From 7e904ecd7a0b5ae02877a5faaf60b5c1453a8554 Mon Sep 17 00:00:00 2001 From: OpenWiki Bot Date: Wed, 19 Aug 2026 02:22:15 +0800 Subject: [PATCH] chore: daily update 2026-08-19 --- .last-update.json | 2 +- quickstart.md | 20 ++- sources/README.md | 10 +- sources/git-repo.md | 264 ++++++++++++++++++++++++++---------- sources/hackernews.md | 30 +++- sources/index.md | 10 +- sources/nocodb.md | 7 + sources/ragflow.md | 7 + sources/seafile.md | 7 + sources/web-search.md | 24 +++- sources/wikijs.md | 7 + themes/05-robin-research.md | 11 +- 12 files changed, 296 insertions(+), 103 deletions(-) diff --git a/.last-update.json b/.last-update.json index 63ebd99..fdc8b18 100644 --- a/.last-update.json +++ b/.last-update.json @@ -1,5 +1,5 @@ { - "updatedAt": "2026-08-17T18:23:43.970Z", + "updatedAt": "2026-08-18T18:22:15.745Z", "command": "update", "model": "MiniMax-M3", "status": "complete", diff --git a/quickstart.md b/quickstart.md index b72116d..6a45e6a 100644 --- a/quickstart.md +++ b/quickstart.md @@ -33,12 +33,18 @@ tags: [quickstart, navigation, openwiki, status] ## Current status -- **Wiki state:** initialized — Hacker News, the local Obsidian vault, and Tavily web search are active and feeding `/sources/hackernews.md`, `/sources/git-repo.md`, `/sources/web-search.md`, and `/themes.md`. All 5 synthesis themes (`/themes/01-organoid-equipment.md`, `/themes/02-bioprinting.md`, `/themes/03-ai-agents.md`, `/themes/04-local-llm.md`, `/themes/05-robin-research.md`) are now generated; the 2026-08-17 daily update also created `/sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor). -- **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 web-search update attempts were skipped because the connector is not enabled and `TAVILY_API_KEY` is empty; the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below. +- **Wiki state:** initialized — Hacker News, the local Obsidian vault, and Tavily web search are active and feeding `/sources/hackernews.md`, `/sources/git-repo.md`, `/sources/web-search.md`, and `/themes.md`. All 5 synthesis themes (`/themes/01-organoid-equipment.md`, `/themes/02-bioprinting.md`, `/themes/03-ai-agents.md`, `/themes/04-local-llm.md`, `/themes/05-robin-research.md`) are now generated; the 2026-08-17 daily update created `/sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor); the 2026-08-18 daily update committed the synthesis-layer edits from the prior HN-1 2026-08-18T18:00Z + git-repo-1 2026-08-17T18:09Z runs but the wiki HEAD bumped to `1fc73ae` and the 9 uncommitted synthesis-layer edits re-appear because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files. +- **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 web-search update attempts were skipped because the connector is not enabled and `TAVILY_API_KEY` is empty; the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below. + +**Latest update — git-repo-1 (2026-08-18T18:10Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-18T18-10-12-916Z/manifest.json`. **Vault HEAD unchanged** at `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (same as the 2026-08-17T18:09Z fetch) — **0 new vault commits** in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window; the 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most recent vault activity (2 calendar days stale at this fetch). **0 new vault mtime changes** — the 25+ untracked vault files from the 2026-08-17T18:09Z fetch carry forward unchanged (including `celvivo_commercial/1331651_20260630_131201.pdf` last touched 2026-08-17 15:04 +0800 = 07:04 UTC, **before** the 24h window + `templates/类器官IRB申请清单.md` last touched 2026-08-16 10:27 +0800 = 02:27 UTC, well before the window + the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-new-`Review/`-subfolder file at **7-day carry-forward** since 2026-08-11 (mtime `2026-08-11 16:31:54 +0800`), uncommitted since then). **Wiki HEAD** bumped from `be4928553364a654b888807a44438b738072c2ce` (2026-08-17T18:09Z fetch) to **`1fc73aeeff541a9f0079ace0fd2d3206ee639193`** (2026-08-18T02:30 +0800, the 2026-08-18 sources-sync); **2 new automated wiki commits** in the 24-hour window: `8127797` chore: daily update 2026-08-18 (2026-08-18T02:23 +0800) + `1fc73ae` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, 2026-08-18T02:30 +0800 — the **fourth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + now `1fc73ae` 2026-08-18). Both commits are routine auto-orchestration: (a) `8127797` carried the synthesis-layer edits from the prior HN-1 2026-08-18T18:00Z + git-repo-1 2026-08-17T18:09Z runs (per `git show --stat 8127797` it touched `commitments.md` + `index.md` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,literature,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/{01-organoid-equipment,05-robin-research}.md`); (b) `1fc73ae` re-applied the count-data wipe pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the fourth consecutive time. **9 uncommitted wiki files** in working tree (re-appearing because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files): `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`. Wiki edits this run: (a) `/sources/git-repo.md` — refreshed frontmatter HEAD pointers (vault HEAD unchanged at `a4fa5a32`, wiki HEAD `be49285` → `1fc73ae`, tags + `2026-08-18`, timestamp → `2026-08-18T18:10:12Z`), refreshed the Connector / State section to the new `2026-08-18T18-10-12-916Z` raw manifest, refreshed the obsidian-vault working-tree-status section to 2026-08-18 (0 new commits, 0 new mtime changes, untracked set unchanged), refreshed the openwiki-wiki working-tree-status section to 2026-08-18 (2 new automated wiki commits + the carry-forward 9 uncommitted synthesis-layer edits), added 2 new entries at the top of the Recent-commits-for-wiki table (`1fc73ae` sources-sync 2026-08-18 + `8127797` daily update 2026-08-18), refreshed the Summary-of-last-48-hours table to add the 2026-08-17T18:09Z → 2026-08-18T18:10Z window data (0 vault commits / 2 wiki commits / operational row noting the **fourth** consecutive sources-sync re-applying the count-data wipe pattern), refreshed the Synthesis-policy section with this run's delta summary; (b) `/themes/05-robin-research.md` — vault-snapshot metadata refreshed (fetch timestamp → `2026-08-18T18:10:12Z`, raw-manifest path → the new `2026-08-18T18-10-12-916Z` manifest); the vault HEAD pointer stays `a4fa5a32` (unchanged across both 2026-08-17 and 2026-08-18 fetches); (c) `/quickstart.md` — added this "Latest update — git-repo-1 (2026-08-18T18:10Z)" paragraph; updated the Backlog git-repo entry to reflect the new wiki HEAD `1fc73ae` + 2 new automated wiki commits + the carry-forward 9 uncommitted files + the **fourth** consecutive sources-sync note. **No `/themes.md` row change, no `/commitments.md` row, no `/open-questions.md` row, no `/personal-logistics.md` item** — the vault delta is empty (no new commits, no new mtime changes) and the wiki delta is automated maintenance only; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the wiki-side automated maintenance commits. The "vault is silent on a 24-hour window" pattern continues to be normal cadence for Robin's workflow (the 2026-08-13 fetch was also a 0-new-vault-commits daily-cycle follow-up; the 2026-08-15 fetch was also a 0-new-vault-commits daily-cycle follow-up). Prior run was **web-search-1 attempted 2026-08-18 skipped** (sixth consecutive skip on the same code path) — see next paragraph. + +**Latest update — web-search-1 attempted 2026-08-18 skipped.** One source-specific update run for `web-search-1` (Web Search / Tavily) per the source-specific instruction "Track CelVivo / 3Brain / Cellink / organoid news from web (NOTE: needs TAVILY_API_KEY, currently empty)". The deterministic pull was **skipped**: `web-search-1` is not enabled in the runtime registry and `TAVILY_API_KEY` is empty, so no Tavily request was made and no raw data files were written. The nightly searxng-fallback slot `~/.openwiki/connectors/web-search/raw/2026-08-17T18-35-03-searxng-fallback/` is also empty — no web-search evidence of any kind landed in the 24-hour window. This is the **sixth consecutive skip** on the same code path (after 2026-08-08 + 2026-08-10 + 2026-08-12 + 2026-08-15 + 2026-08-17); the latest successful Tavily pull remains 2026-08-03 18:08 UTC. No new CelVivo / 3Brain / Cellink / organoid findings were available for synthesis; no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. Discord between on-disk `~/.openwiki/connectors/web-search/config.json` (which shows `enabled: true` + 6 Chinese queries) and the runtime registry (still reports the connector as disabled) is the same operational issue noted on the 2026-08-08 / 2026-08-10 / 2026-08-12 / 2026-08-15 / 2026-08-17 runs — recorded for traceability only, not a wiki-synthesis concern. Wiki edits this run: (a) `/sources/web-search.md` — added a "2026-08-18 attempted update — skipped" section ahead of the 2026-08-17 entry, following the established 5-field structure (Status / Authentication / Coverage / Synthesis / Operational note); updated the header line to mention the sixth skip; refreshed the 2026-08-17 entry's "Operational note" to mention the 2026-08-18 follow-up; refreshed the 2026-08-15 entry's "Operational note" to mention both the 2026-08-17 and 2026-08-18 follow-ups; added `2026-08-18` to the `tags` list; (b) `/sources/README.md` — refreshed Active connectors table + Connector roll table to reflect the 6-entry skip streak; (c) `/quickstart.md` — added this "Latest update — web-search-1 attempted 2026-08-18 skipped" paragraph; updated the Web Search connector row in "Current status" and "Adding sources" to reflect the 6-entry skip streak; updated the Backlog web-search entry likewise. **No new theme row, no commitment row, no open-question row, no personal-logistics item** — the synthesis layer is unchanged because the connector produced no new evidence. Prior run was **hackernews-1 update (2026-08-18T18:00Z)** — see next paragraph. + +**Latest update — hackernews-1 (2026-08-18T18:00Z).** One source-specific update run for `hackernews-1` (Hacker News — LLM-agent topic set) per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=hackernews` and wrote raw data at `~/.openwiki/connectors/hackernews/raw/2026-08-18T18-00-02-266Z/hackernews-results.json`. 2 feeds (`top` 21 resolved + `best` 10 resolved) → **27 unique items** (4 overlap: `49344825` Using the railway network as a flatbed scanner, `49345263` The Amazon tax, `49342719` Linux 7.3 vRAM, `49343559` Google buys Spirit data). 6 search queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`) returned **zero hits across all six** — all six Algolia queries returned `nbHits=0` in the 24 h window. The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **seventh pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-18 pull returns to fully-zero across all four vendor queries + the two workflow queries); Tavily (web-search) remains the productive lane for vendor news. **Two adjacents worth flagging for traceability** — **`49348136` "Launch HN: machine0 (YC S26) – Persistent CPU and GPU VMs from the CLI"** (19 pts, 12 cmts, top, `bwm`, https://machine0.io) — **strongest Robin-stack-adjacent item of the pull** by virtue of the **explicit "OpenClaw & Hermes run 24/7" citation in submitter text** — the strongest named-stack cross-walk on this pull and the strongest since the 2026-08-13 DeepSeek Harness developer preview (`49285244`). machine0 is a YC S26 launch for a CLI (`machine0 new mybox` creates a persistent cloud VM, billed by the minute, $0.013/hr up to 60 vCPU / 240 GB RAM + GPUs H100s/H200s/RTX 4000 Ada/8×H200, agents self-serve via CLI or MCP, Suspend/snapshot/resume, block storage 10 GB → 16 TB, per-VM profiles bundling credentials/MCP/prompts/env vars, reproducible builds via NixOS flakes or Ansible + Ubuntu); **adjacent-not-promoted** per scope because (a) 19-pt engagement is below the established refresh thresholds (46-pt MCP Memory + 100-pt vendor release bar); (b) machine0 is not on Robin's named daily-driver stack (Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI); (c) the established scope rule on non-named-stack agent-infrastructure launches keeps them adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself (per the 2026-07-30 / 2026-08-03 / 2026-08-10 / 2026-08-12 / 2026-08-13 / 2026-08-15 / 2026-08-16 / 2026-08-17 traceability entries); (d) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote a YC S26 launch to a `/themes.md` row by itself. Flagged for traceability because any Hermes / MiniMax-side response on a future pull (e.g. Hermes v0.21 release notes machine0 as a supported VM provider, or a Hermes Agent patch that integrates with machine0-style per-session profiles, or Robin personally adopting machine0 for a subagent / always-on-agent workflow) becomes the first corroborating event for a `hermes-agent-v0-19-quicksilver` row description extension on agent-compute-infrastructure patterns. The same launch was surfaced by the `Cellink` Algolia query as a noise hit on substring fragments (the demo video URL contains the word "calling") — the third HN item this week where a Cellink noise hit was actually an AI-agent item (after `49332326` Agent Mesh and `49330671` Deepseek Harness Plugin on 2026-08-17); **`49348627` "Why your Amazon order confirmation emails have become so unhelpful"** (18 pts, 7 cmts, top, `Macha`, https://www.theverge.com/ai-artificial-intelligence/977733/amazon-order-emails-google-gmail-ai-agents-data) — The Verge article on Amazon's AI-agent-driven order processing feeding AI training data via Gmail — touches the AI-agent data-pipeline lane (agent reads email → agent writes email → user-facing output); **adjacent-not-promoted** per scope (consumer-AI / consumer-email story about Amazon + Google + Gmail's AI agent data flow, not on Robin's named stack; 18-pt engagement is below the refresh thresholds). Three additional flag-for-traceability items stay adjacent-not-promoted under the existing scope discipline: **`49337602` GPT-5.6 Sol Pricing Cut by 50%** (601 pts best, 416 cmts, OpenRouter — OpenAI launch, off-scope); **`49348751` Claude Code weekly limits reduce by a third tomorrow** (66 pts top, 27 cmts — Claude Code wrapper change, off-scope; same rubric as the 2026-08-10 Auto mode default + 2026-08-08 Claude Bluetooth-tracking anecdote traceability entries); **`49348163` Degraded performance for multiple models** (133 pts top, 117 cmts, status.claude.com — Claude API status incident, **real-but-incidental exposure** since Robin uses Hermes / MiniMax as daily driver not Claude API). The remaining 22 of 27 unique top+best items fall outside Robin's named stack + 4 application domains per the brief's scope filter (highest-engagement items all off-scope: `49336573` AI;DR 1032 pts best, `49337392` Israel fake think tank 966 pts best, `49338459` How Bluesky draws its logo 671 pts best, `49338328` Quake Shareware 465 pts best, `49342719` Linux 7.3 vRAM 424 pts top+best, `49343559` Google buys Spirit 482 pts top+best, `49345263` The Amazon tax 508 pts top+best, `49338285` Fairphone 6 PostmarketOS 274 pts best, `49344825` Railway flatbed scanner 284 pts top+best, `49344811` Fairphone Gen 6 US 260 pts best, `49345220` Fixing Framework laptop 227 pts top, `49344654` Meta facial-recognition patent 193 pts top, `49342530` Rethinking Database Programming 191 pts top, `49345843` Sugar rationing cancer risk 147 pts top, `49342472` Finger social network 135 pts top, `49345476` Python Polars Cheatsheet 99 pts top, `49340710` California tire efficiency 68 pts top, `49349147` Data centers raise Phoenix temperatures 34 pts top, `49346538` Code-native 3D assets 28 pts top, `49348356` Diesel margins $100/barrel 22 pts top, `49348152` Superpowers not superintelligence 12 pts top, `49347178` Openleetcode Show HN 8 pts top). **Key call**: this pull produces **no directly-relevant item for any `/themes.md` row** — the closest items either (a) are upstream infrastructure launches at non-named-stack vendors (machine0 / Stripe / OpenRouter / Copilot / Claude Code / GPT-5.6 Sol) that stay adjacent under the established scope rule, or (b) fall outside Robin's 4 application domains (consumer AI / Amazon UX / Linux kernel / retro computing / climate policy). The `class-organoid-3d-bioprinting` row stays at Last seen 2026-08-12 (no organoid / 3D-bioprinting item — closest is `49346538` code-native 3D assets which is about programmable 3D assets, not bioprinting); the `agent-memory-architecture` row stays at Last seen 2026-08-13 (no OKF / MCP Memory / Karpathy LLM Wiki / Agent Mesh item — `49348136` machine0 uses NixOS + VM profiles, not OKF+memory schema; `49348627` Amazon order emails is consumer-AI / Gmail-data); the `MiniMax-m3` row stays at Last seen 2026-08-03 (no MiniMax model release; `49337602` GPT-5.6 Sol 50% pricing cut is an OpenAI launch on OpenRouter, not a MiniMax change); the `hermes-agent-v0-19-quicksilver` row stays at Last seen 2026-08-03 (no Hermes Agent release; `49348136` machine0 cites "Hermes" in submitter text but is not a Hermes Agent release itself); the `openwiki-brand` watchlist row stays at Last seen 2026-07-16 (no positive `openwiki` hits). The HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents (machine0 + Stripe/OpenRouter + Copilot Autofix + GPT-5.6 Sol pricing + Claude Code limits + Anthropic multi-agent research) + low-engagement application-domain watchlist items (organoid / neuroscience / Wired features)" rather than vendor-direct signals. Wiki edits this run: (a) `/sources/hackernews.md` — added new "Latest update — 2026-08-18 18:00 UTC" section ahead of the 2026-08-17 entry; demoted 2026-08-17 from "Latest" to a regular "Update" section; updated Connector section with the new raw dump path (`2026-08-18T18-00-02-266Z/hackernews-results.json`) and the new latest-fetch timestamp (`2026-08-18T18:00:30Z`); added a "Flag-for-traceability: Launch HN machine0, Amazon order emails AI-agent data flow" callout section; updated `tags` to include `2026-08-18`. **No `/themes.md` row change, no commitment row, no open-question row, no personal-logistics item** — the only synthesis-layer change is recording the seventh consecutive empty / noise-only Algolia lane streak in `/sources/hackernews.md` plus the two newly-flagged items for traceability. Prior run was **hackernews-1 update (2026-08-17T18:00Z)** — see next paragraph. **Latest update — git-repo-1 (2026-08-17T18:09Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-17T18-09-32-895Z/manifest.json`. **Vault HEAD** bumped from `297f106d2b137af3480261052ff080cbc48d5b48` (2026-08-15) to **`a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6`** (2026-08-16); **7 new vault commits** landed in the 2026-08-15T18:07Z → 2026-08-17T18:09Z 48-hour window, forming **two new paper LDR cycles in the same window** — **the first time since the 2026-07-28 / 2026-07-29 Parate / Lee / Hodge cluster that two new paper deep-reads landed on `main` in the same 48-hour window**: (a) **Quintard 2024 Nat Commun** (DOI 10.1038/s41467-024-45710-4, Wiki.js IDs 1719/1720/1722, NocoDB Id 3297) — microfluidic platform integrating functional vascularized organoids-on-chip — **4-commit LDR cycle** (`0fc8db24` adds file 189 lines → `290e9635` -v2 修图床/双 H1/落款 → `24c713de` -v3 Wiki.js 自带图床 6 张图 → `4073abf4` -v4 转发语标题/落款加粗/删 3Brain per the SOP "硬门槛合规修正" cleanup rule); 10 通道并行微流控芯片 + U 型捕获位 + hiPSC-BVO 30 天功能性灌注培养 + 跨类器官验证 [间充质球体 / BVO / 胰岛球体 / 肺类器官]; "与我们的产品" table lists Mimetas OrganoPlate ⭐⭐⭐⭐ [direct Phaseguide-based vascularized / kidney / intestine organ-on-chip competitor] + CelVivo ClinoStar ⭐⭐⭐ [upstream workflow: BVO day 0-15 needs rotating-wall suspension culture, ClinoStar is the canonical hardware for this stage; the paper's day 15 → chip-on-board handoff is the canonical CelVivo → organ-on-chip workflow] + Emulate Organ-Chip ⭐⭐⭐; (b) **Guo 2026 Front Cell Dev Biol** (DOI 10.3389/fcell.2026.1721946, Wiki.js ID 1724, NocoDB Id 3298) — organoid IRB / ethics systematic review — **3-commit LDR cycle** (`2e6f5989` adds file 170 lines → `00f824f2` -v2 修图床 (加 2 张 Wiki.js 自带图) → `a4fa5a32` -v3 补 Fig 1); 嘉兴市第一医院 + 嘉兴大学医学院视角; 类器官研究 IRB / 伦理审查 7 大强制要点系统综述 [样本来源/知情同意/数据隐私/共培养主体性/3R 动物福利/跨境监管/长期保存与终止使用] + 中国《人类遗传资源管理条例》+ 国际 ISSCR/GDPR/HIPAA 多国对照表; "与我们的产品" table lists CelVivo ClinoStar ⭐⭐⭐⭐ [临床转化类器官的伦理合规 — 7 大要点直接适用 ClinoStar 客户 IRB 申请; **Robin 推广 ClinoStar 给三甲医院时, 可附带本框架作为增值**] + Mimetas OrganoPlate ⭐⭐⭐⭐ [类器官 + 免疫细胞共培养伦理审查依据] + Emulate Organ-Chip ⭐⭐⭐. **The Quintard + Guo cluster brings net-new external evidence** to the vault — both papers are added to the `Organoid/` subfolder (count 659 → 661) + 30-day research output + the by-vendor table on `/themes/05-robin-research.md`. **2 new untracked directories** appeared in the working tree this fetch: (i) **`celvivo_commercial/1331651_20260630_131201.pdf`** (the 6-30 quote PDF migrated into a new folder, companion to the existing `05-Documents/Products/Celvivo/Industrial-Customers/` commercial-docs subtree — the new folder name signals Robin may be consolidating "Celvivo commercial" documents into a separate vault subtree); (ii) **`templates/类器官IRB申请清单.md`** (180 lines, **untracked**, Robin 8-16 实战沉淀, derived from the Guo 2026 ethics deep-read — **first customer-facing template produced from a single deep-read** — 7 mandatory points checklist + 5 customer Q&A + China vs International flow table + 10 attachments + 7 citations; Robin's canonical "Robin 培训客户 IRB 申请" core material). The carry-forward untracked file `Review/zhou2023_computer_vision_microfluidics.md` from the 2026-08-13 fetch remains untracked at the 2026-08-17 fetch (now joined by 2 new untracked working-tree directories). **Wiki HEAD** bumped from `2507925e27b83b4f9d2e6f3b9c939d081a90f9f2` (2026-08-15) to **`be4928553364a654b888807a44438b738072c2ce`** (2026-08-17); **4 new wiki-side commits** in the same 48-hour window: `151d22b` chore: daily update 2026-08-16 (committed `sources/index.md` from the 2026-08-15 dirty set) + `997b648` sources-sync 2026-08-16 + `5c70881` chore: daily update 2026-08-17 (**created new file `sources/openwiki-version-drift.md`** — auto-generated OpenWiki version-drift monitor; reports v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z) + `be49285` sources-sync 2026-08-17. **9 uncommitted wiki files** in working tree (down from 10 at the 2026-08-15 fetch — `sources/index.md` got committed in `151d22b`); the 9 dirty files are `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md` — accumulated synthesis-layer edits from the prior HN-1 2026-08-13 + HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + web-search-1 2026-08-15 + web-search-1 2026-08-17 + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + this git-repo-1 2026-08-17 runs, pending the next CLI orchestration commit. The `2507925` 2026-08-15 sources-sync count-data wipe (NocoDB 6614 → 0, Wiki.js 83 → 0, RAGFlow landing 200 → 000) carries forward as an open operational issue — the `997b648` 2026-08-16 sources-sync and the `be49285` 2026-08-17 sources-sync both re-applied the same operational pattern (NocoDB / Wiki.js / RAGFlow count values stayed zero across all 3 sources-syncs). Wiki edits this run: (a) `/sources/git-repo.md` — refreshed frontmatter HEAD pointers (vault HEAD `297f106d` → `a4fa5a32`, wiki HEAD `2507925` → `be49285`, tags + `2026-08-17`, timestamp → `2026-08-17T18:09:32Z`), refreshed the Connector / State section to the new `2026-08-17T18-09-32-895Z` raw manifest, refreshed the obsidian-vault working-tree-status section to 2026-08-17 (7 new vault commits + 2 new untracked dirs + the `Review/zhou2023_computer_vision_microfluidics.md` carries forward as still-untracked), refreshed the Recent-commits-for-vault table to put the 7 new 2026-08-16 commits on top of the 2026-08-12 cluster, refreshed the openwiki-wiki working-tree-status section to 2026-08-17 (4 new wiki commits + 9 uncommitted synthesis-layer edits — `sources/index.md` got committed in `151d22b`), refreshed the Recent-commits-for-wiki table to put the 4 new 2026-08-16/2026-08-17 commits on top of the 2026-08-15 cluster, refreshed the Summary-of-last-48-hours table to add the 2026-08-15T18:07Z → 2026-08-17T18:09Z window data (7 vault commits / 4 wiki commits / 9 uncommitted wiki files / 1 new wiki file + 2 new untracked dirs + 4-day carry-forward on `Review/` subfolder), refreshed the Notable-entity section to add (i) "Quintard 2024 microfluidic vascularized organoid chip" entry (with 4-star Mimetas/CelVivo/Emulate mapping) + (ii) "Guo 2026 organoid ethics systematic review" entry (with 4-star Mimetas/CelVivo/Emulate mapping + IRB checklist template cross-link) + refreshed the 04-Literature/Deep-Reads/ breakdown table to Organoid/ 659 → 661 + the new templates/ + celvivo_commercial/ rows, refreshed the Synthesis-policy section with this run's delta summary; (b) `/themes/05-robin-research.md` — frontmatter timestamp + tags updated; vault snapshot HEAD `297f106d` → `a4fa5a32` + raw manifest path updated; ER-diagram entity label updated (deep-reads `~1,205` → `~1,207`; new `Templates` entity added); 04-Literature/Deep-Reads/ breakdown table extended with Organoid/ 659 → 661 + new `Templates/` + `CelVivo-commercial/` rows; 30-day research output table extended with a new top-row entry for the 2026-08-16 Quintard + Guo cluster; by-vendor table extended with Quintard 2024 + Guo 2026 cross-cuts; new sales-ammunition paragraph documenting the `templates/类器官IRB申请清单.md` v1.0 customer-facing template + the new CelVivo industrial-customers program working-tree addition (`celvivo_commercial/` folder convention watchlist); worked-examples table extended with Quintard 2024 + Guo 2026 rows; "What to read next" extended with the new vault paths; (c) `/themes/01-organoid-equipment.md` — added **Quintard 2024 Nat Commun** as the first microfluidic / organ-on-chip paper in the theme (CelVivo ClinoStar rating 3 upstream workflow + Mimetas OrganoPlate rating 4 + Emulate Organ-Chip rating 3); added **Guo 2026 Front Cell Dev Biol** to the "Regulatory and China-specific context" section (CelVivo ClinoStar ⭐⭐⭐⭐ clinical-translation IRB compliance — the 7 mandatory points directly apply to ClinoStar customer IRB submissions; Robin 推广 ClinoStar 给三甲医院时, 可附带 Guo 2026 框架作为增值); "What to read next" extended with the new vault paths + the IRB checklist template path + the regulatory-shifts row updated to include "Guo 2026 IRB"; (d) `/sources/literature.md` — added a new 2026-08-16 section ahead of the 2026-08-09 section with the Quintard 2024 + Guo 2026 entries; frontmatter `description` updated to mention the new IRB / ethics + vascularized organoid + microfluidic / organ-on-chip application domains; (e) `/sources/README.md` — Active connectors table row for Git repo bumped to "last 2026-08-17 18:09 UTC — 7 new vault commits since 2026-08-15: Quintard 2024 + Guo 2026 LDR cycles + 2 new untracked dirs `celvivo_commercial/` + `templates/`; 4 new wiki commits since 2026-08-15 + 1 new wiki file `sources/openwiki-version-drift.md`"; Connector roll table row for Git repo similarly refreshed; (f) `/commitments.md` — added **guo-2026-organoid-irb-checklist-rollout** commitment (Owner: me; fold IRB application checklist into CelVivo industrial-customers program + Robin customer-training core material; commit `templates/类器官IRB申请清单.md` and add a synthesis page at `/sources/literature-guo-2026-front-cell-dev-biol-organoid-ethics-deepread.md`); tags updated with `guo-2026-organoid-irb-checklist-rollout`; (g) `/quickstart.md` — added this "Latest update — git-repo-1 (2026-08-17T18:09Z)" paragraph; updated "Wiki state" to mention `sources/openwiki-version-drift.md`; updated the Backlog git-repo entry to reflect the new vault HEAD `a4fa5a32` + 7 new vault commits + 2 new untracked dirs + the new wiki HEAD `be49285` + 4 new wiki commits + 1 new wiki file + 9 uncommitted synthesis-layer edits. **No `/themes.md` row change** — the Quintard + Guo cluster is two new paper deep-reads (single-event evidence), not a recurring signal; it routes into the existing `class-organoid-3d-bioprinting` evidence + a new by-vendor entry on `/themes/05-robin-research.md` rather than needing a new theme row. **No new open-question row** — the IRB checklist template resolves IRB / ethics ambiguity around Chinese hospital organoid research and the workflow question is fully answered by the v1.0 template + the commitment; no `/open-questions.md` entry needed. **No `/personal-logistics.md` item.** Prior run was -**Latest update — web-search-1 attempted 2026-08-17 skipped.** One source-specific update run for `web-search-1` (Web Search / Tavily) per the source-specific instruction "Track CelVivo / 3Brain / Cellink / organoid news from web (NOTE: needs TAVILY_API_KEY, currently empty)". The deterministic pull was **skipped**: `web-search-1` is not enabled in the runtime registry and `TAVILY_API_KEY` is empty, so no Tavily request was made and no raw data files were written. The nightly searxng-fallback slot `~/.openwiki/connectors/web-search/raw/2026-08-16T18-35-03-searxng-fallback/` is also empty — no web-search evidence of any kind landed in the 24-hour window. This is the **fifth consecutive skip** on the same code path (after 2026-08-08 + 2026-08-10 + 2026-08-12 + 2026-08-15); the latest successful Tavily pull remains 2026-08-03 18:08 UTC. No new CelVivo / 3Brain / Cellink / organoid findings were available for synthesis; no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. Discord between on-disk `~/.openwiki/connectors/web-search/config.json` (which shows `enabled: true` + 6 Chinese queries) and the runtime registry (still reports the connector as disabled) is the same operational issue noted on the 2026-08-08 / 2026-08-10 / 2026-08-12 / 2026-08-15 runs — recorded for traceability only, not a wiki-synthesis concern. Wiki edits this run: (a) `/sources/web-search.md` — added a "2026-08-17 attempted update — skipped" section ahead of the 2026-08-15 entry, following the established 5-field structure (Status / Authentication / Coverage / Synthesis / Operational note); updated the header line to mention the fifth skip; refreshed the 2026-08-15 entry's "Operational note" to mention the 2026-08-17 follow-up; added `2026-08-17` to the `tags` list; (b) `/sources/README.md` — refreshed Active connectors table + Connector roll table to reflect the 5-entry skip streak; (c) `/quickstart.md` — added this "Latest update — web-search-1 attempted 2026-08-17 skipped" paragraph; updated the Web Search connector row in "Current status" and "Adding sources" to reflect the 5-entry skip streak; updated the Backlog web-search entry likewise. **No new theme row, no commitment row, no open-question row, no personal-logistics item** — the synthesis layer is unchanged because the connector produced no new evidence. Prior run was **hackernews-1 update (2026-08-17T18:00Z)** — see next paragraph. +**Update — web-search-1 attempted 2026-08-17 skipped.** One source-specific update run for `web-search-1` (Web Search / Tavily) per the source-specific instruction "Track CelVivo / 3Brain / Cellink / organoid news from web (NOTE: needs TAVILY_API_KEY, currently empty)". The deterministic pull was **skipped**: `web-search-1` was not enabled in the runtime registry and `TAVILY_API_KEY` was empty, so no Tavily request was made and no raw data files were written. The nightly searxng-fallback slot `~/.openwiki/connectors/web-search/raw/2026-08-16T18-35-03-searxng-fallback/` was also empty — no web-search evidence of any kind landed in the 24-hour window. This was the **fifth consecutive skip** on the same code path (after 2026-08-08 + 2026-08-10 + 2026-08-12 + 2026-08-15); the latest successful Tavily pull remains 2026-08-03 18:08 UTC. No new CelVivo / 3Brain / Cellink / organoid findings were available for synthesis; no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. Discord between on-disk `~/.openwiki/connectors/web-search/config.json` (which shows `enabled: true` + 6 Chinese queries) and the runtime registry (still reports the connector as disabled) was the same operational issue noted on the 2026-08-08 / 2026-08-10 / 2026-08-12 / 2026-08-15 runs — recorded for traceability only, not a wiki-synthesis concern. Wiki edits this run: (a) `/sources/web-search.md` — added a "2026-08-17 attempted update — skipped" section ahead of the 2026-08-15 entry, following the established 5-field structure (Status / Authentication / Coverage / Synthesis / Operational note); updated the header line to mention the fifth skip; refreshed the 2026-08-15 entry's "Operational note" to mention the 2026-08-17 follow-up; added `2026-08-17` to the `tags` list; (b) `/sources/README.md` — refreshed Active connectors table + Connector roll table to reflect the 5-entry skip streak; (c) `/quickstart.md` — added this "Latest update — web-search-1 attempted 2026-08-17 skipped" paragraph; updated the Web Search connector row in "Current status" and "Adding sources" to reflect the 5-entry skip streak; updated the Backlog web-search entry likewise. **No new theme row, no commitment row, no open-question row, no personal-logistics item** — the synthesis layer was unchanged because the connector produced no new evidence. Prior run was **hackernews-1 update (2026-08-17T18:00Z)** — see next paragraph. **Latest update — hackernews-1 (2026-08-17T18:00Z).** One source-specific update run for `hackernews-1` (Hacker News — LLM-agent topic set) per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=hackernews` and wrote raw data at `~/.openwiki/connectors/hackernews/raw/2026-08-17T18-00-01-808Z/hackernews-results.json`. 2 feeds (`top` 26 + `best` 17) → **34 unique items** (9 overlap: `49324985` Qwen 3.8 27B, `49324087` Anthropic Claude watermarks, `49330781` DuckDB v2.0, `49326816` Linear algebra, `49325789` AI regulation, `49325061` Reticulum, `49329575` GPT 5.6 Sol, `49330597` GitHub incident, `49323686` Nvidia/OpenAI infra reduction). 6 search queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`) returned **zero vendor-anchored hits** — `organoid` (6 nbHits, all string-collision noise on the "organi-" substring), `CelVivo` (0), `3Brain` (6 nbHits, all string-collision noise on the "brain" substring), `Cellink` (6 nbHits, all string-collision noise on "calling"/"ceiling"/"celine"/"welling" substrings), `openwiki` (0), `deepagents` (0). The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **sixth pull since 2026-08-07 to have an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls; the 2026-08-10 + 2026-08-12 pulls were also noise-only on the substring queries); Tavily (web-search) remains the productive lane for vendor news. **Three adjacents worth flagging for traceability** — **`49323381` "Stripe will reportedly acquire OpenRouter for $7B+"** (439 pts, 271 cmts, best, TechCrunch, `zacharyozer`, https://techcrunch.com/2026/08/16/stripe-will-reportedly-acquire-ai-gateway-startup-openrouter-for-7b/) — strongest single business event in the AI inference lane this pull, OpenRouter is a primary MiniMax-adjacent inference provider alongside the direct MiniMax-M3 HuggingFace + Tweet launch points; **`49331423` "AI-Generated GitHub Copilot 'Autofix' Allowed Compromise of Snowflake's Jira"** (168 pts, 81 cmts, top, Wiz blog, `galnagli`, https://www.wiz.io/blog/red-agent-snowflake-copilot-cicd-bug) — strongest agent-supply-chain / agent-tool-use security incident to surface on HN top this year, an AI-generated code suggestion from GitHub Copilot's agentic self-fix feature was allowed to merge into Snowflake's CI/CD and compromise the Snowflake Jira instance; **`49332326` "Show HN: Agent Mesh – Shared memory for multi-Agent coordination"** (1 pt, top, `balgeman`, github.com/cbalgeman/agent-mesh) — adjacent to the `agent-memory-architecture` macro-pattern (Human + multi-Agent shared memory + SQLite Agent Mail + decision log + Workbench dashboard + Claude + CODEX via `codex exec` + all decision modifications require Human approval), but 1-pt engagement keeps it adjacent-not-promoted and the implementation uses SQLite + ids rather than OKF frontmatter; surfaced as a `Cellink` Algolia string-collision noise hit on the word "calling" in body text, not because it relates to Cellink bioprinters. Two additional flag-for-traceability items stay adjacent-not-promoted: **`49324985` Qwen 3.8 27B is excellent, but it defaults to overthinking things** (732 pts, 344 cmts, top+best, Simon Willison, `bilsbie` — **highest-engagement item of the pull**; open-weight AI, off-scope per brief; the third Qwen 3.8× item across three pulls in 7 days confirms the recurrence but the open-weight-AI scope rule still applies); **`49324087` Anthropic's 'watermark' text adulteration in Claude is a perversion of writing** (670 pts, 577 cmts, top+best, Daring Fireball, `ropbear` — Claude watermarking critique, off-scope per brief). **Key call**: this pull produces **no directly-relevant item for any `/themes.md` row** — the closest items either (a) are upstream business events at non-named-stack vendors (Stripe / OpenRouter / Copilot / Simon Willison's open-weight review lane) that stay adjacent under the established scope rule, or (b) sit on the agent-memory / shared-decision-log lane where the 1-pt Agent Mesh Show HN doesn't corroborate the OKF+memory schema pattern that drove the 2026-08-13 MCP Memory / OKF refresh. The `class-organoid-3d-bioprinting` row stays at Last seen 2026-08-12 (no organoid item — the 6 organoid Algolia hits are all string-collision noise); the `agent-memory-architecture` row stays at Last seen 2026-08-13 (Agent Mesh at 1 pt is below the established refresh threshold + uses SQLite rather than OKF); the `MiniMax-m3` row stays at Last seen 2026-08-03 (no MiniMax model release; `49323381` Stripe-OpenRouter is an upstream business event, not a MiniMax change); the `hermes-agent-v0-19-quicksilver` row stays at Last seen 2026-08-03 (no Hermes Agent release; `49331423` Copilot Autofix is a GitHub Copilot incident, not a Hermes Agent incident); the `openwiki-brand` watchlist row stays at Last seen 2026-07-16 (no positive `openwiki` hits). The HN lane's stable role is now "high-engagement inference-lane adjacents (Stripe/OpenRouter) + agent-stack security adjacents (Copilot Autofix) + show-HN agent-memory architecture watchlist (Agent Mesh) + life-science application-domain watchlist items (organoid / neuroscience / Wired features)" rather than vendor-direct signals. Wiki edits this run: (a) `/sources/hackernews.md` — added new "Latest update — 2026-08-17 18:00 UTC" section ahead of the 2026-08-16 entry; demoted 2026-08-16 from "Latest" to a regular "Update" section; updated Connector section with the new raw dump path (`2026-08-17T18-00-01-808Z/hackernews-results.json`) and the new latest-fetch timestamp (`2026-08-17T18:00:31Z`); added a "Flag-for-traceability: Stripe/OpenRouter, Copilot Autofix Snowflake Jira, Qwen 3.8 27B, Agent Mesh" callout section; updated `tags` to include `2026-08-17`. **No `/themes.md` row change, no commitment row, no open-question row, no personal-logistics item** — the only synthesis-layer change is recording the sixth consecutive empty / noise-only Algolia lane streak in `/sources/hackernews.md` plus the four newly-flagged items for traceability. Prior run was **hackernews-1 update (2026-08-16T18:00Z)** — see next paragraph. @@ -72,7 +78,7 @@ When Robin is ready, configure connectors to start populating the wiki: - **Slack** — `openwiki auth slack` (needs Slack user token with `search:read` for definitive self-message search) - **Notion** — configure Notion MCP via `~/.openwiki/connectors/notion/` - **X / Twitter** — `openwiki auth x` (needs `OPENWIKI_X_ACCESS_TOKEN`) -- **Web Search** — set `TAVILY_API_KEY` (active; latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 update attempts were skipped because the connector is not enabled in the runtime registry — see [/sources/web-search.md](/sources/web-search.md)) +- **Web Search** — set `TAVILY_API_KEY` (active; latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 update attempts were skipped because the connector is not enabled in the runtime registry — see [/sources/web-search.md](/sources/web-search.md)) - **Hacker News** — public feeds, no auth needed - **Local git repo** — point the `git-repo` connector at a repo path @@ -86,9 +92,9 @@ Deferred until Robin configures connectors or asks for specific documentation: - **Slack evidence index** — `/sources/slack.md` (no Slack connector configured yet) - **Notion evidence index** — `/sources/notion.md` (no Notion MCP configured yet) - **X / Twitter evidence index** — `/sources/x.md` (no X connector configured yet) -- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-08-17 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); **sixth pull since 2026-08-07 to have an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls; the 2026-08-10 + 2026-08-12 pulls were also noise-only on the substring queries) — vendor-anchored footprint remains null on the HN lane and Tavily (web-search) remains the productive lane; **three adjacents worth flagging for traceability surfaced this pull: `49323381` "Stripe will reportedly acquire OpenRouter for $7B+"** (439 pts, 271 cmts, best, TechCrunch, `zacharyozer`, https://techcrunch.com/2026/08/16/stripe-will-reportedly-acquire-ai-gateway-startup-openrouter-for-7b/) — strongest single business event in the AI inference lane this pull, OpenRouter is a primary MiniMax-adjacent inference provider; **`49331423` "AI-Generated GitHub Copilot 'Autofix' Allowed Compromise of Snowflake's Jira"** (168 pts, 81 cmts, top, Wiz blog, `galnagli`) — strongest agent-supply-chain / agent-tool-use security incident to surface on HN top this year, AI-generated code from Copilot's self-fix feature compromised Snowflake's Jira instance; **`49332326` "Show HN: Agent Mesh – Shared memory for multi-Agent coordination"** (1 pt, top, `balgeman`) — adjacent to the `agent-memory-architecture` macro-pattern (Human + multi-Agent shared memory + SQLite Agent Mail + decision log + Workbench dashboard + Claude + CODEX via `codex exec` + all decision modifications require Human approval), but 1-pt engagement keeps it adjacent-not-promoted and the implementation uses SQLite + ids rather than OKF frontmatter; surfaced as a `Cellink` Algolia string-collision noise hit. **All three stay adjacent-not-promoted** per the established scope rule that inference-provider business events + non-named-stack agent-security incidents + non-OKF shared-memory implementations stay adjacent-not-promoted unless they directly corroborate the existing row's pattern — so no `/themes.md` row Last-seen refresh; two additional flag-for-traceability items stay adjacent-not-promoted under existing scope discipline: **`49324985` Qwen 3.8 27B is excellent, but it defaults to overthinking things** (732 pts, 344 cmts, top+best, Simon Willison, `bilsbie` — **highest-engagement item of the pull**; open-weight AI, off-scope per brief); **`49324087` Anthropic's 'watermark' text adulteration in Claude is a perversion of writing** (670 pts, 577 cmts, top+best, Daring Fireball, `ropbear` — Claude watermarking critique, off-scope per brief) — see HN source page) -- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 update attempts skipped — connector not enabled in runtime registry, `TAVILY_API_KEY` missing; disk config shows `enabled: true` + 6 Chinese queries but the runtime registry disagrees — operational concern, not a wiki-synthesis concern) -- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-17 18:09 UTC — covers Robin's Obsidian vault (HEAD `a4fa5a32` 2026-08-16, **7 new vault commits since the 2026-08-15 fetch**: the 2026-08-16 **Quintard 2024 Nat Commun microfluidic vascularized organoid chip 4-commit LDR cycle** `0fc8db24` → `290e9635` → `24c713de` → `4073abf4` [Wiki IDs 1719/1720/1722, NocoDB Id 3297] + the 2026-08-16 **Guo 2026 Front Cell Dev Biol organoid ethics systematic review 3-commit LDR cycle** `2e6f5989` → `00f824f2` → `a4fa5a32` [Wiki ID 1724, NocoDB Id 3298] — **first time two new paper deep-reads landed on `main` in the same 48-hour window since the 2026-07-28 / 2026-07-29 Parate / Lee / Hodge cluster**) + OpenWiki wiki (HEAD `be49285` 2026-08-17, **4 new wiki commits since the 2026-08-15 fetch**: `151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) + **1 new wiki file**: `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z); **20 vault commits since 2026-08-03 fetch** (was 13 at the 2026-08-15 fetch; the +7 delta is the Quintard 2024 + Guo 2026 clusters); **23 untracked vault files + 2 new untracked directories**: 8 × `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + **the first entry in the new `Review/` subfolder** (`04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` — Zhou 2023 computer vision + microfluidics, Robin deep-read in progress, still-uncommitted at the 2026-08-17 fetch) + `__pycache__/...pyc` Python build noise + **NEW** `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder) + **NEW** `templates/类器官IRB申请清单.md` v1.0 (180 lines, derived from the Guo 2026 ethics deep-read — **first customer-facing template produced from a single deep-read**); wiki-side carries **9 uncommitted synthesis-layer edits** (down from 10 at the 2026-08-15 fetch — `sources/index.md` got committed in `151d22b`) accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + web-search-1 2026-08-15 + web-search-1 2026-08-17 + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + this git-repo-1 2026-08-17 runs; **operational issue carries forward** — the `2507925` 2026-08-15 sources-sync count-data wipe (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000) is now re-applied by the `997b648` 2026-08-16 sources-sync and the `be49285` 2026-08-17 sources-sync (NocoDB / Wiki.js / RAGFlow count values stay zero across all 3 sources-syncs); the on-disk source configs are unaffected; data is recoverable from `git show 1737454:sources/nocodb.md` etc. — recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected) +- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-08-18 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); **seventh pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-18 pull returns to fully-zero across all four vendor queries + the two workflow queries) — vendor-anchored footprint remains null on the HN lane and Tavily (web-search) remains the productive lane; **two adjacents worth flagging for traceability surfaced this pull: `49348136` "Launch HN: machine0 (YC S26) – Persistent CPU and GPU VMs from the CLI"** (19 pts, 12 cmts, top, `bwm`, https://machine0.io) — **strongest Robin-stack-adjacent item of the pull** by virtue of the **explicit "OpenClaw & Hermes run 24/7" citation in submitter text** — the strongest named-stack cross-walk on this pull and the strongest since the 2026-08-13 DeepSeek Harness developer preview (`49285244`); machine0 is a YC S26 launch for a CLI (`machine0 new mybox` creates a persistent cloud VM, billed by the minute, $0.013/hr up to 60 vCPU / 240 GB RAM + GPUs H100s/H200s/RTX 4000 Ada/8×H200, agents self-serve via CLI or MCP, Suspend/snapshot/resume, block storage 10 GB → 16 TB, per-VM profiles bundling credentials/MCP/prompts/env vars, reproducible builds via NixOS flakes or Ansible + Ubuntu); **adjacent-not-promoted** per scope because (a) 19-pt engagement is below the established refresh thresholds (46-pt MCP Memory + 100-pt vendor release bar); (b) machine0 is not on Robin's named daily-driver stack; (c) the established scope rule on non-named-stack agent-infrastructure launches keeps them adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself; (d) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote a YC S26 launch to a `/themes.md` row by itself; any Hermes / MiniMax-side response on a future pull (e.g. Hermes v0.21 release notes machine0 as a supported VM provider, or a Hermes Agent patch that integrates with machine0-style per-session profiles, or Robin personally adopting machine0 for a subagent / always-on-agent workflow) becomes the first corroborating event for a `hermes-agent-v0-19-quicksilver` row description extension on agent-compute-infrastructure patterns; the same launch was surfaced by the `Cellink` Algolia query as a noise hit on substring fragments (the demo video URL contains the word "calling") — the third HN item this week where a Cellink noise hit was actually an AI-agent item (after `49332326` Agent Mesh and `49330671` Deepseek Harness Plugin on 2026-08-17); **`49348627` "Why your Amazon order confirmation emails have become so unhelpful"** (18 pts, 7 cmts, top, `Macha`, https://www.theverge.com/ai-artificial-intelligence/977733/amazon-order-emails-google-gmail-ai-agents-data) — The Verge article on Amazon's AI-agent-driven order processing feeding AI training data via Gmail — touches the AI-agent data-pipeline lane (agent reads email → agent writes email → user-facing output); **adjacent-not-promoted** per scope (consumer-AI / consumer-email story about Amazon + Google + Gmail's AI agent data flow, not on Robin's named stack; 18-pt engagement is below the refresh thresholds). Three additional flag-for-traceability items stay adjacent-not-promoted under existing scope discipline: **`49337602` GPT-5.6 Sol Pricing Cut by 50%** (601 pts best, 416 cmts, OpenRouter — OpenAI launch, off-scope); **`49348751` Claude Code weekly limits reduce by a third tomorrow** (66 pts top, 27 cmts — Claude Code wrapper change, off-scope; same rubric as the 2026-08-10 Auto mode default + 2026-08-08 Claude Bluetooth-tracking anecdote traceability entries); **`49348163` Degraded performance for multiple models** (133 pts top, 117 cmts, status.claude.com — Claude API status incident, **real-but-incidental exposure** since Robin uses Hermes / MiniMax as daily driver not Claude API) — see HN source page) +- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 update attempts skipped — connector not enabled in runtime registry, `TAVILY_API_KEY` missing; disk config shows `enabled: true` + 6 Chinese queries but the runtime registry disagrees — operational concern, not a wiki-synthesis concern) +- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-18 18:10 UTC — covers Robin's Obsidian vault (HEAD `a4fa5a32` 2026-08-16, **0 new vault commits + 0 new mtime changes since the 2026-08-17T18:09Z fetch**; vault is silent in the 24-hour window; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity, 2 calendar days stale; the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-new-`Review/`-subfolder is at **7-day carry-forward** (mtime `2026-08-11 16:31:54 +0800`), uncommitted since 2026-08-11, structural signal continues to weaken) + OpenWiki wiki (HEAD `1fc73ae` 2026-08-18, **2 new automated wiki commits since the 2026-08-17T18:09Z fetch**: `8127797` chore: daily update 2026-08-18 (2026-08-18T02:23 +0800) + `1fc73ae` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, 2026-08-18T02:30 +0800, the **fourth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18) + the prior 2026-08-17 fetch's 4 wiki commits (`151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) + **1 new wiki file from the 2026-08-17 fetch**: `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z); **20 vault commits since 2026-08-03 fetch** (unchanged across the 2026-08-17 + 2026-08-18 fetches); **25+ untracked vault files + 2 untracked directories** carry forward unchanged from the 2026-08-17T18:09Z fetch (including 8 × `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + the 7-day carry-forward `Review/zhou2023_computer_vision_microfluidics.md` + `__pycache__/...pyc` Python build noise + `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` v1.0; **0 new untracked files in the 24-hour window**); wiki-side carries **9 uncommitted synthesis-layer edits** (re-appearing because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files: `.last-update.json` + `quickstart.md` + `sources/README.md` + `sources/hackernews.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`); **operational issue carries forward** — the `2507925` 2026-08-15 sources-sync count-data wipe (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000) is now re-applied by the `997b648` 2026-08-16 sources-sync + the `be49285` 2026-08-17 sources-sync + the `1fc73ae` 2026-08-18 sources-sync (NocoDB / Wiki.js / RAGFlow count values stay zero across all **4** sources-syncs); the on-disk source configs are unaffected; data is recoverable from `git show 1737454:sources/nocodb.md` etc. — recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected) - **Project / people / company pages** — only created when durable entities emerge from ingested data These are intentionally blank until there is real evidence to put in them. Populating them with placeholders would dilute the synthesis layer..esis layer..sis platform 4-commit LDR cycle** (`e542c977` adds file 186 lines → `8699a154` page 946 9 项 SOP 重写版 105+/122- → `aacba7aa` frontmatter title 改中文 1 line → `297f106d` page 934 修齐 5+/4-) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3 轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型; Wiki.js Id=1716, NocoDB Id=770); **23 untracked vault files** unchanged from the 2026-08-13 fetch (no new untracked files in the 24-hour window) — including 8 × `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index + **the first entry in the new `Review/` subfolder** (`04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` — Zhou 2023 computer vision + microfluidics, Robin deep-read in progress, still-uncommitted at the 2026-08-15 fetch) + `__pycache__/...pyc` Python build noise; wiki-side carries **10 uncommitted synthesis-layer edits** accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + web-search-1 2026-08-15 + this git-repo-1 2026-08-15 runs; **one operational issue surfaced this run** — the `2507925` 2026-08-15 sources-sync committed empty count values for NocoDB / SeaFile / Wiki.js / RAGFlow (NocoDB 6614 → 0 records, Wiki.js 83 → 0 unique pages, RAGFlow landing 200 → 000); the on-disk source configs are unaffected; data is recoverable from `git show 1737454:sources/nocodb.md` etc. — recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the source-page counters and is not affected) diff --git a/sources/README.md b/sources/README.md index 28f1213..531b09a 100644 --- a/sources/README.md +++ b/sources/README.md @@ -15,7 +15,7 @@ Per-connector evidence indexes. Each connector gets its own page (for example `g | --- | --- | --- | | Hacker News (`hackernews-1`, LLM-agent topics) | [/sources/hackernews.md](/sources/hackernews.md) | active | | Git repo (`git-repo-1`, Obsidian vault + OpenWiki wiki) | [/sources/git-repo.md](/sources/git-repo.md) | active (last 2026-08-17 18:09 UTC — 7 new vault commits since 2026-08-15: Quintard 2024 + Guo 2026 LDR cycles + 2 new untracked dirs `celvivo_commercial/` + `templates/`; 4 new wiki commits since 2026-08-15 + 1 new wiki file `sources/openwiki-version-drift.md`) | -| Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing) | +| Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing) | Additional connectors appear here automatically once they are authenticated and ingested at least once. @@ -27,9 +27,9 @@ Additional connectors appear here automatically once they are authenticated and | Slack | not configured | `openwiki auth slack` | Needs `search:read` for definitive self-message search; otherwise falls back to recent conversations. | | Notion | not configured | Notion MCP credentials | Discovery via `openwiki_list_mcp_tools`; do not guess tool names. | | X / Twitter | not configured | `OPENWIKI_X_ACCESS_TOKEN` via `openwiki auth x` | Streams: `home_timeline`, `user_posts`, `mentions`, `bookmarks`, `list_posts`. | -| Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 update attempts were skipped because the connector was not enabled in the runtime registry. Evidence at [/sources/web-search.md](/sources/web-search.md). | -| Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Source-specific query set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` (LLM-agent topics per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories"). Last successful pull 2026-08-17 18:00 UTC — sixth pull since 2026-08-07 to have an empty / noise-only Algolia lane on vendor queries (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls and the 2026-08-10 + 2026-08-12 noise-only pulls; empty-pulls-on-vendor-queries is normal cadence, not an outage). Evidence at [/sources/hackernews.md](/sources/hackernews.md). | -| Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-17 18:09 UTC — 7 new vault commits since 2026-08-15 (Quintard 2024 + Guo 2026 LDR cycles; 2 new untracked dirs `celvivo_commercial/` + `templates/`); 4 new wiki commits since 2026-08-15 + 1 new wiki file `sources/openwiki-version-drift.md`. | +| Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 update attempts were skipped because the connector was not enabled in the runtime registry. Evidence at [/sources/web-search.md](/sources/web-search.md). | +| Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Source-specific query set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` (LLM-agent topics per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories"). Last successful pull 2026-08-18 18:00 UTC — seventh pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-18 pull returns to fully-zero across all four vendor queries + the two workflow queries; empty-pulls-on-vendor-queries is normal cadence, not an outage). Evidence at [/sources/hackernews.md](/sources/hackernews.md). | +| Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-18 18:10 UTC — **0 new vault commits in the 24-hour window** (vault silent; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity); 2 new automated wiki commits since the 2026-08-17 fetch (`8127797` daily update 2026-08-18 + `1fc73ae` sources-sync 2026-08-18, the fourth consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern). | ## How new source pages get created @@ -39,4 +39,4 @@ When a connector ingests for the first time, an update run will: 2. Create `/sources/.md` with the ingestion manifest, freshness, and compact evidence notes. 3. Route durable items into the canonical pages and add a row in `/themes.md` if a recurring signal emerges. -Until then, the new connector only has a row in the active connectors table above and no evidence page of its own.. \ No newline at end of file +Until then, the new connector only has a row in the active connectors table above and no evidence page of its own..its own.. \ No newline at end of file diff --git a/sources/git-repo.md b/sources/git-repo.md index 4e3c37d..028ba65 100644 --- a/sources/git-repo.md +++ b/sources/git-repo.md @@ -1,10 +1,10 @@ --- type: "Reference" title: "Git repo — evidence index (Obsidian vault, Robin)" -description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, 7 new vault commits in the 2026-08-15T18:07Z → 2026-08-17T18:09Z 48-hour window) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD be49285, 2026-08-17). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here." +description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, 7 new vault commits in the 2026-08-15T18:07Z → 2026-08-17T18:09Z 48-hour window; **0 new vault commits in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window — vault is silent**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD 1fc73ae, 2026-08-18, **2 new automated wiki commits in the 2026-08-17T18:09Z → 2026-08-18T18:10Z window: `8127797` daily update 2026-08-18 + `1fc73ae` sources-sync 2026-08-18**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here." resource: "~/.openwiki/connectors/git-repo/config.json" -tags: [git-repo, evidence, vault, openwiki-wiki, source, 2026-08-17, 2026-08-15, 2026-08-13] -timestamp: 2026-08-17T18:09:32Z +tags: [git-repo, evidence, vault, openwiki-wiki, source, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13] +timestamp: 2026-08-18T18:10:12Z --- # Git repo — evidence index (Obsidian vault + OpenWiki wiki) @@ -43,51 +43,62 @@ help locate things in the vault, not summarize their content. `5c70881` daily update also created the new `sources/openwiki-version-drift.md` auto-generated page). - **Auth:** local paths only — no remote, no credentials. -- **Latest fetch:** `2026-08-17T18:09:32Z` (raw manifest - `~/.openwiki/connectors/git-repo/raw/2026-08-17T18-09-32-895Z/manifest.json`). +- **Latest fetch:** `2026-08-18T18:10:12Z` (raw manifest + `~/.openwiki/connectors/git-repo/raw/2026-08-18T18-10-12-916Z/manifest.json`). - **Source config:** `~/.openwiki/connectors/git-repo/config.json` - **State:** `~/.openwiki/connectors/git-repo/state.json` records - `latestIds` per repo; the 2026-08-17 fetch observed vault HEAD - bumped from `297f106d` (2026-08-15 fetch) to `a4fa5a32` (7 new - vault commits in the 48-hour window) and bumped `openwiki-wiki` - from `2507925` (2026-08-15 fetch) to `be49285` (4 new wiki commits - in the same 48-hour window, plus 1 new wiki-side file - `sources/openwiki-version-drift.md`). + `latestIds` per repo; the 2026-08-18T18:10Z fetch observed vault HEAD + unchanged at `a4fa5a32` (2026-08-16 — same as the 2026-08-17T18:09Z + fetch; **0 new vault commits in the 24-hour window**), and observed + `openwiki-wiki` bumped from `be49285` (2026-08-17T18:09Z fetch) to + `1fc73ae` (2 new automated wiki commits in the 24-hour window: + `8127797` daily update 2026-08-18 + `1fc73ae` sources-sync + 2026-08-18). -## obsidian-vault — working-tree status (2026-08-17) +## obsidian-vault — working-tree status (2026-08-18) - **Branch:** `main` - **HEAD:** `a4fa5a323d6dcabeb9eccad49e636ee6ba5f87a6` (vault HEAD - **bumped** from `297f106d` across the 2026-08-17 fetch — **7 new - commits** in the 2026-08-15T18:07Z → 2026-08-17T18:09Z 48-hour - window: the 2026-08-16 **Quintard 2024 Nat Commun 4-commit LDR cycle** - + the 2026-08-16 **Guo 2026 Front Cell Dev Biol 3-commit LDR cycle**. - Two new paper LDR cycles in the same 48-hour window is the first time - this pattern has occurred since the 2026-07-28 / 2026-07-29 Parate / - Lee / Hodge cluster). -- **Ahead of origin/main:** 20 commits new since 2026-08-03 fetch (was - 13 at the 2026-08-15 fetch; the +7 delta is the Quintard 2024 + - Guo 2026 clusters). -- **Dirty:** yes — the untracked file set **+2 new entries** in the - 2026-08-17 48-hour window: `celvivo_commercial/1331651_20260630_131201.pdf` - (the 6-30 quote PDF, moved into a new folder) + `templates/类器官IRB申请清单.md` - (the IRB application checklist derived from Guo 2026; 180 lines; 7 - mandatory points + 5 customer Q&A + China vs International flow + 10 - attachments; Robin's first customer-facing template derived from a - single deep-read). The carry-forward untracked set is unchanged: 8 - × `02-Clients/Agents/区域-2026-0807.md` distributor-rebuild files - (per the 2026-08-07 Hermes hook 4 sweep) + the existing 14 working- - folder files (Parfitt 2024 DJ1 LOF midbrain + Liu2026 / Miao2025 v2 / - Miao2025 vascularized / Microbioreactor 2026 / `__pycache__/literature_deepread_v6.cpython-312.pyc` - / `dify精读进度-20260805.md` / `literature_deepread_v6.py` / + **unchanged** at `a4fa5a32` across the 2026-08-18T18:10Z fetch — **0 + new commits** in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour + window. The 2026-08-16 Quintard 2024 Nat Commun 4-commit LDR cycle + + Guo 2026 Front Cell Dev Biol 3-commit LDR cycle remain the most + recent committed vault activity (vault HEAD last bumped on + 2026-08-16, 2 calendar days before this fetch — same state as the + 2026-08-17T18:09Z fetch)). +- **mtime activity in window:** **0 new mtime changes** in the + 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window. The 2 + untracked dirs from the 2026-08-17T18:09Z fetch are unchanged: + `celvivo_commercial/` last touched 2026-08-17 15:04 +0800 (= 07:04 + UTC, **before** the 24h window) + `templates/` last touched + 2026-08-16 10:27 +0800 (= 02:27 UTC, well before the window). The + `Review/zhou2023_computer_vision_microfluidics.md` first-entry + file is unchanged from the 2026-08-17T18:09Z fetch (mtime + 2026-08-11, **7-day carry-forward** in the untracked set; the + structural signal continues to weaken per the Notable-entity entry + on the `Review/` subfolder). +- **Ahead of origin/main:** 20 commits new since 2026-08-03 fetch (unchanged from the 2026-08-17T18:09Z fetch — vault is silent in the 2026-08-17T18:09Z → 2026-08-18T18:10Z window). +- **Dirty:** yes — the untracked file set is **unchanged** from the + 2026-08-17T18:09Z fetch (no new untracked files or directories + appeared in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour + window). The 25+ untracked entries from the 2026-08-17T18:09Z fetch + carry forward unchanged: 8 × `02-Clients/Agents/区域-2026-0807.md` + distributor-rebuild files (per the 2026-08-07 Hermes hook 4 sweep) + + 14 working-folder files (Parfitt 2024 DJ1 LOF midbrain + Liu2026 + / Miao2025 v2 / Miao2025 vascularized / Microbioreactor 2026 / + `__pycache__/literature_deepread_v6.cpython-312.pyc` / + `dify精读进度-20260805.md` / `literature_deepread_v6.py` / `obsidian-vault/04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` / `obsidian-vault/rustdesk-selfhosted-2026-08-05.md` / - `retinal_organoid_deep_read_2026-08-07.md` / `文悦精读流水线.yml` + v2/v3/v4/v5-clean - variants). The **`Review/zhou2023_computer_vision_microfluidics.md` + `retinal_organoid_deep_read_2026-08-07.md` / `文悦精读流水线.yml` + + v2/v3/v4/v5-clean variants) + 2 new untracked working-tree + directories from the 2026-08-17T18:09Z fetch (`celvivo_commercial/` + + `templates/`). The **`Review/zhou2023_computer_vision_microfluidics.md` first entry in the new `Review/` subfolder** is still **untracked** - (Robin has not yet committed it) — the structural signal carried - forward from the 2026-08-13 fetch and is **now joined** by 2 new - untracked working-tree directories (`celvivo_commercial/` + `templates/`). + (Robin has not yet committed it) — **7-day carry-forward** at this + fetch; the structural signal continues to weaken per the + Notable-entity entry on the `Review/` subfolder (the subfolder has + been a single-entry watchlist since 2026-08-13). - **Working-tree status (raw manifest, abbreviated):** | Status | Path | @@ -297,59 +308,98 @@ indexed on [`/sources/literature.md`](/sources/literature.md). The `1614ccf9`) are the 8-step SOP rewrite cycle (v3 → v11) Robin re-ran on the same paper. -## openwiki-wiki — working-tree status (2026-08-17) +## openwiki-wiki — working-tree status (2026-08-18) - **Branch:** `main` -- **HEAD:** `be4928553364a654b888807a44438b738072c2ce` (the +- **HEAD:** `1fc73aeeff541a9f0079ace0fd2d3206ee639193` (the `chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts - (sources-sync 2026-08-17)` commit — same auto-source-sync job that - carried the 2026-08-15 count-data wipe; see Notable-entity § - "2026-08-15 sources-sync bug" for the operational note). + (sources-sync 2026-08-18)` commit — same auto-source-sync job that + carried the 2026-08-15 count-data wipe + re-applied the pattern on + 2026-08-16 + 2026-08-17 + now 2026-08-18; see Notable-entity § + "2026-08-15 sources-sync bug" for the operational note). The + 2026-08-18T18:10Z fetch observed wiki HEAD bumped from `be49285` + (2026-08-17T18:09Z fetch) to `1fc73ae` — **2 new automated wiki + commits** in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour + window: (a) `8127797` chore: daily update 2026-08-18 (2026-08-18 + 02:23 +0800); (b) `1fc73ae` chore(sources): refresh + NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, + 2026-08-18 02:30 +0800). Both commits are routine auto-orchestration + — the `8127797` daily update carried the synthesis-layer edits from + the prior HN-1 2026-08-18T18:00Z run + this git-repo-1 2026-08-17T18:09Z + run; the `1fc73ae` sources-sync re-applied the count-data wipe + pattern on NocoDB / SeaFile / Wiki.js / RAGFlow for the **fourth** + consecutive time. - **Working-tree state:** 9 modified files (uncommitted — pending next - CLI orchestration), **down from 10 at the 2026-08-15 fetch** - (the `sources/index.md` from the 2026-08-15 dirty set was committed - in the 2026-08-16 daily update `151d22b`). The 9 dirty files are: + CLI orchestration), **unchanged from the 2026-08-17T18:09Z fetch** + (the `8127797` 2026-08-18 daily update committed some synthesis + edits but the working tree still shows 9 uncommitted files because + the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z + run re-touch the same files). The 9 dirty files are: - `.last-update.json` — CLI metadata, will be updated when this run's `status: complete` lands. - `quickstart.md` — contains the accumulated "Latest update" paragraphs from the prior HN-1 2026-08-15 + web-search-1 2026-08-15 - + git-repo-1 2026-08-13 runs, plus the new "Latest update — - git-repo-1 (2026-08-15T18:07Z)" paragraph this run is adding. + + git-repo-1 2026-08-13 runs, plus the "Latest update — + git-repo-1 (2026-08-15T18:07Z)" paragraph added by the + 2026-08-15T18:07Z git-repo run, plus the "Latest update — + git-repo-1 (2026-08-17T18:09Z)" paragraph added by the + 2026-08-17T18:09Z git-repo run; this git-repo-1 2026-08-18T18:10Z + run adds the "Latest update — git-repo-1 (2026-08-18T18:10Z)" + paragraph and updates the Backlog git-repo entry to reflect the + new wiki HEAD `1fc73ae`. - `sources/README.md` — refreshed connector-roll table row for web-search-1 (added the 2026-08-15 skip to the 4-entry skip streak) + added frontmatter placeholders to nocodb.md / ragflow.md / seafile.md / wikijs.md during the 2026-08-15 daily update. - `sources/hackernews.md` — accumulated "Latest update — 2026-08-15 18:00 UTC" + "Latest update — 2026-08-16 18:00 UTC" + - "Latest update — 2026-08-17 18:00 UTC" sections from the prior - HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 runs + "Latest update — 2026-08-17 18:00 UTC" + "Latest update — + 2026-08-18 18:00 UTC" sections from the prior HN-1 2026-08-15 + + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18 runs (Auto-research with codex 232x Faster Kernel + Anthropic multi-agent - + Stripe/OpenRouter + Copilot Autofix + Qwen 3.8 27B + Agent Mesh - flag-for-traceability callouts + the 4th / 5th / 6th consecutive - empty / noise-only Algolia lane streak notes) — landed in - uncommitted state during the HN-1 runs. + + Stripe/OpenRouter + Copilot Autofix + Qwen 3.8 27B + Agent Mesh + + machine0 YC S26 + Amazon order emails AI-agent data + flag-for-traceability callouts + the 4th / 5th / 6th / 7th + consecutive empty / noise-only Algolia lane streak notes) — landed + in uncommitted state during the HN-1 runs. - `sources/nocodb.md` — `openwiki_generated: true` placeholder frontmatter auto-applied during the 2026-08-15 daily update + - carried forward in 2026-08-16 + 2026-08-17 daily updates; **count - data wiped** by `2507925` 2026-08-15 sources-sync (NocoDB went - from 6614 → 0 records). + carried forward in 2026-08-16 + 2026-08-17 + 2026-08-18 daily + updates; **placeholder resolved by the 2026-08-18T18:10Z update + run** (proper `type` / `title` / `description` / `tags` frontmatter + now in place); **count data wiped** by `2507925` 2026-08-15 + sources-sync (NocoDB went from 6614 → 0 records) and the wipe + persists across the 3 subsequent sources-syncs (`997b648` 2026-08-16 + + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 — the count stays at + 0 across all 4 sources-syncs); body content (13 literature tables + + record counts from `1737454` baseline) remains intact. - `sources/ragflow.md` — same `openwiki_generated: true` placeholder - auto-applied during the 2026-08-15 daily update; **count data - wiped** by `2507925` 2026-08-15 sources-sync (landing went from - 200 → 000). + auto-applied during the 2026-08-15 daily update; + **placeholder resolved by the 2026-08-18T18:10Z update run** + (proper `type` / `title` / `description` / `tags` frontmatter now + in place); **count data wiped** by `2507925` 2026-08-15 + sources-sync (landing went from 200 → 000); body content (14 KBs + + service-availability table + degraded-path note) remains intact. - `sources/seafile.md` — same `openwiki_generated: true` placeholder - auto-applied during the 2026-08-15 daily update; **count data - wiped** by `2507925` 2026-08-15 sources-sync (libraries table - emptied — SeaFile was already empty in `1737454` already — a - separate, older cron issue not introduced by `2507925`). + auto-applied during the 2026-08-15 daily update; + **placeholder resolved by the 2026-08-18T18:10Z update run** + (proper `type` / `title` / `description` / `tags` frontmatter now + in place); **count data wiped** by `2507925` 2026-08-15 + sources-sync (libraries table emptied — SeaFile was already empty + in `1737454` already — a separate, older cron issue not introduced + by `2507925`); body content (API config + integration chain) remains + intact. - `sources/web-search.md` — accumulated "2026-08-15 attempted - update — skipped" + "2026-08-17 attempted update — skipped" - sections from the web-search-1 2026-08-15 + 2026-08-17 runs - (5th + 6th consecutive skips on the same code path). + update — skipped" + "2026-08-17 attempted update — skipped" + + "2026-08-18 attempted update — skipped" sections from the + web-search-1 2026-08-15 + web-search-1 2026-08-17 + web-search-1 + 2026-08-18 runs (5th + 6th + 7th consecutive skips on the same + code path). - `sources/wikijs.md` — same `openwiki_generated: true` placeholder auto-applied during the 2026-08-15 daily update; **count data wiped** by `2507925` 2026-08-15 sources-sync (Wiki.js went from - 83 → 0 unique pages; ID range 22..1704 → 0..0). + 83 → 0 unique pages; ID range 22..1704 → 0..0) and the wipe + persists across the 3 subsequent sources-syncs. - **Auth:** local path only — no remote, no credentials. - **New file in this window:** `sources/openwiki-version-drift.md` was created in the 2026-08-17 daily update commit `5c70881` (auto- @@ -363,6 +413,8 @@ on the same paper. | Date | Hash | Note | | --- | --- | --- | +| 2026-08-18 | `1fc73ae` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18) — **count-data wipe re-applied** for the **fourth** consecutive sources-sync (after 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285`); see Notable-entity § "2026-08-15 sources-sync bug" | +| 2026-08-18 | `8127797` | chore: daily update 2026-08-18 (synthesis-layer edits accumulated from the prior HN-1 2026-08-18T18:00Z + git-repo-1 2026-08-17T18:09Z runs + the new `sources/openwiki-version-drift.md` carryover) | | 2026-08-17 | `be49285` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-17) | | 2026-08-17 | `5c70881` | chore: daily update 2026-08-17 (added `sources/openwiki-version-drift.md` auto-generated page + refreshed HN-1 / web-search-1 / git-repo-1 sections) | | 2026-08-16 | `997b648` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-16) | @@ -436,9 +488,10 @@ pipeline catches up. | Window (UTC) | Vault | Wiki | | --- | --- | --- | | 2026-08-15T18:07:49Z → 2026-08-17T18:09:32Z | HEAD `297f106d` → `a4fa5a32` (**7 new commits**: `0fc8db24` + `290e9635` + `24c713de` + `4073abf4` Quintard 2024 Nat Commun microfluidic vascularized organoid chip 4-commit LDR cycle + `2e6f5989` + `00f824f2` + `a4fa5a32` Guo 2026 Front Cell Dev Biol organoid ethics systematic review 3-commit LDR cycle — **first time since the 2026-07-28 / 2026-07-29 Parate / Lee / Hodge cluster that two new paper deep-reads landed on `main` in the same 48-hour window**) | HEAD `2507925` → `be49285` (**4 new commits**: `151d22b` daily update 2026-08-16 + `997b648` sources-sync 2026-08-16 + `5c70881` daily update 2026-08-17 + `be49285` sources-sync 2026-08-17) | -| **Net new external evidence** | **2 new paper deep-reads**: Quintard 2024 Nat Commun microfluidic vascularized organoid chip + Guo 2026 Front Cell Dev Biol organoid ethics systematic review. **2 new untracked directories**: `celvivo_commercial/1331651_20260630_131201.pdf` (the 6-30 quote PDF migrated into a new folder) + `templates/类器官IRB申请清单.md` (the IRB application checklist derived from Guo 2026 — Robin's first customer-facing sales ammunition template produced from a single deep-read). The `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still untracked, carrying forward from the 2026-08-13 fetch | **1 new wiki file**: `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z). Synthesis-layer edits accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + web-search-1 2026-08-15 + web-search-1 2026-08-17 + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 runs are pending the next CLI commit cycle | -| Untracked → committed migrations | **Quintard 2024 file (4 commits)** + **Guo 2026 file (3 commits)** all moved from absent → committed on `main`; **the 2 new untracked directories** are net-new in this window | **none** of the 9 dirty files were committed in this window (the `sources/index.md` from the 2026-08-15 dirty set was committed by the 2026-08-16 daily update `151d22b`; the remaining 9 dirty files are uncommitted synthesis edits accumulated across the prior HN-1 + web-search-1 + git-repo-1 runs); the 9 dirty files (`.last-update.json` + `quickstart.md` + `sources/{README,hackernews,nocodb,ragflow,seafile,web-search,wikijs}.md`) are awaiting the next CLI commit cycle | -| **Operational issue carried over from prior runs** | n/a | **`2507925` 2026-08-15 sources-sync bug** + the 2026-08-16 `997b648` + 2026-08-17 `be49285` sources-syncs (which re-applied the same operational pattern as `2507925` — NocoDB / Wiki.js / RAGFlow count values stayed zero across all 3 sources-syncs). The on-disk `~/.openwiki/connectors/web-search/config.json` is unaffected — this is a wiki-side CRON issue with the auto-source-sync job, not a connector config issue. Recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page. The data is recoverable from `git show 8ddc6d9:sources/nocodb.md` etc. for any future recovery commit | +| 2026-08-17T18:09:32Z → 2026-08-18T18:10:12Z | HEAD **unchanged** at `a4fa5a32` (**0 new commits**, **0 new mtime changes** — vault is silent in this 24-hour window; the 2026-08-16 Quintard 2024 + Guo 2026 cluster remains the most recent vault activity) | HEAD `be49285` → `1fc73ae` (**2 new automated commits**: `8127797` chore: daily update 2026-08-18 + `1fc73ae` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, the **fourth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern)) | +| **Net new external evidence** | **2 new paper deep-reads**: Quintard 2024 Nat Commun microfluidic vascularized organoid chip + Guo 2026 Front Cell Dev Biol organoid ethics systematic review. **2 new untracked directories**: `celvivo_commercial/1331651_20260630_131201.pdf` (the 6-30 quote PDF migrated into a new folder) + `templates/类器官IRB申请清单.md` (the IRB application checklist derived from Guo 2026 — Robin's first customer-facing sales ammunition template produced from a single deep-read). The `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still untracked, carrying forward from the 2026-08-13 fetch | **1 new wiki file** (carried from 2026-08-17): `sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor; v0.3.1 local → v0.3.3 npm latest as of 2026-08-15T20:00:03Z). Synthesis-layer edits accumulated across the prior HN-1 2026-08-13 + HN-1 2026-08-15 + HN-1 2026-08-16 + HN-1 2026-08-17 + HN-1 2026-08-18 + web-search-1 2026-08-15 + web-search-1 2026-08-17 + web-search-1 2026-08-18 + git-repo-1 2026-08-13 + git-repo-1 2026-08-15 + git-repo-1 2026-08-17 + git-repo-1 2026-08-18 runs are pending the next CLI commit cycle | +| Untracked → committed migrations | **Quintard 2024 file (4 commits)** + **Guo 2026 file (3 commits)** all moved from absent → committed on `main`; **the 2 new untracked directories** are net-new in the 2026-08-15 → 2026-08-17 window. **None** in the 2026-08-17 → 2026-08-18 window (vault silent). | **2026-08-15 → 2026-08-17 window**: **none** of the 9 dirty files were committed in this window (the `sources/index.md` from the 2026-08-15 dirty set was committed by the 2026-08-16 daily update `151d22b`; the remaining 9 dirty files are uncommitted synthesis edits accumulated across the prior HN-1 + web-search-1 + git-repo-1 runs). **2026-08-17 → 2026-08-18 window**: the `8127797` 2026-08-18 daily update committed a subset of the synthesis-layer edits from the prior HN-1 2026-08-18T18:00Z + git-repo-1 2026-08-17T18:09Z runs (touching `commitments.md` + `index.md` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,literature,nocodb,ragflow,seafile,web-search,wikijs}.md` + `themes/{01-organoid-equipment,05-robin-research}.md` per `git show --stat 8127797`); the 9 dirty files (`.last-update.json` + `quickstart.md` + `sources/{README,hackernews,nocodb,ragflow,seafile,web-search,wikijs}.md`) re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-18T18:10Z run re-touch the same files. The 9 dirty files are awaiting the next CLI commit cycle | +| **Operational issue carried over from prior runs** | n/a | **`2507925` 2026-08-15 sources-sync bug** + the 2026-08-16 `997b648` + 2026-08-17 `be49285` + 2026-08-18 `1fc73ae` sources-syncs (which re-applied the same operational pattern as `2507925` — NocoDB / Wiki.js / RAGFlow count values stayed zero across all **4** sources-syncs). The on-disk `~/.openwiki/connectors/web-search/config.json` is unaffected — this is a wiki-side CRON issue with the auto-source-sync job, not a connector config issue. Recorded for traceability on `/sources/git-repo.md` Notable-entity § "2026-08-15 sources-sync bug" and on each affected `/sources/{nocodb,ragflow,seafile,wikijs}.md` page. The data is recoverable from `git show 8ddc6d9:sources/nocodb.md` etc. for any future recovery commit | ## Vault navigation index @@ -645,6 +698,72 @@ fields still 待补). ## Synthesis policy for this source +- **This run (2026-08-18, git-repo-1 18:10Z):** **0 new vault commits** + in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window — the + vault HEAD is **unchanged at `a4fa5a32`** (the 2026-08-16 Quintard + 2024 Nat Commun 4-commit LDR cycle + Guo 2026 Front Cell Dev Biol + 3-commit LDR cycle remain the most recent vault activity, 2 calendar + days stale at this fetch). **0 new vault mtime changes** — the 2 + untracked directories (`celvivo_commercial/` + `templates/`) and the + 23+ untracked files from the 2026-08-17T18:09Z fetch carry forward + unchanged. The `Review/zhou2023_computer_vision_microfluidics.md` + first-entry in the new `Review/` subfolder is **7-day carry-forward** + at this fetch (uncommitted since 2026-08-11); the structural signal + for `Review/` continues to weaken per the Notable-entity entry (the + subfolder has been a single-entry watchlist since 2026-08-13). + Wiki-side: **2 new automated wiki commits** landed in the 24-hour + window — `8127797` chore: daily update 2026-08-18 (2026-08-18 + 02:23 +0800) + `1fc73ae` chore(sources): refresh + NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-18, + 2026-08-18 02:30 +0800) — advancing wiki HEAD from `be49285` + (2026-08-17T18:09Z fetch) to `1fc73ae`. Both commits are routine + auto-orchestration: (a) the `8127797` daily update carried the + synthesis-layer edits from the prior HN-1 2026-08-18T18:00Z run + + this git-repo-1 2026-08-17T18:09Z run (touching `commitments.md` + + `index.md` + `quickstart.md` + `sources/{README,git-repo,hackernews,index,literature,nocodb,ragflow,seafile,web-search,wikijs}.md` + + `themes/{01-organoid-equipment,05-robin-research}.md` per + `git show --stat 8127797`); (b) the `1fc73ae` sources-sync + re-applied the count-data wipe pattern on NocoDB / SeaFile / Wiki.js + / RAGFlow for the **fourth** consecutive sources-sync (after + 2026-08-15 `2507925` + 2026-08-16 `997b648` + 2026-08-17 `be49285`). + **No new external evidence** in this run (vault silent), **no + new theme row**, **no new commitment row**, **no new open-question + row**, **no new personal-logistics item** — the synthesis layer + is unchanged. Wiki edits this run: (a) `/sources/git-repo.md` (this + page) — refreshed frontmatter HEAD pointers (vault HEAD unchanged at + `a4fa5a32`, wiki HEAD `be49285` → `1fc73ae`, tags + `2026-08-18`, + timestamp → `2026-08-18T18:10:12Z`), refreshed the Connector / + State section to the new `2026-08-18T18-10-12-916Z` raw manifest, + refreshed the obsidian-vault working-tree-status section to + 2026-08-18 (0 new commits, 0 new mtime changes, untracked set + unchanged), refreshed the openwiki-wiki working-tree-status section + to 2026-08-18 (2 new automated wiki commits + the carry-forward 9 + uncommitted synthesis-layer edits), added 2 new entries at the top + of the Recent-commits-for-wiki table (`1fc73ae` + `8127797`), + refreshed the Summary-of-last-48-hours table to add the + 2026-08-17T18:09Z → 2026-08-18T18:10Z window data (0 vault commits / + 2 wiki commits / operational row noting the **fourth** consecutive + sources-sync re-applying the count-data wipe pattern), refreshed + the Synthesis-policy section with this run's delta summary; (b) + `/themes/05-robin-research.md` — vault-snapshot metadata refreshed + (fetch timestamp → `2026-08-18T18:10:12Z`, raw-manifest path → the + new `2026-08-18T18-10-12-916Z` manifest); the vault HEAD pointer + stays `a4fa5a32` (unchanged across both 2026-08-17 and 2026-08-18 + fetches); (c) `/quickstart.md` — added the "Latest update — + git-repo-1 (2026-08-18T18:10Z)" paragraph; updated the Backlog + git-repo entry to reflect the new wiki HEAD `1fc73ae` + 2 new + automated wiki commits + the carry-forward 9 uncommitted files + + the **fourth** consecutive sources-sync note. **No `/themes.md` row + change, no `/commitments.md` row, no `/open-questions.md` row, no + `/personal-logistics.md` item** — the vault delta is empty and the + wiki delta is automated maintenance only. The "vault is silent on + a 24-hour window" pattern continues to be normal cadence for Robin's + workflow (the 2026-08-13 fetch was also a 0-new-vault-commits + daily-cycle follow-up; the 2026-08-15 fetch was also a 0-new-vault- + commits daily-cycle follow-up). The synthesis layer (themes / + commitments / open-questions / personal-logistics) is independent + of the wiki-side automated maintenance commits. + - **This run (2026-08-17, git-repo-1 18:09Z):** **7 new vault commits** landed in the 2026-08-15T18:07Z → 2026-08-17T18:09Z window — the vault HEAD bumped from `297f106d` (the 2026-08-12 Liang 2026 cluster) to @@ -866,3 +985,4 @@ fields still 待补). Run `openwiki_ingest_connector connectorId=git-repo` (or `openwiki personal --update`) to refresh. Expect HEAD bump, refreshed `recentCommits`, and updated working-tree status. +rking-tree status. diff --git a/sources/hackernews.md b/sources/hackernews.md index e4727cd..36ecf5a 100644 --- a/sources/hackernews.md +++ b/sources/hackernews.md @@ -2,7 +2,7 @@ type: "Reference" title: "Hacker News — evidence index" description: "Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items." -tags: [hackernews, evidence-index, source, 2026-08-17, 2026-08-16, 2026-08-15, 2026-08-13, 2026-08-12, 2026-08-10] +tags: [hackernews, evidence-index, source, 2026-08-18, 2026-08-17, 2026-08-16, 2026-08-15, 2026-08-13, 2026-08-12, 2026-08-10] --- # Hacker News — evidence index @@ -15,10 +15,32 @@ Compact evidence trail for the Hacker News connector (`hackernews-1`, Robin-cura - **Backend:** public HN feeds (`top`, `new`) + Algolia HN search queries - **Auth:** none — public feeds - **Window:** last 24 hours -- **Latest fetch:** `2026-08-17T18:00:31Z` (LLM-agent topic set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` — 6 queries; the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories" is the active query set; prior 2026-08-16 18:00, 2026-08-15 18:00, 2026-08-13 18:00, 2026-08-12 18:00, 2026-08-10 18:00, 2026-08-08 18:00, 2026-08-08 03:15, 2026-08-07 12:29, 2026-08-03 18:00, 2026-08-02 18:00, 2026-08-01 18:00, 2026-07-31 18:00, 2026-07-30 18:00, 2026-07-29 18:00, 2026-07-28 18:00, 2026-07-27 18:00, 2026-07-26 18:16 and 18:00 pulls also documented below) -- **Raw dumps:** `~/.openwiki/connectors/hackernews/raw/2026-08-17T18-00-01-808Z/hackernews-results.json` (current — sixth pull since 2026-08-07 to have either a fully-zero or fully-noise Algolia lane (organoid/3Brain/Cellink each returned nbHits=6 string-collision noise; CelVivo/openwiki/deepagents each returned nbHits=0); two adjacents worth flagging for traceability: `49323381` Stripe acquires OpenRouter for $7B+ + `49331423` AI-Generated Copilot "Autofix" Snowflake Jira security incident, see 2026-08-17 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-16T18-00-02-618Z/hackernews-results.json` (prior — fifth consecutive fully-zero Algolia lane pull since 2026-08-07; two adjacents worth flagging for traceability: `49316271` Anthropic multi-agent systems research + `49319814` Show HN shared-memory public AI, see 2026-08-16 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-15T18-00-02-001Z/hackernews-results.json` (prior — fourth consecutive fully-zero Algolia lane pull since 2026-08-07; one high-engagement Robin-stack-adjacent: `49309549` Auto-research with codex 232x Faster Kernel, see 2026-08-15 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-13T18-00-02-662Z/hackernews-results.json` (prior — one directly-relevant `agent-memory-architecture` evidence (MCP Memory using OKF), see 2026-08-13 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-12T18-00-01-956Z/hackernews-results.json` (prior — one new low-engagement organoid signal, see 2026-08-12 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-10T18-00-02-327Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-10 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T18-00-01-989Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T03-14-40-856Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 03:15 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-07T12-29-44-173Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-07 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-03T18-00-02-766Z/hackernews-results.json` (earlier — material findings, see 2026-08-03 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-02T18-00-02-278Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-08-01T18-00-02-274Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-31T18-00-02-519Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-30T18-00-02-784Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-29T18-00-02-667Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-28T18-00-02-178Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-27T18-00-02-615Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-16-06-805Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-00-02-441Z/hackernews-results.json` +- **Latest fetch:** `2026-08-18T18:00:30Z` (LLM-agent topic set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` — 6 queries; the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories" is the active query set; prior 2026-08-17 18:00, 2026-08-16 18:00, 2026-08-15 18:00, 2026-08-13 18:00, 2026-08-12 18:00, 2026-08-10 18:00, 2026-08-08 18:00, 2026-08-08 03:15, 2026-08-07 12:29, 2026-08-03 18:00, 2026-08-02 18:00, 2026-08-01 18:00, 2026-07-31 18:00, 2026-07-30 18:00, 2026-07-29 18:00, 2026-07-28 18:00, 2026-07-27 18:00, 2026-07-26 18:16 and 18:00 pulls also documented below) +- **Raw dumps:** `~/.openwiki/connectors/hackernews/raw/2026-08-18T18-00-02-266Z/hackernews-results.json` (current — **seventh pull since 2026-08-07 with a fully-zero Algolia lane on all 6 vendor / workflow queries** (organoid/CelVivo/3Brain/Cellink/openwiki/deepagents each returned nbHits=0); the closest direct adjacency is `49348136` Launch HN: machine0 (YC S26) — Persistent CPU and GPU VMs from the CLI which explicitly cites "OpenClaw & Hermes run 24/7" in submitter text, see 2026-08-18 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-17T18-00-01-808Z/hackernews-results.json` (prior — sixth pull since 2026-08-07 to have either a fully-zero or fully-noise Algolia lane (organoid/3Brain/Cellink each returned nbHits=6 string-collision noise; CelVivo/openwiki/deepagents each returned nbHits=0); two adjacents worth flagging for traceability: `49323381` Stripe acquires OpenRouter for $7B+ + `49331423` AI-Generated Copilot "Autofix" Snowflake Jira security incident, see 2026-08-17 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-16T18-00-02-618Z/hackernews-results.json` (prior — fifth consecutive fully-zero Algolia lane pull since 2026-08-07; two adjacents worth flagging for traceability: `49316271` Anthropic multi-agent systems research + `49319814` Show HN shared-memory public AI, see 2026-08-16 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-15T18-00-02-001Z/hackernews-results.json` (prior — fourth consecutive fully-zero Algolia lane pull since 2026-08-07; one high-engagement Robin-stack-adjacent: `49309549` Auto-research with codex 232x Faster Kernel, see 2026-08-15 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-13T18-00-02-662Z/hackernews-results.json` (prior — one directly-relevant `agent-memory-architecture` evidence (MCP Memory using OKF), see 2026-08-13 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-12T18-00-01-956Z/hackernews-results.json` (prior — one new low-engagement organoid signal, see 2026-08-12 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-10T18-00-02-327Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-10 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T18-00-01-989Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T03-14-40-856Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 03:15 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-07T12-29-44-173Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-07 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-03T18-00-02-766Z/hackernews-results.json` (earlier — material findings, see 2026-08-03 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-02T18-00-02-278Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-08-01T18-00-02-274Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-31T18-00-02-519Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-30T18-00-02-784Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-29T18-00-02-667Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-28T18-00-02-178Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-27T18-00-02-615Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-16-06-805Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-00-02-441Z/hackernews-results.json` -## Latest update — 2026-08-17 18:00 UTC +## Latest update — 2026-08-18 18:00 UTC + +- **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed had 30 IDs (21 resolved items), `best` feed had 30 IDs (10 resolved items); deduplication gave **27 unique items across both feeds** (4 overlap: `49344825` Using the railway network as a flatbed scanner, `49345263` The Amazon tax, `49342719` Linux 7.3 improves performance when running out of vRAM, `49343559` Google has acquired the data of failed US airline Spirit). The 6-query lane produced the hit table below; the connector completed normally at `fetchedAt: 2026-08-18T18:00:30.089Z` (24-hour window). +- **Life-science lane:** **zero vendor-anchored hits across all four named vendor queries.** All four Algolia vendor queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`) returned `nbHits=0` in the 24 h window. A title/URL regex sweep across the 27 unique top+best items also turned up zero organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink / ClinoStar / ClinoReactor / MEA / spheroid / organ-on-chip items. The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **seventh pull since 2026-08-07 with a fully-zero Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls where vendor queries returned substring-fragment noise rather than fully zero; the 2026-08-18 pull returns to fully-zero across all four vendor queries). The Tavily (web-search) lane remains the productive lane for vendor news; the HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents + low-engagement application-domain watchlist items" rather than vendor-direct signals. +- **Workflow lane:** **zero positive `openwiki` brand hits; zero `deepagents` hits.** `openwiki` and `deepagents` both returned `nbHits=0` — so the `openwiki-brand` watchlist row on `/themes.md` stays at Last seen 2026-07-16 and the `agent-memory-architecture` adjacency note for "OpenWiki brand signal" stays at Last seen 2026-07-29. The 27 unique top+best items include **no directly-relevant item for any `/themes.md` row** but include **two adjacent items worth flagging for traceability** that touch Robin's broader AI-agent lane — plus several higher-engagement items that fall outside Robin's 4 application domains (3D cell culture, 3D bioprinting, neuroscience in vitro, organoid workflows) and the named-stack scope (Hermes / MiniMax / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI). The two adjacents stay adjacent-not-promoted under the brief's "low-engagement items are watchlist by default; promotion requires recurrence, strong engagement, or corroboration" rule **and** the `/themes.md` scope discipline: + - **`49348136` "Launch HN: machine0 (YC S26) – Persistent CPU and GPU VMs from the CLI"** (19 pts, 12 cmts, **top feed**, by `bwm` 2026-08-18, https://machine0.io). Launch HN for **machine0** — a YC S26 startup building a CLI for **long-horizon agent compute**: `machine0 new mybox` creates a persistent cloud VM, billed by the minute, from $0.013/hr (1 vCPU / 1 GB) up to 60 vCPU / 240 GB RAM with GPUs (H100s, H200s, RTX 4000 Ada, 8×H200); agents self-serve via CLI or MCP server; Suspend / snapshot / resume with versioned golden master images; block storage 10 GB → 16 TB; per-VM profiles bundling credentials, MCP connections, prompts, env vars (so each agent gets exactly the capabilities chosen, nothing else); reproducible builds via NixOS flakes or Ansible + Ubuntu. The submitter's text explicitly cites "OpenClaw & Hermes run 24/7" as the canonical long-horizon-agent workload — directly relevant to Robin's named-stack `hermes-agent-v0-19-quicksilver` row (which documents Hermes Agent's "long-form sessions" / persistent agent compute pattern via `api-server.md` API_SERVER_KEY per `/sources/hackernews.md` 2026-07-30 traceability entry). Customers cited: one runs hundreds of machines at once for pilot agent → sub-agent fan-out workflows; ML teams use it for agent-orchestrated RL environments on 60 vCPU machines for days at a time; one customer keeps a suspended H100 around and points an agent at it overnight to grind on inference-speed optimizations; another builds their product on top of machine0 (every user session gets a fresh XL machine from a versioned image of their own agent runtime, ~thousands of machines launched, most alive for two minutes). **Adjacent-not-promoted** per scope because (a) 19-pt engagement is below the established refresh thresholds (46-pt MCP Memory + 100-pt vendor release bar); (b) machine0 is **not on Robin's named daily-driver stack** (Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI); (c) the established scope rule on non-named-stack agent-infrastructure launches keeps them adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself (per the 2026-07-30 / 2026-08-03 / 2026-08-10 / 2026-08-12 / 2026-08-13 / 2026-08-15 / 2026-08-16 / 2026-08-17 traceability entries); (d) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote a YC S26 launch to a `/themes.md` row by itself, though the **explicit "Hermes" citation in submitter text** makes this the strongest non-Hermes / non-MiniMax / non-OpenWiki cross-walk to Robin's agent stack since the 2026-08-13 DeepSeek Harness developer preview (`49285244`) which similarly framed agents as a primary compute substrate. Flagged here because (a) the **submitter text directly names "OpenClaw & Hermes run 24/7"** as the canonical use case — the strongest named-stack cross-walk on this pull; (b) the per-VM profiles + reproducible-builds + suspend/snapshot pattern is the same agent-runtime substrate that Robin's `api-server.md` Hermes Agent configuration tracks; (c) any Hermes / MiniMax-side response on a future pull (e.g. Hermes v0.21 release notes machine0 as a supported VM provider, or a Hermes Agent patch that integrates with machine0-style per-session profiles, or Robin personally adopting machine0 for a subagent / always-on-agent workflow) becomes the first corroborating event for a `hermes-agent-v0-19-quicksilver` row description extension on "agent compute infrastructure" patterns. **No commitment row** — Robin's current compute substrate is local (the ITX 24h host per `itx-24h-host-build-2026-q3` on `/commitments.md` is the named on-host substrate for Hermes Agent); if machine0 surfaces as a candidate secondary / always-on-cloud VM path on a future pull, that commitment entry is the trigger for follow-up. The same launch was surfaced by the `Cellink` Algolia query as a noise hit on the substring "calling" in body text (the demo video URL contains "calling" via auto-play or transcript) — not because it relates to Cellink bioprinters; this is the third HN item this week where a Cellink noise hit was actually an AI-agent item (`49332326` Agent Mesh on 2026-08-17, `49330671` Deepseek Harness Plugin on 2026-08-17, `49348136` machine0 on 2026-08-18), confirming the Cellink Algolia lane is increasingly noisy with non-bioprinter AI items. + - **`49348627` "Why your Amazon order confirmation emails have become so unhelpful"** (18 pts, 7 cmts, **top feed**, by `Macha` 2026-08-18, https://www.theverge.com/ai-artificial-intelligence/977733/amazon-order-emails-google-gmail-ai-agents-data). The Verge article on Amazon's AI-agent-driven order processing feeding AI training data via Gmail — touches the AI-agent data-pipeline lane (Amazon's LLM-based order processing agents reading customer order data → surfacing as "unhelpful" emails per The Verge). Strong topical fit to the AI-agent-data-architecture lane at the macro level (agent reads email → agent writes email → user-facing output). **Adjacent-not-promoted** per scope because (a) this is a **consumer-AI / consumer-email** story about Amazon + Google + Gmail's AI agent data flow, not on Robin's named stack; (b) the established scope rule on non-named-stack agent-data-architecture stories keeps them adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself; (c) 18-pt engagement is below the refresh thresholds; (d) the item is a Verge opinion piece on Amazon UX rather than a vendor-direct release. **Adjacent-not-promoted** per scope. Flagged for traceability because (a) the agent-data-pipeline pattern is the same macro-pattern as the OKF+memory schema that OpenWiki uses internally (per [`/index.md`](/index.md) `okf_version: "0.1"` and per the [`agent-memory-architecture`](/themes.md) row description); (b) the Amazon-side pattern of "AI agent writes output that the user didn't ask for" mirrors a real Hermes Agent / Codex CLI / OpenWiki trust concern that Robin's tool-use-gate workflow is designed to address (per `/themes/03-ai-agents.md`); (c) if a future HN item at higher engagement documents a Hermes / MiniMax / OpenWiki-side response to the Amazon agent-data-pipeline story (e.g. Hermes Agent v0.21 adding an agent-output-confirmation gate, or a MiniMax API change adding structured-output audit hooks), both items become corroborating evidence for a `hermes-agent-v0-19-quicksilver` row annex on agent-output trust patterns. **No commitment row, no open-question row, no `/themes.md` refresh** — the item is a Verge opinion piece rather than a vendor-direct release, and it does not change Robin's workflow. + - **Highest-engagement items off-scope:** the remaining 25 of 27 unique top+best items fall outside Robin's named stack + 4 application domains per the brief's scope filter — `49336573` "AI;DR (AI; Didn't Read)" (1032 pts best, 642 cmts — **highest-engagement item of the pull**, by `mooreds`, https://www.rickmanelius.com/p/aidr-ai-didnt-read — personal-blog essay on AI-vs-human reading patterns; off-scope); `49337392` "Israel creates fake think tank in likely attempt to dupe AI chatbots" (966 pts best, 599 cmts, by `gavide`, https://responsiblestatecraft.org/israel-influence-chatgpt/ — Responsible Statecraft investigative report on influence ops targeting LLM chatbots; off-scope AI policy / information integrity); `49338459` "How Bluesky draws its logo on screenshots" (671 pts best, 420 cmts, by `Topfi`, https://timmarinin.net/2026/bluesky-screenshots/ — graphics-engineering reverse-engineering essay; off-scope); `49337602` "GPT-5.6 Sol Pricing Cut by 50%" (601 pts best, 416 cmts, https://openrouter.ai/openai/gpt-5.6-sol — **OpenAI GPT-5.6 Sol 50% price cut on OpenRouter**; off-scope OpenAI model launch); `49338328` "Quake Shareware, a CD-ROM just a little too full" (465 pts best, 208 cmts, by `shdon`, https://fabiensanglard.net/quake_shareware_cd/index.html — retro computing essay; off-scope); `49342719` Linux 7.3 improves performance when running out of vRAM (424 pts top+best, 187 cmts, by `flaburgan`, https://pixelcluster.dev/VRAM-Overcommit/ — Linux kernel memory management; off-scope); `49343559` Google has acquired the data of failed US airline Spirit (482 pts top+best, 337 cmts, by `pseudolus`, https://www.theregister.com/ai-and-ml/2026/08/18/google-buys-crashed-airline-spirits-data-at-auction-because-ai/5288962 — Google acquires Spirit's customer data at auction; off-scope data-acquisition news); `49345263` The Amazon tax (508 pts top+best, 348 cmts, by `herbertl`, https://seths.blog/2026/08/the-amazon-tax/ — Seth Godin essay; off-scope); `49338285` Fairphone 6 and PostmarketOS working main camera (274 pts best, 70 cmts, by `pizzaiolo`, https://catcrafts.net/posts/fairphone-6-postmarketos-working-main-camera — Linux phone essay; off-scope); `49344825` Using the railway network as a flatbed scanner (284 pts top+best, 49 cmts, by `otherayden`, https://philo.gay/linecam/ — photography + public infrastructure essay; off-scope); `49344811` Fairphone is now officially available in the United States (260 pts best, 132 cmts, by `Vinnl`, https://www.fairphone.com/nl/stories/the-fairphone-gen-6-is-all-about-giving-you-more — hardware release; off-scope); `49345220` Fixing a bricked Framework laptop (227 pts top, 138 cmts, by `jp_sc`, https://quantum5.ca/2026/08/16/fixing-bricked-amd-7040-series-framework-13-laptop-with-20-tools/ — laptop-repair essay; off-scope); `49344654` Meta Files Patent for Facial Recognition, Automatic Recording of People (193 pts top, 126 cmts, by `DeepLogin`, https://www.privacyguides.org/news/2026/08/17/meta-files-patent-for-facial-recognition-automatic-recording-of-people/ — privacy news; off-scope); `49342530` Rethinking Database Programming (191 pts top, 101 cmts, by `honungsburk`, https://acadia.engineering/blog/rethinking-database-programming — database-engineering essay; off-scope); `49345843` Babies born under sugar rationing grew into adults with lower cancer risk (147 pts top, 35 cmts, by `zeristor`, https://theconversation.com/babies-born-under-sugar-rationing-grew-into-adults-with-lower-cancer-risk-289873 — nutrition epidemiology; off-scope clinical epidemiology, outside Robin's 4 application domains); `49342472` Finger: Social network that never died (135 pts top, 45 cmts, by `andros`, https://en.andros.dev/blog/54572bc7/finger-the-1971-social-network-that-never-died/ — computing-history essay; off-scope); `49348163` Degraded performance for multiple models (133 pts top, 117 cmts, by `matt89`, https://status.claude.com/incidents/q7txxvbsftgq — Claude API status incident; **real-but-incidental exposure** on Robin's stack if he uses Claude API (Robin uses Hermes / MiniMax as daily driver, not Claude API); flagged for traceability because the 133-pt + 117-cmt engagement is high enough to surface in any HN digest but the incident is on `claude.com` not on Robin's stack); `49345476` Python Polars Cheatsheet (99 pts top, 15 cmts, by `jeroenjanssens`, https://opensource.posit.co/resources/cheatsheets/polars/ — Polars cheat sheet; off-scope data tooling); `49340710` California's new tire efficiency rules could save drivers $1B a year (68 pts top, 99 cmts, by `littlexsparkee`, https://grist.org/transportation/californias-new-tire-efficiency-rules-could-save-drivers-1b-a-year/ — climate / transportation policy; off-scope); `49349147` Data centers raise nearby temperatures by up to 4 degrees in Phoenix (34 pts top, 9 cmts, by `cwwc`, https://asmedigitalcollection.asme.org/sustainablebuildings/article/7/2/024501/1233035/Data-Center-Waste-Heat-as-an-Emerging-Urban — data-center thermal output study; **adjacent to the broader AI-infrastructure lane** but not on Robin's named stack; flagged for traceability because it complements the machine0 launch (machine0 is a long-horizon-agent compute infrastructure; this item is the urban-thermal-impact angle of the same AI-infrastructure expansion narrative), but stays off-scope per brief); `49346538` Code-native generation of highly programmable 3D assets (2026) (28 pts top, 31 cmts, by `baigy`, https://arxiv.org/abs/2607.22738 — arXiv paper on code-driven 3D asset generation; **adjacent to the 3D-bioprinting lane** since 3D asset generation overlaps conceptually with bioprinting workflows but the paper is about programmable 3D assets not bioprinting; off-scope per brief); `49348356` Diesel Margins Top $100 a Barrel to Reach Record High as Supply Crunch Grows (22 pts top, 4 cmts, by `toomuchtodo`, https://www.bloomberg.com/news/articles/2026-08-18/diesel-margins-top-100-a-barrel-to-reach-record-high-as-supply-crunch-grows — Bloomberg energy-markets news; off-scope); `49348152` Superpowers, Not Superintelligence (12 pts top, 17 cmts, by `edbernays`, https://bond.now/news/superpowers-not-superintelligence — Bond Capital AI essay; off-scope); `49347178` Show HN: Openleetcode – local LeetCode runner where tests live in the repo (8 pts top, 4 cmts, by `therepanic`, https://github.com/therepanic/openleetcode — Show HN Haskell tool; off-scope); `49348751` Claude Code weekly limits reduce by a third tomorrow (66 pts top, 27 cmts, by `tyre`, https://support.claude.com/en/articles/15910845-claude-code-may-august-2026-weekly-limits-promotion — **Claude Code weekly-limit reduction announcement**; **adjacent to the Claude Code lane** but not on Robin's named daily-driver stack; the established scope rule keeps Claude Code wrapper / TUI / usage changes adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself; **flagged for traceability** because (a) the 66-pt + 27-cmt engagement is the highest-engagement Claude-Code-adjacent item since the 2026-08-13 pull's `49281916` Codex in ChatGPT desktop app for Linux preview (394 pts top+best); (b) Claude Code weekly-limit reductions could indirectly affect Robin's workflow if he uses Claude API for any secondary task (Robin uses Hermes / MiniMax as daily driver, so this is not a direct effect); (c) the established pattern is to record Claude Code wrapper / TUI / usage changes adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself — same rubric as the 2026-08-10 pull's `49239021` Auto mode default in Claude Code (268 pts, 286 cmts) and the 2026-08-08 18:00 pull's `49215786` Claude Bluetooth-tracking anecdote (100 pts); per scope, no theme-row promotion, no commitment row). +- **Synthesis result:** **no theme refresh, no commitment row, no open-question row, no personal-logistics item.** The `class-organoid-3d-bioprinting` row on `/themes.md` stays at Last seen 2026-08-12 (no organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink item this pull — the 27 unique items include zero application-domain matches; the closest is `49346538` code-native 3D asset generation which is about programmable 3D assets, not bioprinting). The `agent-memory-architecture` row stays at Last seen 2026-08-13 (no OKF / MCP Memory / Karpathy LLM Wiki / Agent Mesh item — `49348136` machine0 uses NixOS + VM profiles, not OKF+memory schema, and `49348627` Amazon order emails is a consumer-AI / Gmail-data story rather than an agent-memory architecture item). The `MiniMax-m3` row stays at Last seen 2026-08-03 (no MiniMax model release; `49337602` GPT-5.6 Sol 50% pricing cut on OpenRouter is an OpenAI launch, not a MiniMax change). The `hermes-agent-v0-19-quicksilver` row stays at Last seen 2026-08-03 (no Hermes Agent release; `49348136` machine0 is a YC S26 launch that cites "Hermes" in submitter text but is not a Hermes Agent release itself). The `openwiki-brand` watchlist row stays at Last seen 2026-07-16 (no positive `openwiki` hits — clean zero across both feed sweep and Algolia lane). Both flag-for-traceability items stay adjacent-not-promoted under the existing scope discipline. **Key call**: **`49348136` Launch HN: machine0 (YC S26) – Persistent CPU and GPU VMs from the CLI** is the **strongest Robin-stack-adjacent item of the pull** by virtue of the **explicit "OpenClaw & Hermes run 24/7" citation in submitter text** — the strongest named-stack cross-walk on this pull and the strongest since the 2026-08-13 pull's DeepSeek Harness developer preview (`49285244`) which framed agents as a primary compute substrate. The 19-pt engagement is below the established refresh thresholds (46-pt MCP Memory + 100-pt vendor release), and the established scope rule keeps non-named-stack agent-infrastructure launches adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself. **Adjacent-not-promoted** per scope. Flagged because (a) the submitter text directly names "OpenClaw & Hermes" as the canonical long-horizon-agent workload, which is the same architecture pattern that `api-server.md` documents for Hermes Agent's long-form sessions (per `/sources/hackernews.md` 2026-07-30 traceability entry); (b) any Hermes / MiniMax-side response on a future pull becomes the first corroborating event for a `hermes-agent-v0-19-quicksilver` row description extension on agent compute infrastructure patterns. **This is the seventh pull since 2026-08-07 with a fully-zero or noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 noise-only pulls; the 2026-08-18 pull returns to a fully-zero lane across all four vendor queries + the two workflow queries). The pattern confirms that the empty-pulls-on-vendor-queries cadence is normal under the 6-query LLM-agent topic set — not an outage, no config-side intervention needed. The Tavily (web-search) lane remains the productive lane for vendor news; the HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents (machine0 + Stripe/OpenRouter + Copilot Autofix + GPT-5.6 Sol pricing + Claude Code limits + Anthropic multi-agent research) + low-engagement application-domain watchlist items (organoid / neuroscience / Wired features)" rather than vendor-direct signals. The 4-overlap dedup count between `top` and `best` (27 unique from 21+10) is a moderate overlap ratio, in line with the prior 9-overlap (2026-08-17) and 6-overlap (2026-08-16) and 4-overlap (2026-08-15) and 5-overlap (2026-08-13) patterns — the dedup cadence is now stable across pulls. + +| Query lane | Queries run | Qualifying results | +| --- | --- | --- | +| Life sciences / vendors | `organoid`, `CelVivo`, `3Brain`, `Cellink` | 0 (all four queries returned `nbHits=0`) | +| AI workflow | `openwiki`, `deepagents` | 0 (both queries returned `nbHits=0`) | + +Raw dump: `~/.openwiki/connectors/hackernews/raw/2026-08-18T18-00-02-266Z/hackernews-results.json`. + +### Flag-for-traceability: Launch HN machine0 (YC S26) agent-compute VMs, Amazon order emails AI-agent data flow — adjacent, off-scope + +- **49348136** (19 pts top, 12 cmts) **Launch HN: machine0 (YC S26) – Persistent CPU and GPU VMs from the CLI** — `bwm` 2026-08-18 (https://machine0.io). **Strongest Robin-stack-adjacent item of the pull** by virtue of the **explicit "OpenClaw & Hermes run 24/7" citation in submitter text** — the strongest named-stack cross-walk on this pull and the strongest since the 2026-08-13 DeepSeek Harness developer preview (`49285244`). machine0 is a YC S26 launch for a CLI (`machine0 new mybox` creates a persistent cloud VM, billed by the minute, $0.013/hr up to 60 vCPU / 240 GB RAM + GPUs H100s/H200s/RTX 4000 Ada/8×H200, agents self-serve via CLI or MCP, Suspend/snapshot/resume, block storage 10 GB → 16 TB, per-VM profiles bundling credentials/MCP/prompts/env vars, reproducible builds via NixOS flakes or Ansible + Ubuntu). Customer use cases cited: pilot agent → sub-agent fan-out at scale; ML teams for agent-orchestrated RL environments on 60 vCPU machines for days at a time; suspended H100s for overnight inference-speed optimization; product infrastructure with per-session versioned-image machines (~thousands launched, most alive for two minutes). Robin's named stack is Hermes Agent v0.19 Quicksilver + MiniMax-M3+H3 + OpenWiki + RAGFlow + NocoDB + SeaFile + Codex CLI — none of which is currently routed through machine0. **Adjacent-not-promoted** per scope because (a) 19-pt engagement is below the established refresh thresholds (46-pt MCP Memory + 100-pt vendor release bar); (b) machine0 is **not on Robin's named daily-driver stack**; (c) the established scope rule on non-named-stack agent-infrastructure launches keeps them adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself (per the 2026-07-30 / 2026-08-03 / 2026-08-10 / 2026-08-12 / 2026-08-13 / 2026-08-15 / 2026-08-16 / 2026-08-17 traceability entries); (d) the brief's "Workflow tooling priority LOW — surface story-worthy changes only" rule does not promote a YC S26 launch to a `/themes.md` row by itself. Flagged for traceability because (a) the **submitter text directly names "OpenClaw & Hermes run 24/7"** as the canonical use case — the same architecture pattern that Hermes Agent's `api-server.md` documents for long-form sessions; (b) the per-VM profiles + reproducible-builds + suspend/snapshot pattern is the same agent-runtime substrate that Robin's Hermes Agent stack tracks; (c) any Hermes / MiniMax-side response on a future pull (e.g. Hermes v0.21 release notes machine0 as a supported VM provider, or a Hermes Agent patch that integrates with machine0-style per-session profiles, or Robin personally adopting machine0 for a subagent / always-on-agent workflow) becomes the first corroborating event for a `hermes-agent-v0-19-quicksilver` row description extension on agent-compute-infrastructure patterns. **No commitment row** — Robin's current compute substrate is local (the ITX 24h host per `itx-24h-host-build-2026-q3` on `/commitments.md` is the named on-host substrate for Hermes Agent); if machine0 surfaces as a candidate secondary / always-on-cloud VM path on a future pull, that commitment entry is the trigger for follow-up. The same launch was surfaced by the `Cellink` Algolia query as a noise hit on substring fragments (the demo video URL contains the word "calling" via auto-play or transcript) — not because it relates to Cellink bioprinters; this is the third HN item this week where a Cellink noise hit was actually an AI-agent item (after `49332326` Agent Mesh on 2026-08-17 and `49330671` Deepseek Harness Plugin on 2026-08-17), confirming the Cellink Algolia lane is increasingly noisy with non-bioprinter AI items. +- **49348627** (18 pts top, 7 cmts) **Why your Amazon order confirmation emails have become so unhelpful** — `Macha` 2026-08-18 (https://www.theverge.com/ai-artificial-intelligence/977733/amazon-order-emails-google-gmail-ai-agents-data). The Verge article on Amazon's AI-agent-driven order processing feeding AI training data via Gmail — touches the AI-agent data-pipeline lane at the macro level (agent reads email → agent writes email → user-facing output). **Adjacent-not-promoted** per scope because (a) this is a **consumer-AI / consumer-email** story about Amazon + Google + Gmail's AI agent data flow, not on Robin's named stack; (b) the established scope rule on non-named-stack agent-data-architecture stories keeps them adjacent-not-promoted unless there is a direct change to Hermes / MiniMax / OpenWiki / Codex CLI itself; (c) 18-pt engagement is below the refresh thresholds; (d) the item is a Verge opinion piece on Amazon UX rather than a vendor-direct release. **Adjacent-not-promoted** per scope. Flagged for traceability because (a) the agent-data-pipeline pattern is the same macro-pattern as the OKF+memory schema that OpenWiki uses internally (per [`/index.md`](/index.md) `okf_version: "0.1"` and per the [`agent-memory-architecture`](/themes.md) row description); (b) the Amazon-side pattern of "AI agent writes output that the user didn't ask for" mirrors a real Hermes Agent / Codex CLI / OpenWiki trust concern that Robin's tool-use-gate workflow is designed to address (per `/themes/03-ai-agents.md`); (c) if a future HN item at higher engagement documents a Hermes / MiniMax / OpenWiki-side response to the Amazon agent-data-pipeline story (e.g. Hermes Agent v0.21 adding an agent-output-confirmation gate, or a MiniMax API change adding structured-output audit hooks), both items become corroborating evidence for a `hermes-agent-v0-19-quicksilver` row annex on agent-output trust patterns. **No commitment row, no open-question row, no `/themes.md` refresh** — the item is a Verge opinion piece rather than a vendor-direct release, and it does not change Robin's workflow. + +## Update — 2026-08-17 18:00 UTC - **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed returned 26 items, `best` feed returned 17; deduplication gave **34 unique items across both feeds** (9 overlap: `49324985` Qwen 3.8 27B, `49324087` Anthropic Claude watermarks, `49330781` DuckDB v2.0, `49326816` Linear algebra, `49325789` AI regulation, `49325061` Reticulum, `49329575` GPT 5.6 Sol, `49330597` GitHub incident, `49323686` Nvidia/OpenAI infra reduction). The 6-query lane produced the hit table below; the connector completed normally at `fetchedAt: 2026-08-17T18:00:31.353Z` (24-hour window). - **Life-science lane:** **zero vendor-anchored hits across all four named vendor queries — Algolia returned nbHits>0 only as string-collision noise.** The pattern matches the 2026-08-10 + 2026-08-12 pulls (noise-only on substring fragments) rather than the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 pulls (clean zero). Specifically: `organoid` returned `nbHits=6` — all string-collision noise on the "organi-" substring (`49333633` EFF organizations, `49333041` Google Maps "organic mode", `49331551` Saggar terminal "organized", `49331243` SaaS mockup "organization", `49328016` "organised" coding benchmark, `49327500` "organization" productivity essay). `CelVivo` returned `nbHits=0` (clean zero). `3Brain` returned `nbHits=6` — all string-collision noise on the "brain" / author-substring (`49331883` "Future of the Brain" 2005 video, `49331363` MIT "Flexible brain circuits can switch between different tasks" 2pts, `49329122` "brainless" author on Knowledge Graph article, `49328432` "brain protection" device article, `49327500` "brainbattler" productivity blog, `49327395` Columnary Chrome extension with "brain" in body). `Cellink` returned `nbHits=6` — all string-collision noise on substrings "calling"/"celine"/"ceiling"/"welling" (`49333633` EFF "calling", `49332326` Agent Mesh body-text "calling" — see flag-for-traceability note below, `49330671` Deepseek Harness Plugin author "celineycn", `49327308` "ceiling" in Ask HN, `49323983` "Wellington" bookstore, `49322618` tennis "calling"). `openwiki` returned `nbHits=0` (clean zero). `deepagents` returned `nbHits=0` (clean zero). A title/URL regex sweep across the 34 unique top+best items also turned up zero organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink / ClinoStar / ClinoReactor / MEA / spheroid / organ-on-chip items. The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **sixth pull since 2026-08-07 to have an empty / noise-only Algolia lane on vendor queries** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 fully-zero pulls; the 2026-08-10 + 2026-08-12 pulls also returned noise-only on the substring queries). The Tavily web-search lane remains the better signal for vendor news. diff --git a/sources/index.md b/sources/index.md index cb03adf..8b0f0dd 100644 --- a/sources/index.md +++ b/sources/index.md @@ -4,7 +4,7 @@ - [Agents 代理商档案索引 — 跨 agent CRM 同步](agents.md) - Cross-agent index of the Obsidian vault 02-Clients/Agents/* profiles (which agents Robin is actively working with, mapped by vendor product line). Base identity only — sensitive fields (phone / WeChat / email / end-customer list / opportunity value) live only in the private vault. Updated 2026-08-07 with _known_associations.md product-line → agent → end-customer mapping. - [全国经销商地图 (2026-08-07 时点)](distributors-china-2026.md) - Compact index of Robin's 2026-08-07 China distributor baseline (259 dealers across 7 regions, replacing 261 in the 2026-07-24 baseline) plus the new product-association index _known_associations.md. Surfaces CelVivo ClinoStar → 济南成全 + FemtoBiomed CellShot → 9X Bio → TriArm Therapeutics chain. Routes pricing-sensitive fields to the private Obsidian vault per /sources/agents.md privacy rule. - [飞书邮箱 (Robin customer mailbox)](feishu-mail.md) - Planned cross-agent mailbox sync target for Robin's Feishu (飞书) mailbox (imap.feishu.cn:993 / imap.larksuite.com:993) — would let MiniMax code / Hermes recall 'what did Robin last discuss with customer X' from email metadata + summaries. Not yet provisioned — IMAP credentials + update script + crontab still pending Robin setup; this page documents the planned configuration and the sync policy that will be applied once provisioned. -- [Git repo — evidence index (Obsidian vault, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, 7 new vault commits in the 2026-08-15T18:07Z → 2026-08-17T18:09Z 48-hour window) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD be49285, 2026-08-17). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here. +- [Git repo — evidence index (Obsidian vault, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD a4fa5a32, 2026-08-16, 7 new vault commits in the 2026-08-15T18:07Z → 2026-08-17T18:09Z 48-hour window; **0 new vault commits in the 2026-08-17T18:09Z → 2026-08-18T18:10Z 24-hour window — vault is silent**) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD 1fc73ae, 2026-08-18, **2 new automated wiki commits in the 2026-08-17T18:09Z → 2026-08-18T18:10Z window: `8127797` daily update 2026-08-18 + `1fc73ae` sources-sync 2026-08-18**). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here. - [Hacker News — evidence index](hackernews.md) - Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items. - [文献精读 Master Template (Robin 7-27 实战版, "真适合浏览" 1 文件)](ldr-report-template.md) - Master template for Robin's literature-deep-read (LDR) pipeline — consolidates 4 literature skills (`literature-deep-read` / `research` / `review` / `curation-for-sales`) into a single 8-rule + 3-trigger + 5-section "真适合浏览" report format. Synthesized from 4-27 SOP范本 + 7-27 实战 lessons (Tasevska / Raji / Bosnjakovic). Triggers "精读吧" / "发 wikijs" / "入库" / "A" / Id/DOI/PMID/PDF signals into 4-step精简 or 8-step完整 flows. PDF全文必传 + PyMuPDF xref去重 + 9项强制 + SeaFile hostname `fb.biokingdom.top` + NocoDB v1 JSON + 3张真图 + `journal-year-topic` 报告路径. - [Bosnjakovic 2025 PAH 3D 球体代谢组学: 跟 CelVivo ClinoStar dynamic culture 关系 (Bosnjakovic 2025 bioRxiv)](literature-cel-bosnjakovic-2025-pah-deepread.md) - Deep-read synthesis of Bosnjakovic A et al. 2025 bioRxiv preprint (DOI 10.1101/2025.07.10.663939v1, 2025-07-10) — 21-day mature HepG2 3D spheroids with graded non-cytotoxic BaP + BBF (PAH代表物) exposure for metabolomics biomarker discovery. Robin's connection: 3D spheroid protocol maps directly onto CelVivo ClinoStar dynamic culture; supports PAH exposure metabolomics positioning for hepatotoxicity / NAFLD modeling applications. 精读 2026-07-27. @@ -15,15 +15,15 @@ - [Sharma 2026 — vascularized retinal organoid RGC survival and maturation (Cell Stem Cell)](literature-sharma-2026-cell-stem-cell-vascularized-retinal-organoid-rgc-deepread.md) - Deep-read synthesis of Sharma K et al. (2026) Cell Stem Cell — transiently vascularized human retinal organoids with RGC 18.2% vs ctrl-RO 1.21% at week 18, W31 ON/OFF/ON-OFF light responses, C3 endothelial monolayer integration strategy. - [3D 打印缓释 HCTZ 片: 跟 Cellink BIO X 挤出打印 (Tasevska 2025 EJPS)](literature-tasevska-2025-deepread.md) - Deep-read synthesis of Tasevska T et al. 2025 European Journal of Pharmaceutical Sciences 206:106998 (DOI 10.1016/j.ejps.2024.106998, 精读 2026-07-27) — first systematic SSE semi-solid extrusion vs DLP digital-light-processing comparison for sustained-release HCTZ (hydrochlorothiazide) tablets, with focus on SSE matching Cellink BIO X extrusion principle. Supports Robin's 3D-printed personalized-dose / sustained-release positioning and SSE extruder cross-sell narrative for Cellink BIO X accounts. - [Literature Deep-Reads — cross-agent deep-read index](literature.md) - Cross-agent index of Robin's literature deep-reads across the 4 vendor product lines (CelVivo / 3Brain / Cellink / Femtobiomed) and adjacent application domains (organoid IRB / ethics, vascularized organoids, microfluidic / organ-on-chip). Backed by the Obsidian vault 04-Literature/Deep-Reads/ and the flywheel-sync pipeline; synthesis pages are linked per paper. -- [NocoDB 文献库索引 — 跨 agent 数据层](nocodb.md) +- [NocoDB 文献库索引 — 跨 agent 数据层](nocodb.md) - Compact index of Robin's NocoDB instance at 10.10.10.254 — 13 literature tables (brain_organoid_literature, intestinal_organoid_literature, Celvivo_literature CORE, cardiac_organoid_literature, cancer_organoid_literature, liver_organoid_literature, other_organoid_literature, kidney_organoid_literature, retinal_organoid_literature, Cellink_literature, organoid_literature old, lung_organoid_literature, 3Brain_literature) auto-refreshed daily by `~/.local/bin/openwiki-update-sources.sh`. Last sync 2026-08-17T18:30:02Z, total 6618 records. Complements RAGFlow (full-text), Obsidian (deep-reads), and OpenWiki (synthesis layer). - [OpenWiki Upgrade Drift (auto-generated)](openwiki-version-drift.md) - [OpenWiki 速查手册 (Robin 一次聊清, 直接拿来用)](OpenWiki%E9%80%9F%E6%9F%A5%E6%89%8B%E5%86%8C.md) - Compact OpenWiki cheat-sheet that condenses the 2026-07-27 6-conversation walkthrough into a single ready-to-share document. Designed for one-shot delivery to any agent / colleague / customer / manager who asks 'what is OpenWiki?' — covers the core concept, structure, sync model, and 4 active connectors in one page. - [RAGFlow 文档采样索引](ragflow-documents.md) - Document-level sample index of Robin's RAGFlow instance (http://10.10.10.254:9980) — 18 KBs / 32709 total docs / 401 sample entries (last sync 2026-08-03). Captures the 30-doc-per-request server-side limit + offset bug that forces 12 large KBs to single-page samples. Lets MiniMax code / Hermes see 'what's in each KB' without SQL queries; complements `/sources/ragflow.md` (KB-level health + counts). -- [RAGFlow 全文检索索引 (Robin KB system)](ragflow.md) +- [RAGFlow 全文检索索引 (Robin KB system)](ragflow.md) - Compact index of Robin's RAGFlow KB system at 10.10.10.254:9980 — 14 knowledge bases of full-text retrieval over PDF original text. Last sync 2026-08-17T18:30:02Z; landing returns 200, `/api/v1/datasets` returns 401 (auth-required). 2026-07-17 embedding/bge-reranker outage degraded vector retrieval but metadata + document downloads remain available; KB content sync runs over a degraded path. - [Sources](README.md) - Per-connector evidence indexes and ingestion coverage for the local knowledge wiki; durable synthesis lives on canonical pages. - [RustDesk 自建 hbbs 完整配置笔记 (2026-08-05)](rustdesk-sop.md) - End-to-end deployment note for Robin's self-hosted RustDesk relay server (hbbs + hbbr) — Unraid NAS container (10.10.10.254) + OpenWrt reverse-proxy (10.10.10.252) + Tencent Light Cloud (43.160.207.177) + ITX client (192.168.31.14), with permanent password + key config. Supports remote control of the ITX 24h host (per `/commitments.md` `itx-24h-host-build-2026-q3`) and Robin's travel-laptop remote-access workflow. - [CelVivo 销售弹药清单 (2026-07-16 实战索引)](sales-ammunition.md) - Sales ammunition index for CelVivo ClinoStar / ClinoReactor — price-book SKUs (ClinoReactor 12-pack, ClinoStar, SP5D-24W, Demo kit), 8-protocol SOP series (ClinoReactor prep / media change / organoid gardening / speed-tuning / alginate / VitroGel), and 5 organ-specific application cases (HepG2, FTC-133, SCLC, TNBC, ClinoStar vs Orbital Shaker). Sources from RAGFlow CelVivo KB + CelVivo commercial KB; manually curated from Robin + Hermes 实战 lessons. Used by any agent answering CelVivo ClinoReactor pricing / demo / customer-pitch queries. -- [SeaFile 大文件存储索引](seafile.md) +- [SeaFile 大文件存储索引](seafile.md) - Compact index of Robin's SeaFile instance at 10.10.10.254:9898 (public domain fb.biokingdom.top) — 4-6 storage libraries for PDFs / product docs / literature sharing. v1.2 seafile-util skill (2026-07-16) wired up: 9898 API + 40-char token + `Authorization: Token ` header. Closes the loop PDF → SeaFile (storage) → Wiki.js (publish) → OpenWiki (index) → MiniMax code (query) → Robin (customer). - [CelVivo + Vault 实时 mtime 快照 (2026-07-16 快照)](vault-mtime-snapshot-2026-07-16.md) - Historical mtime snapshot of Robin's Obsidian vault from 2026-07-16 — captures CelVivo deep-read activity (0 new entries in the 7-day window 2026-07-09 → 2026-07-16; last activity 2026-07-05), 6 entries in the 30-day window, and ClinoReactor keyword hits. Provides a baseline reference for cross-agent vault state because WSL laptop vault is not directly readable from container agents. Pre-dates the 2026-08-07 distributor refresh + 2026-08-12 Liang 2026 / 2026-08-13 Review/ subfolder activity — superseded by `/themes/05-robin-research.md` for current vault state. - [Web Search Evidence](web-search.md) - Compact, source-backed evidence and ingestion coverage for the web-search-1 Tavily lane tracking CelVivo, 3Brain, Cellink, and related organoid news. -- [Wiki.js 索引 — 跨 agent 文档发布层](wikijs.md) +- [Wiki.js 索引 — 跨 agent 文档发布层](wikijs.md) - Compact index of Robin's Wiki.js instance at 10.10.10.254:3000/graphql — Biokingdom publishing layer for organoid / 3D bioprinting / HD-MEA / CRISPR organoid content. Last sync 2026-08-17T18:30:02Z; sample union (5 orderBy) returns 83 unique pages, ID range 22..1704, locale split en=5 / zh=78; max-id-based estimate ≥1704 pages (server-side `pages.list(limit:N)` caps at ~50, so full inventory requires frontend crawl / direct DB query). diff --git a/sources/nocodb.md b/sources/nocodb.md index 0c4a6ca..90876f3 100644 --- a/sources/nocodb.md +++ b/sources/nocodb.md @@ -1,3 +1,10 @@ +--- +type: "Reference" +title: "NocoDB 文献库索引 — 跨 agent 数据层" +description: "Compact index of Robin's NocoDB instance at 10.10.10.254 — 13 literature tables (brain_organoid_literature, intestinal_organoid_literature, Celvivo_literature CORE, cardiac_organoid_literature, cancer_organoid_literature, liver_organoid_literature, other_organoid_literature, kidney_organoid_literature, retinal_organoid_literature, Cellink_literature, organoid_literature old, lung_organoid_literature, 3Brain_literature) auto-refreshed daily by `~/.local/bin/openwiki-update-sources.sh`. Last sync 2026-08-17T18:30:02Z, total 6618 records. Complements RAGFlow (full-text), Obsidian (deep-reads), and OpenWiki (synthesis layer)." +tags: [nocodb, source, cross-agent-data, organoid-literature, 2026-08-17] +--- + # NocoDB 文献库索引 — 跨 agent 数据层 > 数据源: NocoDB 13 个文献库 + 2 个公司库 (实时,每次 OpenWiki cron 跑时更新) diff --git a/sources/ragflow.md b/sources/ragflow.md index 2552994..a0f5890 100644 --- a/sources/ragflow.md +++ b/sources/ragflow.md @@ -1,3 +1,10 @@ +--- +type: "Reference" +title: "RAGFlow 全文检索索引 (Robin KB system)" +description: "Compact index of Robin's RAGFlow KB system at 10.10.10.254:9980 — 14 knowledge bases of full-text retrieval over PDF original text. Last sync 2026-08-17T18:30:02Z; landing returns 200, `/api/v1/datasets` returns 401 (auth-required). 2026-07-17 embedding/bge-reranker outage degraded vector retrieval but metadata + document downloads remain available; KB content sync runs over a degraded path." +tags: [ragflow, source, full-text-retrieval, rag, 2026-08-17] +--- + # RAGFlow 全文检索索引 (Robin KB system) > 数据源: RAGFlow (http://10.10.10.254:9980/) 14 个 KB 全文检索结果 diff --git a/sources/seafile.md b/sources/seafile.md index f9b428e..9d2c8e3 100644 --- a/sources/seafile.md +++ b/sources/seafile.md @@ -1,3 +1,10 @@ +--- +type: "Reference" +title: "SeaFile 大文件存储索引" +description: "Compact index of Robin's SeaFile instance at 10.10.10.254:9898 (public domain fb.biokingdom.top) — 4-6 storage libraries for PDFs / product docs / literature sharing. v1.2 seafile-util skill (2026-07-16) wired up: 9898 API + 40-char token + `Authorization: Token ` header. Closes the loop PDF → SeaFile (storage) → Wiki.js (publish) → OpenWiki (index) → MiniMax code (query) → Robin (customer)." +tags: [seafile, source, file-storage, biokingdom, 2026-08-17] +--- + # SeaFile 大文件存储索引 > 数据源: SeaFile (http://10.10.10.254:9898/) 共 N 个资料库 diff --git a/sources/web-search.md b/sources/web-search.md index e7e5098..c0e0385 100644 --- a/sources/web-search.md +++ b/sources/web-search.md @@ -2,12 +2,20 @@ type: "Reference" title: "Web Search Evidence" description: "Compact, source-backed evidence and ingestion coverage for the web-search-1 Tavily lane tracking CelVivo, 3Brain, Cellink, and related organoid news." -tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-12, 2026-08-15, 2026-08-16, 2026-08-17] +tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-12, 2026-08-15, 2026-08-16, 2026-08-17, 2026-08-18] --- # Web Search Evidence -> Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on any of these five runs. +> Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on any of these six runs. + +## 2026-08-18 attempted update — skipped + +- **Status:** skipped. `web-search-1` is not enabled; the connector reports that `enabled=true` must be set in `~/.openwiki/connectors/web-search/config.json`. +- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. +- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-17T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. +- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. +- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 runs hit the same blocker; this is the **sixth consecutive skip on the same code path**. ## 2026-08-17 attempted update — skipped @@ -15,7 +23,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08- - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-16T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. -- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 runs hit the same blocker; this is the **fifth consecutive skip on the same code path**. +- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 runs hit the same blocker; the 2026-08-18 run hit the same blocker too. This was the **fifth consecutive skip on the same code path at the time of the 2026-08-17 attempt** (and the sixth skip including the 2026-08-18 follow-up). ## 2026-08-15 attempted update — skipped @@ -23,7 +31,7 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08- - **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made. - **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC. - **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. -- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, and 2026-08-12 runs hit the same blocker; the 2026-08-17 run hit the same blocker too. This was the fourth consecutive skip on the same code path at the time of the 2026-08-15 attempt (and the fifth skip including the 2026-08-17 follow-up). +- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, and 2026-08-12 runs hit the same blocker; the 2026-08-17 and 2026-08-18 runs hit the same blocker too. This was the fourth consecutive skip on the same code path at the time of the 2026-08-15 attempt (and the sixth skip including the 2026-08-17 and 2026-08-18 follow-ups). ## 2026-08-12 attempted update — skipped @@ -580,3 +588,11 @@ on the existing `3brain-coreplate-2026-conference-positioning` verification comm - **Tavily answer-text quality:** the 3Brain answer is now correct (first time in 11 pulls); the Cellink Lumen X answer is substantive; the Hermes/M3 answer is partially fabricated ("release date of June 1, 2026") — treat as untrusted. Connector-side quality flag for future pulls: continue to treat Tavily answer text as untrusted; trust the underlying URL + score + published_date. - **Operational note for the connector:** Tavily is back online after a 3-day outage streak. The pull 8 / pull 9 / pull 10 advice to check `TAVILY_API_KEY`, Tavily status, and rate-limit posture no longer applies — the lane is functional again. No connector-side configuration change is required. - **Coverage:** fetched `2026-08-03T18:08:50.866Z`; 10 queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`. +queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`. +ion commitment. No new commitment; existing commitment Notes are extended. + 3. **CelVivo ClinoStar 2 / Thailand Lab 2026** — independent confirmation from an Indian distributor event page on the existing `celvivo-clinostar-2-nams-demo-2026` verification commitment. No new commitment; existing commitment Notes are extended. +- **Workflow tooling refreshes:** `agent-memory-architecture` Last seen → 2026-08-03 (akitaonrails/ai-memory research doc added). `hermes-agent-v0-19-quicksilver` and `MiniMax-m3` evidence columns refreshed with same-week artifacts (Last seen unchanged at 2026-08-03 from the HN pull). +- **Tavily answer-text quality:** the 3Brain answer is now correct (first time in 11 pulls); the Cellink Lumen X answer is substantive; the Hermes/M3 answer is partially fabricated ("release date of June 1, 2026") — treat as untrusted. Connector-side quality flag for future pulls: continue to treat Tavily answer text as untrusted; trust the underlying URL + score + published_date. +- **Operational note for the connector:** Tavily is back online after a 3-day outage streak. The pull 8 / pull 9 / pull 10 advice to check `TAVILY_API_KEY`, Tavily status, and rate-limit posture no longer applies — the lane is functional again. No connector-side configuration change is required. +- **Coverage:** fetched `2026-08-03T18:08:50.866Z`; 10 queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`. +queries; raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json`; instance `web-search-1`. diff --git a/sources/wikijs.md b/sources/wikijs.md index 844e4cf..b47c58a 100644 --- a/sources/wikijs.md +++ b/sources/wikijs.md @@ -1,3 +1,10 @@ +--- +type: "Reference" +title: "Wiki.js 索引 — 跨 agent 文档发布层" +description: "Compact index of Robin's Wiki.js instance at 10.10.10.254:3000/graphql — Biokingdom publishing layer for organoid / 3D bioprinting / HD-MEA / CRISPR organoid content. Last sync 2026-08-17T18:30:02Z; sample union (5 orderBy) returns 83 unique pages, ID range 22..1704, locale split en=5 / zh=78; max-id-based estimate ≥1704 pages (server-side `pages.list(limit:N)` caps at ~50, so full inventory requires frontend crawl / direct DB query)." +tags: [wikijs, source, publishing-layer, biokingdom, graphql, 2026-08-17] +--- + # Wiki.js 索引 — 跨 agent 文档发布层 > 数据源: Wiki.js (http://10.10.10.254:3000/graphql) Biokingdom 实例 diff --git a/themes/05-robin-research.md b/themes/05-robin-research.md index b77ac02..f7f5b33 100644 --- a/themes/05-robin-research.md +++ b/themes/05-robin-research.md @@ -2,8 +2,8 @@ type: "Reference" title: "Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)" description: "Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting)." -tags: [theme, research, vault, deep-read, sales, crm, life-sciences, 2026-08-17, 2026-08-15, 2026-08-13] -timestamp: 2026-08-17T18:09:32Z +tags: [theme, research, vault, deep-read, sales, crm, life-sciences, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13] +timestamp: 2026-08-18T18:10:12Z --- # Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM) @@ -51,7 +51,7 @@ The diagram shows Robin's research substrate: a single Obsidian vault with 8 buc ## Knowledge substrate: Obsidian vault -Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-17T18:09:32Z): +Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-18T18:10:12Z): | Field | Value | | --- | --- | @@ -61,9 +61,9 @@ Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08 | Ahead of origin/main | 20 commits new since 2026-08-03 fetch (was 13 at the 2026-08-15 fetch; the +7 delta is the Quintard 2024 + Guo 2026 clusters) | | Auth | local path only — no remote, no credentials | | Working-tree state | dirty (23 untracked files + 2 new untracked directories — `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` — both untracked; the `Review/zhou2023_computer_vision_microfluidics.md` first-entry-in-Review/-subfolder is still-uncommitted, carrying forward from the 2026-08-13 fetch) | -| Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-17T18-09-32-895Z/manifest.json` | +| Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-18T18-10-12-916Z/manifest.json` | | **Latest cluster (2026-08-16, replacing the 2026-08-12 Liang 2026 cluster)** | **Quintard 2024 Nat Commun + Guo 2026 Front Cell Dev Biol 7-commit LDR cluster** (`0fc8db24` Quintard adds file 189 lines → `290e9635` -v2 → `24c713de` -v3 → `4073abf4` -v4 → `2e6f5989` Guo adds file 170 lines → `00f824f2` -v2 → `a4fa5a32` -v3) — **net-new external evidence** (DOI 10.1038/s41598-026-42990-2, PMID 41857098, mouse liver 3-轨道 Hep-Orgs + Cho-Orgs + HSC + DAPT+Dex P1-P10 长程成熟 + TGFβ 激活体外纤维化模型) | -| **Latest uncommitted artifact (2026-08-13 → 2026-08-17, multi-file)** | `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` (carry-forward untracked from 2026-08-13) + **2 new untracked directories added at the 2026-08-17 fetch**: `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder) + `templates/类器官IRB申请清单.md` (180-line IRB application checklist derived from Guo 2026; Robin's first customer-facing template produced from a single deep-read — see the new Templates subtree below) | +| **Latest uncommitted artifact (2026-08-13 → 2026-08-17, multi-file, unchanged at the 2026-08-18T18:10Z fetch)** | `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` (carry-forward untracked from 2026-08-13, now at **7-day carry-forward** at the 2026-08-18 fetch — file mtime `2026-08-11 16:31:54 +0800` so mtime-based carry-forward is 7 days; first-observation-date-based carry-forward is 5 days; structural signal continues to weaken per `/sources/git-repo.md` Notable-entity entry) + **2 new untracked directories added at the 2026-08-17 fetch**: `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder) + `templates/类器官IRB申请清单.md` (180-line IRB application checklist derived from Guo 2026; Robin's first customer-facing template produced from a single deep-read — see the new Templates subtree below) | ### Vault navigation index (top-level folders) @@ -413,4 +413,5 @@ These are source-anchored but not vendor-anchored — they live here for traceab | Where does Cellink output land? | [`/themes/02-bioprinting.md`](/themes/02-bioprinting.md) | | What does Quintard 2024 say about vascularized organoid chips? | `obsidian-vault/Literature/Deep-Reads/Organoid/quintard_2024_vasorganoid_chip.md` (vault path; deep-read synthesis not yet split out to `/sources/`) | | What does Guo 2026 say about organoid IRB ethics? | `obsidian-vault/Literature/Deep-Reads/Organoid/guo_2026_organoid_ethical_review.md` (vault path; deep-read synthesis not yet split out to `/sources/`) | +| What's the IRB application checklist for organoid research? | `templates/类器官IRB申请清单.md` v1.0 (vault path; untracked) ||th; deep-read synthesis not yet split out to `/sources/`) | | What's the IRB application checklist for organoid research? | `templates/类器官IRB申请清单.md` v1.0 (vault path; untracked) || \ No newline at end of file