-19T18:08Z silent windows; **4 calendar days stale** since the last vault HEAD bump on 2026-08-16; the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most recent vault activity) |
| Ahead of origin/main | 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17 + 2026-08-18 + 2026-08-19 fetches) | | Ahead of origin/main | 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17 + 2026-08-18 + 2026-08-19 fetches) |
| Auth | local path only — no remote, no credentials | | Auth | local path only — no remote, no credentials |
| Working-tree state | dirty (23 untracked files + 2 new untracked directories — `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` — both untracked; the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still-uncommitted, carrying forward from the 2026-08-13 fetch, **8-day carry-forward** at the 2026-08-19T18:08Z fetch — **6 fetches silent** on the file) | | Working-tree state | dirty (23 untracked files + 2 new untracked directories — `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` — both untracked; the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still-uncommitted, carrying forward from the 2026-08-13 fetch, **9-day carry-forward** at the 2026-08-20T18:09Z fetch — **7 fetches silent** on the file) |
| Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-19T18-08-24-164Z/manifest.json` | | Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-20T18-09-15-122Z/manifest.json` |
| **Latest cluster (2026-08-16, replacing the 2026-08-12 Liang 2026 cluster)** | **Quintard 2024 Nat Commun + Guo 2026 Front Cell Dev Biol 7-commit LDR cluster** (`0fc8db24` Quintard adds file 189 lines → `290e9635` -v2 → `24c713de` -v3 → `4073abf4` -v4 → `2e6f5989` Guo adds file 170 lines → `00f824f2` -v2 → `a4fa5a32` -v3) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3-轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型) | | **Latest cluster (2026-08-16, replacing the 2026-08-12 Liang 2026 cluster)** | **Quintard 2024 Nat Commun + Guo 2026 Front Cell Dev Biol 7-commit LDR cluster** (`0fc8db24` Quintard adds file 189 lines → `290e9635` -v2 → `24c713de` -v3 → `4073abf4` -v4 → `2e6f5989` Guo adds file 170 lines → `00f824f2` -v2 → `a4fa5a32` -v3) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3-轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型) |
| **Latest uncommitted artifact (2026-08-13 → 2026-08-19, multi-file, unchanged at the 2026-08-19T18:08Z fetch)** | `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` (carry-forward untracked from 2026-08-13, now at **8-day carry-forward** at the 2026-08-19 fetch — file mtime `2026-08-11 16:31:54 +0800` so mtime-based carry-forward is 8 days; first-observation-date-based carry-forward is 6 days; **structural signal continuing to weaken** per `/sources/git-repo.md` Notable-entity entry — 6 consecutive fetches silent on the file; subfolder is more likely a one-off than a recurring pattern) + **2 new untracked directories added at the 2026-08-17 fetch**, still-uncommitted at the 2026-08-19 fetch (**3-day carry-forward** each): `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder) + `templates/类器官IRB申请清单.md` (180-line IRB application checklist derived from Guo 2026; Robin's first customer-facing template produced from a single deep-read — see the new Templates subtree below) | | **Latest uncommitted artifact (2026-08-13 → 2026-08-20, multi-file, unchanged at the 2026-08-20T18:09Z fetch)** | `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` (carry-forward untracked from 2026-08-13, now at **9-day carry-forward** at the 2026-08-20 fetch — file mtime `2026-08-11 16:31:54 +0800` so mtime-based carry-forward is 9 days; first-observation-date-based carry-forward is 7 days; **structural signal continuing to weaken** per `/sources/git-repo.md` Notable-entity entry — 7 consecutive fetches silent on the file; subfolder is more likely a one-off than a recurring pattern) + **2 new untracked directories added at the 2026-08-17 fetch**, still-uncommitted at the 2026-08-20 fetch (**4-day carry-forward** each — was 3-day at the 2026-08-19 fetch): `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder) + `templates/类器官IRB申请清单.md` (180-line IRB application checklist derived from Guo 2026; Robin's first customer-facing template produced from a single deep-read — see the new Templates subtree below) |
### Vault navigation index (top-level folders) ### Vault navigation index (top-level folders)
@@ -110,9 +110,9 @@ Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08
| `Retinal/` | 1 | retinal organoid | | `Retinal/` | 1 | retinal organoid |
| `Microbioreactor/` | 1 | Rosero 2026 Front Bioeng Biotechnol (added 2026-08-07) | | `Microbioreactor/` | 1 | Rosero 2026 Front Bioeng Biotechnol (added 2026-08-07) |
| `Cells/` | 1 | Fernandez Vallone 2026 Cells THSDC (added 2026-08-08) | | `Cells/` | 1 | Fernandez Vallone 2026 Cells THSDC (added 2026-08-08) |
| `Review/` | 1 | Zhou 2023 computer vision + microfluidics (added 2026-08-13, **untracked**, **8-day carry-forward** at 2026-08-19 fetch — **6 fetches silent** — structural signal continuing to weaken) | | `Review/` | 1 | Zhou 2023 computer vision + microfluidics (added 2026-08-13, **untracked**, **9-day carry-forward** at 2026-08-20 fetch (was 8-day at 2026-08-19)**7 fetches silent** — structural signal continuing to weaken) |
| `Templates/` | 1 | `类器官IRB申请清单.md` v1.0 (2026-08-16, derived from Guo 2026 ethics deep-read, **untracked**; first customer-facing template produced from a single deep-read; **3-day carry-forward** at 2026-08-19 fetch) | | `Templates/` | 1 | `类器官IRB申请清单.md` v1.0 (2026-08-16, derived from Guo 2026 ethics deep-read, **untracked**; first customer-facing template produced from a single deep-read; **4-day carry-forward** at 2026-08-20 fetch — was 3-day at 2026-08-19) |
| `CelVivo-commercial/` | 1 | `1331651_20260630_131201.pdf` (2026-06-30 quote PDF migrated into new folder 2026-08-17, **untracked**; **3-day carry-forward** at 2026-08-19 fetch) | | `CelVivo-commercial/` | 1 | `1331651_20260630_131201.pdf` (2026-06-30 quote PDF migrated into new folder 2026-08-17, **untracked**; **4-day carry-forward** at 2026-08-20 fetch — was 3-day at 2026-08-19) |
Total ≈ 1,206 deep-read notes on `main` + **1 untracked entry in the new `Review/` subfolder** (`zhou2023_computer_vision_microfluidics.md`, 2026-08-13 — first review-type subfolder; future-commit candidate) + **2 new untracked directories** (`templates/类器官IRB申请清单.md` + `celvivo_commercial/1331651_20260630_131201.pdf`, 2026-08-17). The 4 vendor subfolders (Celvivo / 3Brain / Cellink / Organoid) cover the canonical product KB per the wiki goal focus areas. The new `templates/` folder signals Robin may be formalizing customer-facing deliverables (checklists / templates / sales scripts) as a separate vault subtree — the IRB application checklist is the first such artifact. Total ≈ 1,206 deep-read notes on `main` + **1 untracked entry in the new `Review/` subfolder** (`zhou2023_computer_vision_microfluidics.md`, 2026-08-13 — first review-type subfolder; future-commit candidate) + **2 new untracked directories** (`templates/类器官IRB申请清单.md` + `celvivo_commercial/1331651_20260630_131201.pdf`, 2026-08-17). The 4 vendor subfolders (Celvivo / 3Brain / Cellink / Organoid) cover the canonical product KB per the wiki goal focus areas. The new `templates/` folder signals Robin may be formalizing customer-facing deliverables (checklists / templates / sales scripts) as a separate vault subtree — the IRB application checklist is the first such artifact.