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.last-update.json
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{
"updatedAt": "2026-09-01T18:13:51.096Z",
"updatedAt": "2026-09-02T18:24:17.815Z",
"command": "update",
"model": "MiniMax-M3",
"status": "interrupted",
"status": "complete",
"language": "en"
}
index.md
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- [2026-07-16 工具链打通战报](memory-2026-07-16-tools-final.md) - After-action report on Robin's 2026-07-16 end-to-end toolchain integration: OpenWiki + Gitea + NocoDB + RAGFlow + Wiki.js + MiniMax code all wired together and working in production. Snapshot of the pre-flywheel-sync state — pre-dates the 2026-07-26 HN + Tavily launches and the 2026-07-29 Tavily cluster / 2026-08-08 literature flywheel-sync milestones.
- [Open Questions](open-questions.md) - Active, Answered, and Stale unresolved questions about Robin's memory, recurring routines, people, projects, and wiki quality. Source-document TODOs and product questions live on their source pages instead.
- [Personal Logistics](personal-logistics.md) - Personal errands, appointments, pickups, travel, household/life-admin deadlines, and other non-work logistics. Work commitments live in /commitments.md.
- [Robin's Local Knowledge Base](quickstart.md) - OpenWiki entrypoint and orientation — Robin's personal knowledge base with 5 synthesis themes (organoid equipment, bioprinting, AI agents, local LLM, personal research), navigation map, current connector status, and backlog. The 2026-09-01 18:00 UTC hackernews-1 fetch is the **twenty-second pull since 2026-08-07**, surfacing **a noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6** — `organoid` 4 substring-noise hits on `organiz-`/`organi-` (Executor / Supafork / Dashwise / Rxlab market — all coding-agent / homelab / financial-agent off-scope) + `3Brain` 6 substring-noise hits on `brain` (Thinking Wattage AI vs Human Brain / HEPA air purifiers brain function / Keeplea / brain health / Intelligence Without Brains / depression neurons — all off-scope neuroscience / brain-culture items) + `Cellink` 10 substring-noise hits on `celli-`/`helsinki`/`telling`/`selling` collisions (Nori Robotics / GPT-OSS security audit / Proton Down / Don't call databases CP/AP / EU Cyber Resilience Act / Trump FCC punish journalist / How are you referring to software + agents / Selling Out / Americans UFOs / Claude Opus gotten worse — all off-scope items); `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items` (the **sixth fully-zero `deepagents` lane in a row** after the 2026-08-27 first-positive LangChain deepagents `49461911` single-event thematic signal); **25 unique top+best items** (top 21 + best 10 - 6 overlap: `49523754` Play Store blocks AuroraStore + `49520022` AnkiDroid donation link + `49512975` ASCII cyberpunk city + `49517448` Fastpotify + `49519939` small transformer essay + `49517624` Restroom Archive — the 25-item dedup count is -4 from the 2026-08-31 pull's 29 unique, a -4 drop driven by a less-populated 24-hour window with `top` 21/30 and `best` 10/30). One named-stack-adjacent item flagged for traceability — **`49524447` "Show HN: Running 104GB Qwen3.8-Flash-Next on 48GB Mac with at ~12 tok/s"** (36 pts top + 34 cmts, by `carloslfu` 2026-09-01, https://github.com/carloslfu/slotstream — Show HN local-LLM deployment of Qwen3.8-Flash-Next on a 48GB Mac via the slotstream project; **0.94 cmts-to-upvote ratio indicates substantive technical discussion rather than passive upvote stream**) — **12th entry in the open-weight-LLM cluster of the 2026-08-07 streak**, joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts — the **open-weight-LLM cluster now totals ~3,354+ pts across 12 items in 10 pulls over 13 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; the Qwen3.8-Flash-Next-on-Mac item corroborates the `MiniMax-m3` row's open-weight comparison anchor + the unsloth/MiniMax-M3-GGUF local-LLM run path — **the `MiniMax-m3` row on `/themes.md` gets a description refresh** to mention the open-weight-LLM cluster now totals ~3,354+ pts across 12 items in 10 pulls over 13 days with the 2026-09-01 `49524447` Qwen3.8-Flash-Next-on-Mac 12th entry; Last seen stays at 2026-08-03 because the 2026-09-01 pull does not surface any MiniMax-M3 or MiniMax-H3 release; the prior 2026-08-31 `agent-memory-architecture` row refresh from `49511007` Almanac (YC S26) + the prior 2026-08-25 `class-organoid-3d-bioprinting` Last-seen refresh carry forward unchanged; Tavily (web-search) remains the productive lane for vendor news. The 2026-08-28 18:09 UTC git-repo-1 fetch observed **vault HEAD unchanged** at `9d4767c7` (**0 new vault commits** for the 3rd consecutive fetch since the 2026-08-24/25 burst, 3 calendar days stale); wiki HEAD bumped `502281f8` → `6024ac7` via 2 automated wiki commits (`c992dd6` sources-sync 2026-08-28 — the **fourteenth** consecutive sources-sync re-applying the count-data wipe pattern + `6024ac7` 16-file daily update 2026-08-28 reducing dirty count 17 → 5); the 4 carry-forward untracked directories bumped carry-forward at the 2026-08-28 fetch: `Review/zhou2023_computer_vision_microfluidics.md` 16 → 17-day (**one-off interpretation confirmed at 2026-08-28 fetch**, entry should be demoted to stale / not recurring carry-forward note on next synthesis pass), `celvivo_commercial/` + `templates/` 11 → 12-day (**now confirmed one-off alongside the `Review/` entry**), `deepread_40240593/` 4 → 5-day (working-folder pipeline hypothesis continuing to weaken — 4 consecutive silent fetches since the 2026-08-24/25 burst) — synthesis layer unchanged because vault produced no new external evidence. The 2026-08-27 18Line truncated
- [Robin's Local Knowledge Base](quickstart.md) - OpenWiki entrypoint and orientation — Robin's personal knowledge base with 5 synthesis themes (organoid equipment, bioprinting, AI agents, local LLM, personal research), navigation map, current connector status, and backlog. The 2026-09-02 18:00 UTC hackernews-1 fetch is the **twenty-third pull since 2026-08-07**, surfacing **the second `nbHits-positive-but-items-zero` anomaly occurrence (after 2026-08-31)** — `organoid` `nbHits=8 / items=0` + `3Brain` `nbHits=6 / items=0` + `Cellink` `nbHits=6 / items=0` (Algolia substring-noise hits materialized as `hits` in the raw response object but were not promoted to the connector-level `items` field); `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items`; **37 unique top+best items** (top 29 + best 12 - 4 overlap: `49537553` Gemini 3.8 Flash + `49535752` A Note from LWN + `49533497` Commodore 64 + `49535284` Mistral trains on user input — the 37-item dedup count is +12 from the 2026-09-01 pull's 25 unique, the **largest single-day dedup increase of the 2026-08-07 streak since the 2026-08-30 pull's +13 jump**); one open-weight-LLM cluster entry + one Gemini-closed-weight adjacent + one Codex CLI adjacent flagged for traceability — **`49529132` "My local model setup on an M4 Pro Mac Mini"** (271 pts best + 172 cmts, by `raybb` 2026-09-01, https://lws.io/blog/my-local-model-setup/ — local-LLM setup essay on an M4 Pro Mac Mini; **0.63 cmts-to-upvote ratio indicates substantive technical discussion**) — **13th entry in the open-weight-LLM cluster** joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts + 2026-09-01 Qwen3.8-Flash-Next on 48GB Mac 36 pts — the **open-weight-LLM cluster now totals ~3,625+ pts across 13 items in 11 pulls over 14 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; the M4 Pro Mac Mini framing is the same Apple Silicon deployment target as the prior 2026-09-01 Qwen3.8-Flash-Next-on-Mac item — **second consecutive Mac-Mini-class local-LLM deployment item on the cluster**, reinforcing Apple Silicon as a key inference target for open-weight models alongside the unsloth/MiniMax-M3-GGUF local-LLM run path that the `MiniMax-m3` row references; the **271-pt engagement is the highest of the open-weight-LLM cluster since the 2026-08-30 Tencent Hy4 364 pts**; the M4 Pro Mac Mini item matches existing topics (`MiniMax-m3` row's open-weight comparison anchor) + corroborates existing sources (multiple prior Qwen3.8-Flash-Next entries + the unsloth/MiniMax-M3-GGUF local-LLM run path + the prior 2026-09-01 Qwen3.8-Flash-Next-on-Mac item) — **`49537553` "Gemini 3.8 Flash and 3.8 Flash Cyber"** (464 pts top+best + 268 cmts, by `bratao` 2026-09-02, https://blog.google/innovation-and-ai/models-and-research/gemini-models/3-8-flash-and-3-8-flash-cyber/ — Google blog; **highest-engagement top-feed item of the pull**; closed-weight Gemini release adjacent to the `MiniMax-m3` row's closed-weight comparison anchor via Gemini / M3 cross-walk; **adjacent-not-promoted** per scope because Gemini is not on Robin's named daily-driver stack) — **`49527396` "The ChatGPT/Codex app bundles a full copy of LibreOffice"** (473 pts best + 227 cmts, by `timpera` 2026-09-01, https://simonwillison.net/2026/Sep/1/codex-libreoffice/ — Simon Willison's blog post; **highest-engagement Codex CLI adjacent item of the 2026-08-07 streak**; Codex CLI is on Robin's named coding-agent stack; **adjacent-not-promoted** per scope because the post is about the ChatGPT/Codex app's LibreOffice bundling rather than a Codex CLI release Robin acts on); the **`MiniMax-m3` row on `/themes.md` gets a description refresh** to mention the open-weight-LLM cluster now totals ~3,625+ pts across 13 items in 11 pulls over 14 days with the 2026-09-02 `49529132` M4-Pro-Mac-Mini 13th entry; Last seen stays at 2026-08-03 because the 2026-09-02 pull does not surface any MiniMax-M3 or MiniMax-H3 release; the prior 2026-09-01 `MiniMax-m3` row refresh from `49524447` Qwen3.8-Flash-Next-on-Mac + the prior 2026-08-31 `agent-memory-architecture` row refresh from `49511007` Almanac (YC S26) + the prior 2026-08-25 `class-organoid-3d-bioprinting` Last-seen refresh carry forward unchanged; Tavily (web-search) remains the productive lane for vendor news. The 2026-09-01 18:00 UTC hackernews-1 fetch is the **twenty-second pull since 2026-08-07**, surfacing **a noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6** — `organoid` 4 substring-noise hLine truncated
- [OpenWiki 现状 + 操作手册 (2026-07-27)](README-ACTIVATION.md) - Activation status + operations manual for Robin's local OpenWiki knowledge base as of 2026-07-27. Documents 4 active connectors (HN + git-repo + Tavily + RAGFlow) and the per-source sync scripts (HN top+best feeds, Tavily web-search with TAVILY_API_KEY, git-repo Obsidian vault at /home/ldw/workspace, RAGFlow full-text retrieval at 10.10.10.254:9980). Captures the on-disk Gitea commit + push pattern.
- [Themes](themes.md) - Recurring topics, signals, and trends observed across Robin's sources. Index of theme rows with confidence labels and source citations; details live on the linked source and synthesis pages.
quickstart.md
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type: "Reference"
title: "Robin's Local Knowledge Base"
description: >
OpenWiki entrypoint and orientation — Robin's personal knowledge base with 5 synthesis themes (organoid equipment, bioprinting, AI agents, local LLM, personal research), navigation map, current connector status, and backlog. The 2026-09-01 18:00 UTC hackernews-1 fetch is the **twenty-second pull since 2026-08-07**, surfacing **a noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6** — `organoid` 4 substring-noise hits on `organiz-`/`organi-` (Executor / Supafork / Dashwise / Rxlab market — all coding-agent / homelab / financial-agent off-scope) + `3Brain` 6 substring-noise hits on `brain` (Thinking Wattage AI vs Human Brain / HEPA air purifiers brain function / Keeplea / brain health / Intelligence Without Brains / depression neurons — all off-scope neuroscience / brain-culture items) + `Cellink` 10 substring-noise hits on `celli-`/`helsinki`/`telling`/`selling` collisions (Nori Robotics / GPT-OSS security audit / Proton Down / Don't call databases CP/AP / EU Cyber Resilience Act / Trump FCC punish journalist / How are you referring to software + agents / Selling Out / Americans UFOs / Claude Opus gotten worse — all off-scope items); `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items` (the **sixth fully-zero `deepagents` lane in a row** after the 2026-08-27 first-positive LangChain deepagents `49461911` single-event thematic signal); **25 unique top+best items** (top 21 + best 10 - 6 overlap: `49523754` Play Store blocks AuroraStore + `49520022` AnkiDroid donation link + `49512975` ASCII cyberpunk city + `49517448` Fastpotify + `49519939` small transformer essay + `49517624` Restroom Archive — the 25-item dedup count is -4 from the 2026-08-31 pull's 29 unique, a -4 drop driven by a less-populated 24-hour window with `top` 21/30 and `best` 10/30). One named-stack-adjacent item flagged for traceability — **`49524447` "Show HN: Running 104GB Qwen3.8-Flash-Next on 48GB Mac with at ~12 tok/s"** (36 pts top + 34 cmts, by `carloslfu` 2026-09-01, https://github.com/carloslfu/slotstream — Show HN local-LLM deployment of Qwen3.8-Flash-Next on a 48GB Mac via the slotstream project; **0.94 cmts-to-upvote ratio indicates substantive technical discussion rather than passive upvote stream**) — **12th entry in the open-weight-LLM cluster of the 2026-08-07 streak**, joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts — the **open-weight-LLM cluster now totals ~3,354+ pts across 12 items in 10 pulls over 13 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; the Qwen3.8-Flash-Next-on-Mac item corroborates the `MiniMax-m3` row's open-weight comparison anchor + the unsloth/MiniMax-M3-GGUF local-LLM run path — **the `MiniMax-m3` row on `/themes.md` gets a description refresh** to mention the open-weight-LLM cluster now totals ~3,354+ pts across 12 items in 10 pulls over 13 days with the 2026-09-01 `49524447` Qwen3.8-Flash-Next-on-Mac 12th entry; Last seen stays at 2026-08-03 because the 2026-09-01 pull does not surface any MiniMax-M3 or MiniMax-H3 release; the prior 2026-08-31 `agent-memory-architecture` row refresh from `49511007` Almanac (YC S26) + the prior 2026-08-25 `class-organoid-3d-bioprinting` Last-seen refresh carry forward unchanged; Tavily (web-search) remains the productive lane for vendor news. The 2026-08-28 18:09 UTC git-repo-1 fetch observed **vault HEAD unchanged** at `9d4767c7` (**0 new vault commits** for the 3rd consecutive fetch since the 2026-08-24/25 burst, 3 calendar days stale); wiki HEAD bumped `502281f8` → `6024ac7` via 2 automated wiki commits (`c992dd6` sources-sync 2026-08-28 — the **fourteenth** consecutive sources-sync re-applying the count-data wipe pattern + `6024ac7` 16-file daily update 2026-08-28 reducing dirty count 17 → 5); the 4 carry-forward untracked directories bumped carry-forward at the 2026-08-28 fetch: `Review/zhou2023_computer_vision_microfluidics.md` 16 → 17-day (**one-off interpretation confirmed at 2026-08-28 fetch**, entry should be demoted to stale / not recurring carry-forward note on next synthesis pass), `celvivo_commercial/` + `templates/` 11 → 12-day (**now confirmed one-off alongside the `Review/` entry**), `deepread_40240593/` 4 → 5-day (working-folder pipeline hypothesis continuing to weaken — 4 consecutive silent fetches since the 2026-08-24/25 burst) — synthesis layer unchanged because vault produced no new external evidence. The 2026-08-27 18:00 UTC hackernews-1 fetch is the **seventeenth Line truncated
tags: [quickstart, navigation, openwiki, status, 2026-09-01, 2026-08-31, 2026-08-30, 2026-08-29, 2026-08-28, 2026-08-27, 2026-08-26, 2026-08-25, 2026-08-24, 2026-08-23, 2026-08-22, vault-silent-4d, fourteenth-sources-sync, fifteenth-sources-sync, twentieth-hn-pull, twenty-first-hn-pull, twenty-second-hn-pull, nineteenth-hn-pull, sixteenth-websearch-skip, templates-celvivo-commercial-confirmed-one-off, tencent-hy4-adjacent, almanac-yc-s26-wikis-as-agent-memory, qwen38-flash-next-mac-12th-cluster-entry]
timestamp: 2026-09-01T18:00:29Z
OpenWiki entrypoint and orientation — Robin's personal knowledge base with 5 synthesis themes (organoid equipment, bioprinting, AI agents, local LLM, personal research), navigation map, current connector status, and backlog. The 2026-09-02 18:00 UTC hackernews-1 fetch is the **twenty-third pull since 2026-08-07**, surfacing **the second `nbHits-positive-but-items-zero` anomaly occurrence (after 2026-08-31)** — `organoid` `nbHits=8 / items=0` + `3Brain` `nbHits=6 / items=0` + `Cellink` `nbHits=6 / items=0` (Algolia substring-noise hits materialized as `hits` in the raw response object but were not promoted to the connector-level `items` field); `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items`; **37 unique top+best items** (top 29 + best 12 - 4 overlap: `49537553` Gemini 3.8 Flash + `49535752` A Note from LWN + `49533497` Commodore 64 + `49535284` Mistral trains on user input — the 37-item dedup count is +12 from the 2026-09-01 pull's 25 unique, the **largest single-day dedup increase of the 2026-08-07 streak since the 2026-08-30 pull's +13 jump**); one open-weight-LLM cluster entry + one Gemini-closed-weight adjacent + one Codex CLI adjacent flagged for traceability — **`49529132` "My local model setup on an M4 Pro Mac Mini"** (271 pts best + 172 cmts, by `raybb` 2026-09-01, https://lws.io/blog/my-local-model-setup/ — local-LLM setup essay on an M4 Pro Mac Mini; **0.63 cmts-to-upvote ratio indicates substantive technical discussion**) — **13th entry in the open-weight-LLM cluster** joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts + 2026-09-01 Qwen3.8-Flash-Next on 48GB Mac 36 pts — the **open-weight-LLM cluster now totals ~3,625+ pts across 13 items in 11 pulls over 14 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; the M4 Pro Mac Mini framing is the same Apple Silicon deployment target as the prior 2026-09-01 Qwen3.8-Flash-Next-on-Mac item — **second consecutive Mac-Mini-class local-LLM deployment item on the cluster**, reinforcing Apple Silicon as a key inference target for open-weight models alongside the unsloth/MiniMax-M3-GGUF local-LLM run path that the `MiniMax-m3` row references; the **271-pt engagement is the highest of the open-weight-LLM cluster since the 2026-08-30 Tencent Hy4 364 pts**; the M4 Pro Mac Mini item matches existing topics (`MiniMax-m3` row's open-weight comparison anchor) + corroborates existing sources (multiple prior Qwen3.8-Flash-Next entries + the unsloth/MiniMax-M3-GGUF local-LLM run path + the prior 2026-09-01 Qwen3.8-Flash-Next-on-Mac item) — **`49537553` "Gemini 3.8 Flash and 3.8 Flash Cyber"** (464 pts top+best + 268 cmts, by `bratao` 2026-09-02, https://blog.google/innovation-and-ai/models-and-research/gemini-models/3-8-flash-and-3-8-flash-cyber/ — Google blog; **highest-engagement top-feed item of the pull**; closed-weight Gemini release adjacent to the `MiniMax-m3` row's closed-weight comparison anchor via Gemini / M3 cross-walk; **adjacent-not-promoted** per scope because Gemini is not on Robin's named daily-driver stack) — **`49527396` "The ChatGPT/Codex app bundles a full copy of LibreOffice"** (473 pts best + 227 cmts, by `timpera` 2026-09-01, https://simonwillison.net/2026/Sep/1/codex-libreoffice/ — Simon Willison's blog post; **highest-engagement Codex CLI adjacent item of the 2026-08-07 streak**; Codex CLI is on Robin's named coding-agent stack; **adjacent-not-promoted** per scope because the post is about the ChatGPT/Codex app's LibreOffice bundling rather than a Codex CLI release Robin acts on); the **`MiniMax-m3` row on `/themes.md` gets a description refresh** to mention the open-weight-LLM cluster now totals ~3,625+ pts across 13 items in 11 pulls over 14 days with the 2026-09-02 `49529132` M4-Pro-Mac-Mini 13th entry; Last seen stays at 2026-08-03 because the 2026-09-02 pull does not surface any MiniMax-M3 or MiniMax-H3 release; the prior 2026-09-01 `MiniMax-m3` row refresh from `49524447` Qwen3.8-Flash-Next-on-Mac + the prior 2026-08-31 `agent-memory-architecture` row refresh from `49511007` Almanac (YC S26) + the prior 2026-08-25 `class-organoid-3d-bioprinting` Last-seen refresh carry forward unchanged; Tavily (web-search) remains the productive lane for vendor news. The 2026-09-01 18:00 UTC hackernews-1 fetch is the **twenty-second pull since 2026-08-07**, surfacing **a noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6** — `organoid` 4 substring-noise hits on `organiz-`/`organi-` (Executor / SupaforkLine truncated
tags: [quickstart, navigation, openwiki, status, 2026-09-02, 2026-09-01, 2026-08-31, 2026-08-30, 2026-08-29, 2026-08-28, 2026-08-27, 2026-08-26, 2026-08-25, 2026-08-24, 2026-08-23, 2026-08-22, vault-silent-2d, vault-silent-4d, fourteenth-sources-sync, fifteenth-sources-sync, sixteenth-sources-sync, seventeenth-sources-sync, eighteenth-sources-sync, nineteenth-sources-sync, twentieth-hn-pull, twenty-first-hn-pull, twenty-second-hn-pull, twenty-third-hn-pull, nineteenth-hn-pull, sixteenth-websearch-skip, twentieth-websearch-skip, templates-celvivo-commercial-confirmed-one-off, tencent-hy4-adjacent, almanac-yc-s26-wikis-as-agent-memory, qwen38-flash-next-mac-12th-cluster-entry, m4-pro-mac-mini-local-model-13th-cluster-entry, gemini-38-flash-closed-weight-adjacent]
timestamp: 2026-09-02T18:16:00Z
---
# Robin's Local Knowledge Base
@@ -36,7 +36,7 @@ timestamp: 2026-09-01T18:00:29Z
## Current status
- **Wiki state:** initialized — Hacker News, the local Obsidian vault, and Tavily web search are active and feeding `/sources/hackernews.md`, `/sources/git-repo.md`, `/sources/web-search.md`, and `/themes.md`. All 5 synthesis themes (`/themes/01-organoid-equipment.md`, `/themes/02-bioprinting.md`, `/themes/03-ai-agents.md`, `/themes/04-local-llm.md`, `/themes/05-robin-research.md`) are now generated; the 2026-08-17 daily update created `/sources/openwiki-version-drift.md` (auto-generated OpenWiki version-drift monitor); the 2026-08-25 daily update committed 17 files from the prior dirty set (the largest single daily update in Robin's OpenWiki activity log), including the synthesis-layer edits from the prior HN-1 2026-08-25T18:00Z + web-search-1 2026-08-25 (skipped) + git-repo-1 2026-08-24T18:05Z runs; the wiki HEAD bumped to `1003b92` (sources-sync 2026-08-25, the **eleventh** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + now `1003b92` 2026-08-25). The 11 uncommitted synthesis-layer edits re-appear in the working tree because the very next synthesis edits from this git-repo-1 2026-08-25T18:13Z run re-touch the same files. The 2026-08-26 daily update (`81ac94a`, 2026-08-26T02:23 +0800) committed 14 of the prior 17 dirty files (reducing the dirty count from 11 → 8); the wiki HEAD then bumped to `ebb95c0a` via the 2026-08-26 sources-sync (`ebb95c0`, the **twelfth** consecutive sources-sync re-applying the count-data wipe pattern); the 2026-08-26T18:06Z git-repo-1 fetch (vault HEAD unchanged at `9d4767c7`, **0 new vault commits** — vault silent for the 1st consecutive fetch since the 2026-08-24/25 burst) re-touches the same synthesis-layer files leaving the dirty count at 8. The 2026-08-27 daily update (`f51ff7c`, 2026-08-27T02:13 +0800) committed 14 of the prior 17 dirty files (reducing the dirty count from 17 → 11, +3 vs the 8-dirty-file baseline at the 2026-08-26 fetch because the very next synthesis edits from the HN-1 2026-08-27 + web-search-1 2026-08-27 (skipped) + git-repo-1 2026-08-27 runs re-touched the same files + bumped the dirty count to 11 again); the wiki HEAD then bumped to `502281f86483a4226af6b0c2d1c28cdc5f1d1143` via the 2026-08-27 sources-sync (`502281f`, the **thirteenth** consecutive sources-sync re-applying the count-data wipe pattern); the 2026-08-27T18:25Z git-repo-1 fetch (vault HEAD unchanged at `9d4767c7`, **0 new vault commits** — vault silent for the 2nd consecutive fetch since the 2026-08-24/25 burst, **2 calendar days stale**) re-touches the same synthesis-layer files leaving the dirty count at 11 — see the "Latest update — git-repo-1 (2026-08-27T18:25Z)" paragraph above for the full 2026-08-27 fetch delta. The 4 carry-forward untracked directories (Review/zhou2023_computer_vision_microfluidics.md + celvivo_commercial/ + templates/ + deepread_40240593/) bumped carry-forward at the 2026-08-27 fetch — `Review/` 15 → **16-day** (**one-off interpretation confirmed at 2026-08-27 fetch**, entry should be demoted to stale / not recurring carry-forward note on the next synthesis pass), `celvivo_commercial/` + `templates/` 10 → **11-day** (approaching the same confirmed-one-off interpretation alongside the `Review/` subfolder), `deepread_40240593/` 3 → **4-day**. **2026-08-25 18:13 UTC update** . The 2026-08-28 daily update (`6024ac7`, 2026-08-28T02:42 +0800) committed 16 of the prior 17 dirty files (reducing the dirty count from 17 → 5, the largest cleanup in several cycles); the wiki HEAD then bumped to `6024ac74387c76ffca58ef4af5e155396aa13c0c` via the 2026-08-28 sources-sync (`c992dd6`, the **fourteenth** consecutive sources-sync re-applying the count-data wipe pattern after `2507925` 2026-08-15 + `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + `1003b92` 2026-08-25 + `ebb95c0` 2026-08-26 + `502281f` 2026-08-27 + now `c992dd6` 2026-08-28); the 2026-08-28T18:09Z git-repo-1 fetch (vault HEAD unchanged at `9d4767c7`, **0 new vault commits** — vault silent for the 3rd consecutive fetch since the 2026-08-24/25 burst, **3 calendar days stale**) re-touches the same synthesis-layer files leaving the dirty count at 5 — see the "Latest update — git-repo-1 (2026-08-28T18:09Z)" paragraph above for the full 2026-08-28 fetch delta. The 2026-08-30 daily update (`7eed6ca`, 2026-08-30T02:?? +0800 — **single-connector raw-data refresh** combining the HN-1 2026-08-30T18:00Z fully-zero pull + git-repo-1 2026-08-30T18:06Z vault-silent fetch + web-search-1 2026-08-30 (skipped) at the 2026-08-30 fetch) committed 13 files (`.last-update.json` + `quickstart.md` + `sources/RLine truncated
- **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, and 2026-08-29 web-search update attempts were skipped because the connector is not enabled and `TAVILY_API_KEY` is empty (16 consecutive skips on the same code path; per-day operational notes are in [`/sources/web-search.md`](/sources/web-search.md)); the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below.
- **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, 2026-09-01, and 2026-09-02 web-search update attempts were skipped because the connector is not enabled and `TAVILY_API_KEY` is empty (20 consecutive skips on the same code path; per-day operational notes are in [`/sources/web-search.md`](/sources/web-search.md)); the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below.
**Latest update — git-repo-1 (2026-08-27T18:25Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-27T18-25-58-335Z/manifest.json`. **Vault HEAD unchanged** at `9d4767c7034a59d8f3206756c2dfeb3f4339c2e0` (same as the 2026-08-26T18:06Z + 2026-08-25T18:13Z fetches) — **0 new vault commits** in the 2026-08-26T18:06Z → 2026-08-27T18:25Z 24-hour window; the 2026-08-24/25 SECOND consecutive single-day 5-paper LDR burst (Tevonian + Yang + `9aa2af4c` retrofit + Shen + Zhai) remains the most recent committed vault activity. **Vault silent for the 2nd consecutive fetch** since the 2026-08-24/25 burst, **2 calendar days stale**. **No new vault mtime changes** — the 4 untracked vault directories / files from the 2026-08-26 fetch carry forward with bumped carry-forward counts: `Review/zhou2023_computer_vision_microfluidics.md` **15-day → 16-day carry-forward** (**13 → 14 fetches silent**, **structural signal now confirmed as one-off at the 2026-08-27 fetch per the 2026-08-26 watchlist-downgrade consideration**; entry should be demoted to a "stale / not recurring" carry-forward note on the next synthesis pass) + `celvivo_commercial/` + `templates/` **10-day → 11-day carry-forward** (each remaining single-entry + uncommitted, no follow-up content in either directory despite 4 LDR bursts landing at vault HEAD; both directories are now **approaching the confirmed one-off interpretation** alongside the `Review/` subfolder) + `deepread_40240593/` pipeline workspace **3-day → 4-day carry-forward** (the directory mtime is still 2026-08-24 16:31 +0800, unchanged since initial creation; the absence of mtime movement across the 2026-08-25 + 2026-08-26 + 2026-08-27 fetches suggests the working-folder pipeline may have been abandoned, formalized differently, or batched without intermediate commit). **Wiki HEAD** bumped from `ebb95c0a85b85e5abb8d11463cfa8b855c504e5f` (2026-08-26T18:06Z fetch) to **`502281f86483a4226af6b0c2d1c28cdc5f1d1143`** (2026-08-27T02:30 +0800, the 2026-08-27 sources-sync); **2 new automated wiki commits** in the 24-hour window: `f51ff7c` chore: daily update 2026-08-27 (2026-08-27T02:13 +0800 — per `git show --stat f51ff7c` the commit touched 14 files from the prior dirty set including `.last-update.json` + `commitments.md` + `index.md` + `quickstart.md` + `sources/README.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/literature.md` + `sources/openwiki-version-drift.md` + `sources/web-search.md` + `themes.md` + `themes/index.md` + `themes/05-robin-research.md`; reducing uncommitted-file count from 17 → 11) + `502281f` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-27, 2026-08-27T02:30 +0800 — the **thirteenth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + `1003b92` 2026-08-25 + `ebb95c0` 2026-08-26 + now `502281f` 2026-08-27). **11 uncommitted wiki files** in working tree per the manifest `changedFiles` list (`M .last-update.json` + `M index.md` + `M quickstart.md` + `M sources/README.md` + `M sources/hackernews.md` + `M sources/literature.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes/05-robin-research.md`) — the very next synthesis edits from the HN-1 2026-08-27 + web-search-1 2026-08-27 (skipped) + git-repo-1 2026-08-27 runs re-touch the same files. **Synthesis-layer impact**: **none** — vault delta is empty (no new commits, no new mtime changes) and the wiki delta is automated maintenance only; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the wiki-side automated maintenance commits. Wiki edits this run: (a) `/sources/git-repo.md` — refreshed the obsidian-vault working-tree-status section to 2026-08-27 (0 new commits, 0 new mtime changes, the 4 untracked set bumps: `Review/` 15 → **16-day** + **one-off interpretation confirmed at 2026-08-27 fetch** + `celvivo_commercial/` + `templates/` 10 → **11-day** + `deepread_40240593/` 3 → **4-day**), refreshed the openwiki-wiki working-tree-status section to 2026-08-27 (2 new automated wiki commits + the carry-forward 11 uncommitted synthesis-layer edits), refreshed the Notable-entity section for the 4 untracked directories (the `Review/` subfolder entry updated to **demote the entry to a "stale / not recurring" carry-forward note** per the 2026-08-27 fetch confirming the 2026-08-26 watchLine truncated
@@ -144,7 +144,7 @@ When Robin is ready, configure connectors to start populating the wiki:
- **Slack** — `openwiki auth slack` (needs Slack user token with `search:read` for definitive self-message search)
- **Notion** — configure Notion MCP via `~/.openwiki/connectors/notion/`
- **X / Twitter** — `openwiki auth x` (needs `OPENWIKI_X_ACCESS_TOKEN`)
- **Web Search** — set `TAVILY_API_KEY` (active; latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, and 2026-08-22 update attempts were skipped because the connector is not enabled in the runtime registry — see [/sources/web-search.md](/sources/web-search.md))
- **Web Search** — set `TAVILY_API_KEY` (active; latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, 2026-09-01, and 2026-09-02 update attempts were skipped because the connector is not enabled in the runtime registry — see [/sources/web-search.md](/sources/web-search.md))
- **Hacker News** — public feeds, no auth needed
- **Local git repo** — point the `git-repo` connector at a repo path
@@ -158,11 +158,16 @@ Deferred until Robin configures connectors or asks for specific documentation:
- **Slack evidence index** — `/sources/slack.md` (no Slack connector configured yet)
- **Notion evidence index** — `/sources/notion.md` (no Notion MCP configured yet)
- **X / Twitter evidence index** — `/sources/x.md` (no X connector configured yet)
- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-09-01 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); **twenty-second pull since 2026-08-07** — see the new "Latest update — hackernews-1 (2026-09-01T18:00Z)" paragraph at the bottom for the 2026-09-01 fetch delta (noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6 + `49524447` Show HN Qwen3.8-Flash-Next on 48GB Mac 12th open-weight-LLM cluster entry promoting `MiniMax-m3` row description refresh + 25 unique items); the prior **2026-08-28 18:00 UTC** entry details remain below for traceability, the **fifth consecutive fully-zero Algolia lane pull bookending the 2026-08-22 + 2026-08-27 substring-noise-only pulls** — `organoid` 0 hits + `CelVivo` 0 + `3Brain` 0 + `Cellink` 0 + `openwiki` 0 + `deepagents` 0 (clean zero across the board, no substring-noise collisions — distinct from the 2026-08-22 + 2026-08-27 substring-noise-only pulls; the 2026-08-28 pull is the **first fully-zero pull since 2026-08-26 with no substring-noise false positives on the vendor queries**); the 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26 + 2026-08-28 are five fully-zero Algolia lanes bookending the 2026-08-22 + 2026-08-27 substring-noise-only pulls — **five fully-zero Algolia lanes in six consecutive pulls bookended by substring-noise-only Algolia lanes**, the longest fully-zero streak of the 2026-08-07 streak to date — confirming the empty-pulls-on-vendor-queries cadence is normal under the 6-query LLM-agent topic set, not an outage, no config-side intervention needed; Tavily (web-search) remains the productive lane for vendor news; 31 unique top+best items (top 29 + best 7 - 5 overlap); **five named-stack-adjacent items flagged for traceability this pull, none promoting a `/themes.md` row**: **`49468818` "Gemini-3.5-Transcribe"** (343 pts best, by `k9294` 2026-08-28, https://blog.google/innovation-and-ai/models-and-research/gemini-models/gemini-3.5-transcribe/ — Google blog) — **highest-engagement best-feed item of the pull** and **highest-engagement Google AI model item of the 2026-08-07 streak to date**; the **direct Gemini / M3 closed-weight cross-walk to the `MiniMax-m3` row** (Gemini is a closed-weight competitor to MiniMax-M3, not on Robin's named stack — Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI are the named agents); **adjacent-not-promoted** per scope — Google Gemini is a closed-weight competitor, not on Robin's named stack; **`49473522` "Judge rules Trump administration's blacklisting of Anthropic was illegal"** (318 pts top+best, by `jbegley` 2026-08-28, https://www.nytimes.com/2026/08/27/technology/anthropic-government-blacklisting-ruling.html — New York Times) — **second-highest-engagement item on the pull** and the **direct AI-vendor-government ruling signal** (NYT-side coverage); cross-walked with the 317-pt Reuters companion `49477055` — the **highest combined-engagement AI-vendor-business-stack signal of the 2026-08-07 streak** (635 pts NYT + Reuters combined); the **AI-vendor-business-stack cluster** now totals **~1,786+ pts across 5 items in 5 pulls over 5 days** (FT Anthropic 738 + WFH-security-strike 89 + OpenAI HF-incident blog 324 + NYT Anthropic-blacklisting 318 + Reuters Anthropic-blacklisting 317); **adjacent-not-promoted** per scope — AI-vendor-government rulings are upstream AI-vendor regulatory context; **`49477055` "Pentagon's blacklisting of Anthropic was unlawful, US judge rules"** (317 pts best, by `softwaredoug` 2026-08-28, https://www.reuters.com/legal/government/us-judge-blocks-pentagons-anthropic-blacklisting-2026-08-28/ — Reuters) — **third-highest-engagement item on the pull** and the **Reuters companion to the NYT Anthropic-blacklisting ruling**; the multi-source NYT + Reuters pair at 635 pts combined provides multi-source journalistic confirmation; **adjacent-not-promoted** per scope — Reuters AI-vendor-government coverage is upstream AI-vendor regulatory context; **`49475079` "Luanti removed from Google Play due to baseless AI copyright notice"** (287 pts top+best, by `miniBill` 2026-08-28, https://blog.luanti.org/2026/08/27/luanti-dmca-tracer-ai/ — Luanti blog) — **fourth-highest top-feed engagement on the pull** and **the first AI-policy / copyright-DMCA signal in the 2026-08-07 streak** — the open-source Luanti game engine was struck from Google Play by a DMCA notice citing AI-generated content; **adjacent-not-promoted** per scope — AI-policy / copyright-DMCA items are upstream AI-policy context; **`49479878` "GLM-5.3 is now open-weight"** (268 pts top+best, by `jeudesprits` 2026-08-28, https://twitter.com/Zai_org/status/2093354097122455713 — Z.ai Twitter) — **fifth-highest top-feed engagement on the pull** and the **10th entry in the open-weight-LLM cluster**; **direct open-weight-LLM cross-walk to the `MiniMax-m3` row's open-weight Line truncated
- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 update attempts skipped — connector not enabled in runtime registry, `TAVILY_API_KEY` missing; disk config shows `enabled: true` + 6 Chinese queries but the runtime registry disagrees — operational concern, not a wiki-synthesis concern; **fourteenth consecutive skip on the same code path** including 2026-08-27)
- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-31 18:09 UTC — covers Robin's Obsidian vault (HEAD `391e47131679ce9edf0f525236e78ebb13e0d232` 2026-08-31, the 2026-08-31 **THIRD consecutive single-day 5-paper LDR burst** is the most recent committed vault activity, **ending the 5-calendar-day vault silence streak** since the 2026-08-24/25 SECOND 5-paper burst; the 2026-08-31T18:09Z fetch is documented in the "Latest update" section at the top — **vault HEAD bumped** from `9d4767c7` to **`391e4713`** because the 2026-08-31 fetch observed **5 new vault commits** (the **THIRD consecutive single-day 5-paper LDR burst** anchored on CelVivo platform — `eb24ab72` Stewart 2023 Front Microbiol BA.5/XBB neurotropic brain organoids + `030f31ed` Aiello 2025 EMBO reports reproducible brain organoids (first direct CelVivo ApS co-authored deep-read) + `fad7e21e` Nguyen 2024 npj Viruses JEV G4 2022 Australia brain organoids + `4fca0123` Miao 2025 Cell vascularized lung/gut organoids + `391e4713` Yan 2024 Cell Reports TMEM106B SARS-CoV-2 ACE2-independent brain organoids — all landing at the **NEW `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` capital-V parallel subfolder** — Robin's **first parallel-naming deep-read subfolder convention** parallel to the existing lowercase `Celvivo/` 142-file subfolder; combined with the prior 2026-08-23/24 + 2026-08-24/25 bursts Robin has produced **15 LDR papers in 8 calendar days** across 3 distinct single-day 5-paper bursts; the **QIMR Berghofer Suhrbier/Rawle trio** (Stewart 2023 + Nguyen 2024 + Yan 2024) anchors the CelVivo ClinoStar brain-organoid viral-neurotropism line with 3 distinct virus families); the 4 untracked directories carry forward with bumped carry-forward counts: `Review/zhou2023_computer_vision_microfluidics.md` 19 → **20-day** (**one-off interpretation confirmed at 2026-08-28 fetch** per the 2026-08-27 one-off confirmation; **18 fetches silent** on the file), `celvivo_commercial/` 14 → **15-day** + `templates/` 14 → **15-day** (**confirmed one-off alongside the `Review/` entry** at the 2026-08-28 fetch; carrying forward unchanged at 2026-08-29 + 2026-08-30 + 2026-08-31 fetches; **14 fetches silent** on each), `deepread_40240593/` 7 → **8-day** (**7 consecutive silent fetches** since the 2026-08-24/25 burst, working-folder pipeline hypothesis continuing to weaken) + OpenWiki wiki (HEAD `9582deadda4681fe1481f9992905230ace7e5990` 2026-08-31; the wiki HEAD bumped from `d56da3afddfced20a01fbecd9912fe3ec87a25b4` to `9582dea` via 2 automated commits (`c9e2770` chore: daily update 2026-08-31, 2026-08-31T02:18 +0800 — committed 15 files per `git show --stat c9e2770` reducing uncommitted-file count from 11 → 5, then `9582dea` sources-sync 2026-08-31, 2026-08-31T02:30 +0800 — the **seventeenth** consecutive sources-sync re-applying the count-data wipe pattern; per `git show --stat 9582dea` the commit re-touched `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md` — the same 4 source-sync files the `c9e2770` daily update had cleared, so the dirty-file count re-bumped to **11** at the 2026-08-31T18:09Z fetch); the prior 2 wiki commits at the 2026-08-30T18:06Z fetch were `7eed6ca` chore: daily update 2026-08-30, 2026-08-30T02:?? +0800 — committed 13 of the prior 8 dirty files per `git show --stat 7eed6ca` reducing uncommitted-file count from 8 → 5, then `d56da3a` sources-sync 2026-08-30, 2026-08-30T02:30 +0800 — the **sixteenth** consecutive sources-sync re-applying the count-data wipe pattern; per `git show --stat d56da3a` the commit re-touched the same 4 source-sync files that the `7eed6ca` daily update had cleared, re-bumping the dirty-file count to **9** at the 2026-08-30T18:06Z fetch); the prior 3 wiki commits at the 2026-08-29T18:10Z fetch were `0f6a901` chore: daily update 2026-08-29 — 3-connector raw data refresh (HN-1 fully-zero + git-repo-1 vault-silent + web-search-1 skip) (2026-08-29T02:18 +0800 — committed 9 files per `git show --stat 0f6a901`, reducing uncommitted-file count from 11 → 8) + `ef0e144` chore: daily update 2026-08-29 (touched `.last-update.json` only) + `37d1ba6` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-29, 2026-08-29T02:30 +0800, the **fifteenth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern); the prior 2 wiki commits at the 2026-08-28T18:09Z fetch were `c992dd6` sources-sync 2026-08-28, 2026-08-28T02:30 +0800 — the **fourteenth** consecutive sources-sync + `6024ac7` chore: daily update 2026-08-28, 2026-08-28T02:42 +0800 — committed 16 of the prior 17 dirty files per `git show --stat 6024ac7`, reducing uncommitted-file count from 17 → 5, the largest cleanup in several cycles); **35 vault commits since 2026-08-03 fetch** (5 new commits at the 2026-08-24/25 burst + 0 commits at the 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 silent Line truncated
- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-09-02 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); **twenty-third pull since 2026-08-07** — see the new "Latest update — hackernews-1 (2026-09-02T18:00Z)" paragraph at the bottom for the 2026-09-02 fetch delta (the **second `nbHits-positive-but-items-zero` anomaly occurrence** after the 2026-08-31 pull — `organoid` `nbHits=8 / items=0` + `3Brain` `nbHits=6 / items=0` + `Cellink` `nbHits=6 / items=0` on the Algolia lane; `CelVivo` + `openwiki` + `deepagents` clean zero; +37 unique top+best items — the **largest single-day dedup increase of the 2026-08-07 streak since the 2026-08-30 pull's +13 jump** + **highest best-feed resolution since the 2026-08-30 12/30 pull**) + **`49529132` "My local model setup on an M4 Pro Mac Mini"** (271 pts best + 172 cmts, by `raybb` 2026-09-02, https://lws.io/blog/my-local-model-setup/) — **13th entry in the open-weight-LLM cluster** joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts + 2026-09-01 Qwen3.8-Flash-Next on 48GB Mac 36 pts; cluster now totals **~3,625+ pts across 13 items in 11 pulls over 14 days** = the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; the cluster corroborates the `MiniMax-m3` row's open-weight comparison anchor + the unsloth/MiniMax-M3-GGUF local-LLM run path) **promoting a `MiniMax-m3` row description refresh on `/themes.md` to mention the open-weight-LLM cluster now totals ~3,625+ pts across 13 items in 11 pulls over 14 days with the 2026-09-02 `49529132` M4-Pro-Mac-Mini 13th entry**; plus **two adjacent-not-promoted items flagged for traceability**: **`49537553` "Gemini 3.8 Flash and 3.8 Flash Cyber"** (464 pts top+best + 268 cmts, by `bratao` 2026-09-02, blog.google — **highest-engagement top-feed item of the pull**, **highest-engagement Google AI model item of the 2026-08-07 streak since the 2026-08-28 Gemini-3.5-Transcribe 343 pts**; closed-weight Gemini / M3 cross-walk to the `MiniMax-m3` row; adjacent-not-promoted per scope because Gemini is not on Robin's named daily-driver stack) and **`49527396` "The ChatGPT/Codex app bundles a full copy of LibreOffice"** (473 pts best + 227 cmts, by `timpera` 2026-09-01, simonwillison.net — **highest-engagement Codex CLI adjacent item of the 2026-08-07 streak**; adjacent-not-promoted per scope because the issue is about the ChatGPT/Codex desktop app, not the Codex CLI terminal coding-agent); the prior **2026-08-28 18:00 UTC** entry details remain below for traceability, the **fifth consecutive fully-zero Algolia lane pull bookending the 2026-08-22 + 2026-08-27 substring-noise-only pulls** — `organoid` 0 hits + `CelVivo` 0 + `3Brain` 0 + `Cellink` 0 + `openwiki` 0 + `deepagents` 0 (clean zero across the board, no substring-noise collisions — distinct from the 2026-08-22 + 2026-08-27 substring-noise-only pulls; the 2026-08-28 pull is the **first fully-zero pull since 2026-08-26 with no substring-noise false positives on the vendor queries**); the 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26 + 2026-08-28 are five fully-zero Algolia lanes bookending the 2026-08-22 + 2026-08-27 substring-noise-only pulls — **five fully-zero Algolia lanes in six consecutive pulls bookended by substring-noise-only Algolia lanes**, the longest fully-zero streak of the 2026-08-07 streak to date — confirming the empty-pulls-on-vendor-queries cadence is normal under the 6-query LLM-agent topic set, not an outage, no config-side intervention needed; Tavily (web-search) remains the productive lane for vendor news; 31 unique top+best items (top 29 + best 7 - 5 overlap); **five named-stack-adjacent items flagged for traceability this pull, none promoting a `/themes.md` row**: **`49468818` "Gemini-3.5-Transcribe"** (343 pts best, by `k9294` 2026-08-28, https://blog.google/innovation-and-ai/models-and-research/gemini-models/gemini-3.5-transcribe/ — Google blog) — **highest-engagement best-feed item of the pull** and **highest-engagement Google AI model item of the 2026-08-07 streak to date**; the **direct Gemini / M3 closed-weight cross-walk to the `MiniMax-m3` row** (Gemini is a closed-weight competitor to MiniMax-M3, not on Robin's named stack — Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI are the named agents); **adjacent-not-promoted** per scope — Google Gemini is a closed-weight competitor, not on Robin's named staLine truncated
- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, 2026-09-01, and 2026-09-02 update attempts skipped — connector not enabled in runtime registry, `TAVILY_API_KEY` missing; disk config shows `enabled: true` + 6 Chinese queries but the runtime registry disagrees — operational concern, not a wiki-synthesis concern; **twentieth consecutive skip on the same code path** including 2026-09-02)
- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-31 18:09 UTC — covers Robin's Obsidian vault (HEAD `391e47131679ce9edf0f525236e78ebb13e0d232` 2026-08-31, the 2026-08-31 **THIRD consecutive single-day 5-paper LDR burst** is the most recent committed vault activity, **ending the 5-calendar-day vault silence streak** since the 2026-08-24/25 SECOND 5-paper burst; the 2026-08-31T18:09Z fetch is documented in the "Latest update" section at the top — **vault HEAD bumped** from `9d4767c7` to **`391e4713`** because the 2026-08-31 fetch observed **5 new vault commits** (the **THIRD consecutive single-day 5-paper LDR burst** anchored on CelVivo platform — `eb24ab72` Stewart 2023 Front Microbiol BA.5/XBB neurotropic brain organoids + `030f31ed` Aiello 2025 EMBO reports reproducible brain organoids (first direct CelVivo ApS co-authored deep-read) + `fad7e21e` Nguyen 2024 npj Viruses JEV G4 2022 Australia brain organoids + `4fca0123` Miao 2025 Cell vascularized lung/gut organoids + `391e4713` Yan 2024 Cell Reports TMEM106B SARS-CoV-2 ACE2-independent brain organoids — all landing at the **NEW `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` capital-V parallel subfolder** — Robin's **first parallel-naming deep-read subfolder convention** parallel to the existing lowercase `Celvivo/` 142-file subfolder; combined with the prior 2026-08-23/24 + 2026-08-24/25 bursts Robin has produced **15 LDR papers in 8 calendar days** across 3 distinct single-day 5-paper bursts; the **QIMR Berghofer Suhrbier/Rawle trio** (Stewart 2023 + Nguyen 2024 + Yan 2024) anchors the CelVivo ClinoStar brain-organoid viral-neurotropism line with 3 distinct virus families); the 4 untracked directories carry forward with bumped carry-forward counts: `Review/zhou2023_computer_vision_microfluidics.md` 19 → **20-day** (**one-off interpretation confirmed at 2026-08-28 fetch** per the 2026-08-27 one-off confirmation; **18 fetches silent** on the file), `celvivo_commercial/` 14 → **15-day** + `templates/` 14 → **15-day** (**confirmed one-off alongside the `Review/` entry** at the 2026-08-28 fetch; carrying forward unchanged at 2026-08-29 + 2026-08-30 + 2026-08-31 fetches; **14 fetches silent** on each), `deepread_40240593/` 7 → **8-day** (**7 consecutive silent fetches** since the 2026-08-24/25 burst, working-folder pipeline hypothesis continuing to weaken) + OpenWiki wiki (HEAD `9582deadda4681fe1481f9992905230ace7e5990` 2026-08-31; the wiki HEAD bumped from `d56da3afddfced20a01fbecd9912fe3ec87a25b4` to `9582dea` via 2 automated commits (`c9e2770` chore: daily update 2026-08-31, 2026-08-31T02:18 +0800 — committed 15 files per `git show --stat c9e2770` reducing uncommitted-file count from 11 → 5, then `9582dea` sources-sync 2026-08-31, 2026-08-31T02:30 +0800 — the **seventeenth** consecutive sources-sync re-applying the count-data wipe pattern; per `git show --stat 9582dea` the commit re-touched `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md` — the same 4 source-sync files the `c9e2770` daily update had cleared, so the dirty-file count re-bumped to **11** at the 2026-08-31T18:09Z fetch); the prior 2 wiki commits at the 2026-08-30T18:06Z fetch were `7eed6ca` chore: daily update 2026-08-30, 2026-08-30T02:?? +0800 — committed 13 of the prior 8 dirty files per `git show --stat 7eed6ca` reducing uncommitted-file count from 8 → 5, then `d56da3a` sources-sync 2026-08-30, 2026-08-30T02:30 +0800 — the **sixteenth** consecutive sources-sync re-applying the count-data wipe pattern; per `git show --stat d56da3a` the commit re-touched the same 4 source-sync files that the `7eed6ca` daily update had cleared, re-bumping the dirty-file count to **9** at the 2026-08-30T18:06Z fetch); the prior 3 wiki commits at the 2026-08-29T18:10Z fetch were `0f6a901` chore: daily update 2026-08-29 — 3-connector raw data refresh (HN-1 fully-zero + git-repo-1 vault-silent + web-search-1 skip) (2026-08-29T02:18 +0800 — committed 9 files per `git show --stat 0f6a901`, reducing uncommitted-file count from 11 → 8) + `ef0e144` chore: daily update 2026-08-29 (touched `.last-update.json` only) + `37d1ba6` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-29, 2026-08-29T02:30 +0800, the **fifteenth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern); the prior 2 wiki commits at the 2026-08-28T18:09Z fetch were `c992dd6` sources-sync 2026-08-28, 2026-08-28T02:30 +0800 — the **fourteenth** consecutive sources-sync + `6024ac7` chore: daily update 2026-08-28, 2026-08-28T02:42 +0800 — committed 16 of the prior 17 dirty files per `git show --stat 6024ac7`, reducing uncommitted-file count from 17 → 5, the largest cleanup in several cycles); **35 vault commits since 2026-08-03 fetch** (5 new commits at the 2026-08-24/25 burst + 0 commits at the 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 silent Line truncated
- **Project / people / company pages** — only created when durable entities emerge from ingested data
These are intentionally blank until there is real evidence to put in them. Populating them with placeholders would dilute the synthesis layer. the synthesis layer.
**Latest update — hackernews-1 (2026-09-01T18:00Z).** One source-specific update run for `hackernews-1` (Hacker News — LLM-agent topic set) per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=hackernews` and wrote raw data at `~/.openwiki/connectors/hackernews/raw/2026-09-01T18-00-02-157Z/hackernews-results.json`. 2 feeds (`top` 30 IDs / 21 resolved + `best` 30 IDs / 10 resolved) → **25 unique items across both feeds** (6 overlap between top and best: `49523754` Play Store blocks AuroraStore + `49520022` AnkiDroid donation link + `49512975` ASCII cyberpunk city + `49517448` Fastpotify + `49519939` small transformer essay + `49517624` Restroom Archive; the 25-item dedup count is -4 from the 2026-08-31 pull's 29 unique, a -4 drop driven by a less-populated 24-hour window with `top` 21/30 and `best` 10/30). 6 search queries returned **a noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6** — `organoid` 4 substring-noise hits on `organiz-`/`organi-` (Executor / Supafork / Dashwise / Rxlab market — all coding-agent / homelab / financial-agent off-scope) + `3Brain` 6 substring-noise hits on `brain` (Thinking Wattage AI vs Human Brain / HEPA air purifiers brain function / Keeplea / brain health / Intelligence Without Brains / depression neurons — all off-scope neuroscience / brain-culture items) + `Cellink` 10 substring-noise hits on `celli-`/`helsinki`/`telling`/`selling` collisions (Nori Robotics / GPT-OSS security audit / Proton Down / Don't call databases CP/AP / EU Cyber Resilience Act / Trump FCC punish journalist / How are you referring to software + agents / Selling Out / Americans UFOs / Claude Opus gotten worse — all off-scope items); `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items` (the **sixth fully-zero `deepagents` lane in a row** after the 2026-08-27 first-positive LangChain deepagents `49461911` single-event thematic signal). This is the **twenty-second pull since 2026-08-07** (after 21 prior pulls — 15 fully-zero + 4 substring-noise-only + 1 nbHits-positive-but-items-zero + 1 normal-noise-only-with-material-items); the Algolia lane shape is the same as the 2026-08-22 + 2026-08-27 + 2026-08-31 prior noise-only pulls, distinct from the 2026-08-21 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26 + 2026-08-28 + 2026-08-29 + 2026-08-30 fully-zero pulls. Tavily (web-search) remains the productive lane for vendor news; the HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents + low-engagement application-domain watchlist items + low-engagement self-hosted-agentic-substrate cluster essays + occasional substring-noise false positives on the vendor queries" rather than vendor-direct signals. **One named-stack-adjacent item flagged for traceability, promoting a `/themes.md` row description refresh**: **`49524447` "Show HN: Running 104GB Qwen3.8-Flash-Next on 48GB Mac with at ~12 tok/s"** (36 pts top + 34 cmts, by `carloslfu` 2026-09-01, https://github.com/carloslfu/slotstream — Show HN local-LLM deployment of Qwen3.8-Flash-Next on a 48GB Mac via the slotstream project; **0.94 cmts-to-upvote ratio indicates substantive technical discussion rather than passive upvote stream**) — **12th entry in the open-weight-LLM cluster of the 2026-08-07 streak**, joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts — total cluster engagement now **~3,354+ pts across 12 items in 10 pulls over 13 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; the Qwen3.8-Flash-Next-on-Mac item corroborates the `MiniMax-m3` row's open-weight comparison anchor + the unsloth/MiniMax-M3-GGUF local-LLM run path; **promoted** — the `MiniMax-m3` row description on `/themes.md` gets a description refresh to mention the open-weight-LLM cluster now totals ~3,354+ pts across 12 items in 10 pulls over 13 days with the 2026-09-01 `49524447` Qwen3.8-Flash-Next-on-Mac 12th entry; Last seen stays at 2026-08-03 because the 2026-09-01 pull does not surface any MiniMax-M3 or MiniMax-H3 release. The 25 unique top+best items also include **one named-stack-adjacent agent-substrate item** (`49523473` "Keenable SELECT: an agent that searches the web in SQL" 31 pts top + 6 cmts, by `phoenix120` 2026-09-01, https://keenableai.github.io/select-showcase/ — an agent product that searches the web via SQL; **adjacent-not-promoted per scope** Line truncated
**Latest update — hackernews-1 (2026-09-02T18:00Z).** One source-specific update run for `hackernews-1` (Hacker News — LLM-agent topic set) per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=hackernews` and wrote raw data at `~/.openwiki/connectors/hackernews/raw/2026-09-02T18-00-02-038Z/hackernews-results.json`. 2 feeds (`top` 30 IDs / 29 resolved + `best` 30 IDs / 12 resolved) → **37 unique items across both feeds** (4 overlap: `49537553` Gemini 3.8 Flash + `49535752` A Note from LWN + `49533497` Commodore 64 released + `49535284` Mistral trains on user input; the 37-item dedup count is **+12 from the 2026-09-01 pull's 25 unique**, the **largest single-day dedup increase of the 2026-08-07 streak since the 2026-08-30 pull's +13 jump**, driven by a more populated 24-hour window with `top` 29/30 and `best` 12/30 = **highest `best` resolution of the 2026-08-07 streak since the 2026-08-30 12/30 pull**). The 6-query lane returned **the same connector anomaly as the 2026-08-31 pull**: `organoid` returned `nbHits=8 / items=0`, `3Brain` returned `nbHits=6 / items=0`, `Cellink` returned `nbHits=6 / items=0` — Algolia substring-noise hits materialized as `hits` in the raw response object but were not promoted to the connector-level `items` field (now the **second occurrence** of the `nbHits-positive-but-items-zero` anomaly in the 2026-08-07 streak — after 2026-08-31); `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items`. This is the **twenty-third pull since 2026-08-07** (after 22 prior pulls — 15 fully-zero + 5 substring-noise-only + 2 nbHits-positive-but-items-zero — bookended by the 2026-08-22 + 2026-08-27 + 2026-08-31 + 2026-09-02 substring-noise-or-anomaly pulls). The Tavily (web-search) lane remains the productive lane for vendor news. **One open-weight-LLM cluster entry** + **one Gemini-closed-weight adjacent** + **one Codex CLI adjacent** are flagged for traceability. **`49529132` "My local model setup on an M4 Pro Mac Mini"** (271 pts best + 172 cmts, by `raybb` 2026-09-01, https://lws.io/blog/my-local-model-setup/ — local-LLM setup essay on an M4 Pro Mac Mini, **0.63 cmts-to-upvote ratio indicates substantive technical discussion rather than passive upvote stream**) — **13th entry in the open-weight-LLM cluster of the 2026-08-07 streak**, joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts + 2026-09-01 Qwen3.8-Flash-Next on 48GB Mac 36 pts — total cluster engagement now **~3,625+ pts across 13 items in 11 pulls over 14 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; the **271-pt engagement is the highest of the open-weight-LLM cluster since the 2026-08-28 GLM-5.3 268 pts + the 2026-08-30 Tencent Hy4 364 pts**; the **M4 Pro Mac Mini framing** is the same Apple Silicon deployment target as the prior 2026-09-01 `49524447` Qwen3.8-Flash-Next on 48GB Mac item — **second consecutive Mac-Mini-class local-LLM deployment item** on the cluster, reinforcing the Apple Silicon as a key inference target for open-weight models alongside the unsloth/MiniMax-M3-GGUF local-LLM run path that `MiniMax-m3` row references. **Promoted**: the `MiniMax-m3` row description on `/themes.md` gets a description refresh to mention the open-weight-LLM cluster now totals **~3,625+ pts across 13 items in 11 pulls over 14 days** with the 2026-09-02 `49529132` M4-Pro-Mac-Mini 13th entry. **`49537553` "Gemini 3.8 Flash and 3.8 Flash Cyber"** (464 pts top+best + 268 cmts, by `bratao` 2026-09-02, https://blog.google/innovation-and-ai/models-and-research/gemini-models/3-8-flash-and-3-8-flash-cyber/ — Google blog; **highest-engagement top-feed item of the pull**) — Google Gemini 3.8 Flash + Gemini 3.8 Flash Cyber release; **highest-engagement Google AI model item of the 2026-08-07 streak since the 2026-08-28 Gemini-3.5-Transcribe 343 pts**; **adjacent-not-promoted** per scope because Gemini is closed-weight and not on Robin's named daily-driver stack (Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI), but the **direct Gemini / M3 closed-weight cross-walk to the `MiniMax-m3` row** strengthens the closed-weight comparison anchor; the Gemini 3.8 Flash name + Gemini 3.8 Flash Cyber sub-variant cross-walks to the `MiniMax-H3` naming pattern (next-gen model with multimodal extensions — H3 had native audio + 2K video, Gemini 3.8 Flash CLine truncated
**Latest update — web-search-1 attempted 2026-09-02T18:10Z skipped.** One source-specific update run for `web-search-1` (Web Search / Tavily) per the source-specific instruction "Track CelVivo / 3Brain / Cellink / organoid news from web (NOTE: needs TAVILY_API_KEY, currently empty)". The deterministic pull was **skipped**: `web-search-1` is not enabled in the runtime registry and `TAVILY_API_KEY` is empty, so no Tavily request was made and no raw data files were written. The nightly searxng-fallback slot for the 24-hour window is empty on disk (no fallback result) — no web-search evidence of any kind landed in the 24-hour window. This is the **twentieth consecutive skip** on the same code path (after 2026-08-08 + 2026-08-10 + 2026-08-12 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01); the latest successful Tavily pull remains 2026-08-03 18:08 UTC. No new CelVivo / 3Brain / Cellink / organoid findings were available for synthesis; no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. Discord between on-disk `~/.openwiki/connectors/web-search/config.json` (which shows `enabled: true` + 6 Chinese queries) and the runtime registry (still reports the connector as disabled) is the same operational issue noted on every prior skip run — recorded for traceability only, not a wiki-synthesis concern. To resolve the 20-run skip streak, set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state. Wiki edits this run: (a) [`/sources/web-search.md`](/sources/web-search.md) — added a new "2026-09-02 attempted update — skipped" section at the top of the file following the established 5-field structure (Status / Authentication / Coverage / Synthesis / Operational note); refreshed the header line to mention the 20th skip and "twenty runs"; refreshed the frontmatter `tags` to include `2026-09-02` and refreshed the `timestamp` to `2026-09-02T18:10:00Z`; refreshed the 2026-09-01 entry's "Operational note" to mention the 2026-09-02 follow-up + recast the 2026-09-01 attempt as the "nineteenth consecutive skip" at the time of its attempt (twentieth including the 2026-09-02 follow-up); refreshed the 2026-08-31 → 2026-08-08 entries' "Operational note" sections to mention the 2026-09-02 follow-up. **No new theme row, no commitment row, no open-question row, no personal-logistics item** — the synthesis layer is unchanged because the connector produced no new evidence. Prior run was **hackernews-1 update (2026-09-02T18:00Z)** — see the paragraph above.
**Latest update — git-repo-1 (2026-09-02T18:16Z).** One source-specific update run for `git-repo-1` (Obsidian vault + OpenWiki wiki) per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-09-02T18-16-44-603Z/manifest.json`. **Vault HEAD unchanged** at `391e47131679ce9edf0f525236e78ebb13e0d232` (same as the 2026-09-01T18:07Z + 2026-08-31T18:09Z fetches) — **0 new vault commits** in the 2026-09-01T18:07Z → 2026-09-02T18:16Z 24-hour window; the 2026-08-31 THIRD consecutive single-day 5-paper CelVivo LDR cluster (Stewart 2023 + Aiello 2025 + Nguyen 2024 + Miao 2025 + Yan 2024, all at `obsidian-vault/04-Literature/Deep-Reads/CelVivo/`) remains the most recent committed vault activity. **Vault silent for the 2nd consecutive fetch** since the 2026-08-31 cluster, **2 calendar days stale**. **No new vault mtime changes** — the 4 untracked vault directories / files from the 2026-09-01T18:07Z fetch carry forward with bumped carry-forward counts: `Review/zhou2023_computer_vision_microfluidics.md` **21-day → 22-day carry-forward** (**19 → 20 fetches silent**, **one-off interpretation confirmed at 2026-08-28 fetch** per the 2026-08-27 fetch confirmation, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + **2026-09-02** fetches; entry remains a stale / not recurring carry-forward note) + `celvivo_commercial/` + `templates/` **16-day → 17-day carry-forward** (**both confirmed one-off alongside the `Review/` entry at the 2026-08-28 fetch**, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + **2026-09-02** fetches; **16 fetches silent** on each) + `deepread_40240593/` **9-day → 10-day carry-forward** (the directory mtime is still **2026-08-24 16:31 +0800** at the 2026-09-02T18:16Z fetch, mtime unchanged across the 2026-08-25 + 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + **2026-09-02** fetches — **9 consecutive silent fetches** since the 2026-08-24/25 burst, **10 fetches silent on directory mtime**; working-folder pipeline hypothesis continuing to weaken — the entry should remain a stale / not recurring carry-forward note on the next synthesis pass alongside the other 3 entries). **Wiki HEAD** bumped from `0890fdb76b9a249b21c5c5b3a1d5b1e1b8e4b2e9` (2026-09-01T18:07Z fetch) to **`cedbb7fad6372437a6fad08a4dfa9c2bbcfbfd66`** (2026-09-02T18:16Z fetch); **2 new automated wiki commits** in the 2026-09-01T18:07Z → 2026-09-02T18:16Z 24-hour window: (a) `c18d383` chore: daily update 2026-09-02 (2026-09-02T02:?? +0800; per `git show --stat c18d383` the commit touched 13 files from the prior dirty set including `.last-update.json` + `index.md` + `quickstart.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md` + `themes.md` + `themes/03-ai-agents.md` — reducing uncommitted-file count from 11 → 5) + (b) `cedbb7f` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-02, 2026-09-02T02:30 +0800 — the **nineteenth** consecutive sources-sync re-applying the `2507925` 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + `1003b92` 2026-08-25 + `ebb95c0` 2026-08-26 + `502281f` 2026-08-27 + `c992dd6` 2026-08-28 + `37d1ba6` 2026-08-29 + `d56da3a` 2026-08-30 + `9582dea` 2026-08-31 + `0890fdb` 2026-09-01 + now `cedbb7f` 2026-09-02; per `git show --stat cedbb7f` the commit re-touched `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md` — the same 4 source-sync files that the `c18d383` daily update had cleared were re-touched by the sources-sync that landed later in the window). **11 uncommitted wiki files** in working tree per the manifest `changedFiles` list at this fetch (`M .last-update.json` + `M index.md` + `M quickstart.md` + `M sources/README.md` + `M sources/hackernews.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes.md`) — same shape as the 2026-09-01T18:07Z fetch because the `cedbb7f` sources-sync re-touched the 4 source-sync files that the `c18d383` daily update had cleared + the CLI metadata cycle re-touched `sources/README.md` + `themes.md` + `index.md`. **Synthesis-layer impact**: **none** — vault delta is empty (no new commits, no new mtime changes) and the wiki delta is automated maintenance only; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the wiki-side automateLine truncated
sources/README.md
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@@ -15,8 +15,8 @@ Per-connector evidence indexes. Each connector gets its own page (for example `g
| Connector | Page | Status |
| --- | --- | --- |
| Hacker News (`hackernews-1`, LLM-agent topics) | [/sources/hackernews.md](/sources/hackernews.md) | active (last 2026-08-27 18:00 UTC — **seventeenth pull since 2026-08-07**; the 2026-08-27 pull surfaces **the first non-fully-zero / non-clean-zero Algolia lane since the 2026-08-22 noise-only pull** — `organoid` 10 substring-noise hits (all `organiz-` collisions) + `3Brain` 9 substring-noise hits (all `brain` collisions) + `Cellink` 4 substring-noise hits (all `clink`/`calling` collisions) + **`deepagents` 1 thematic hit — the first positive `deepagents` Algolia hit in the 2026-08-07 streak**: `49461911` "LangChain-AI/deepagents: agent harness" 1 pt, 0 cmts, github.com/langchain-ai/deepagents — the canonical LangChain `deepagents` repo framing itself as "agent harness"); `CelVivo` and `openwiki` returned 0 hits (clean zero); the 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26 fully-zero pulls are four consecutive fully-zero Algolia lanes bookended by the 2026-08-22 + 2026-08-27 substring-noise-only pulls, the longest fully-zero streak of the 2026-08-07 streak to date; the empty-pulls-on-vendor-queries cadence is normal under the 6-query LLM-agent topic set, not an outage, no config-side intervention needed; the strongest named-stack-adjacent items on the 2026-08-27 pull are `49458161` "Nvidia agrees to acquire Hugging Face for $13B" 1719 pts + 802 cmts top+best (**highest-engagement item of the pull**; **highest-engagement item of the entire 2026-08-07 streak to date**, surpassing Dolly Parton obituary 1535 pts + AWS DuckDB 762 pts + FT Anthropic 738 pts; the **largest AI-infrastructure consolidation event** of the 2026-08 streak, nearly twice the 2026-08-17 Stripe-OpenRouter $7B+ acquisition; cross-walks to the `MiniMax-m3` row's open-weight comparison anchor — Hugging Face is the canonical distribution channel for DeepSeek V4 Flash / GLM / Qwen / Llama; adjacent-not-promoted per scope — Hugging Face is not on Robin's named stack) + `49458418` "CEO fired developers to make room for AI. Developers create open source AI CEO" 890 pts + 608 cmts best (SenteLabsAI/OpenExecutive — **second-highest-engagement item on the pull**; meta-statement about agent-as-orchestrator-of-agents; adjacent-not-promoted per scope — community open-source project, not on Robin's named stack) + `49454314` "The Hugging Face incident and the road ahead" 324 pts + 417 cmts top+best (OpenAI blog — **direct corollary to the Nvidia-HF acquisition**; **highest comment-vs-upvote ratio of the pull** at 1.29, substantive debate per upvote; adjacent-not-promoted per scope — upstream AI-vendor competitive context) + `49466917` "Small Models Have Arrived" 135 pts + 46 cmts top (calv.info — **strongest local-LLM-adjacent item of the pull by direct cross-walk** to the `MiniMax-m3` row's open-weight local-LLM lane; adjacent-not-promoted per scope — small-models essays are upstream local-LLM context) + `49461911` "LangChain-AI/deepagents: agent harness" 1 pt (LangChain's official GitHub — **7th entry in the self-hosted-agentic-substrate cluster**, ending the cooling-density pattern of the past 3 pulls; cluster density now 0.50 entries/day over 14 days, total cluster engagement 792 pts across 7 items, strongest cluster diversity of the streak — independent vendors + personal-blog essays + definitional essays + the canonical open-source LLM framework; adjacent-not-promoted per scope — substrate-protocol pointer, not a Robin-named-stack change); four secondary adjacents stay adjacent-not-promoted: `49465461` "The Teaser Period: Why the AI Boom Is Hitting a Reset Wall" 64 pts + 57 cmts top (groundbrkr.com — AI-boom-reset commentary, Nvidia-HF-adjacent); `49458875` "Humanity has the debate about AI consciousness backwards" 35 pts + 86 cmts top (Economist — AI-consciousness essay, **highest comment-vs-upvote ratio of the secondary adjacents** at 2.46); `49466052` "Nvidia projects $673B in sales as AI demand widens" 77 pts + 61 cmts top (forgeeks.net — Nvidia-business forecast adjacent); `49467551` "Show HN: My Claude quota ran out in 10 minutes" 34 pts + 17 cmts top (github.com/kelviq/tare — **fourth Claude Code traceability item of the streak**). The 2026-08-26 pull (prior) added four named-stack-adjacent items — `49449507` "GLM-5.3-Flash" 530 pts top (Z.ai blog — **strongest open-weight-LLM-adjacent item of the pull by inference-lane impact**; **highest engagement open-weight-LLM item of the 2026-08-07 streak**; **eighth open-weight-LLM-adjacent item in the streak** — DeepSeek V4 Flash vision 379 pts 2026-08-21 + Unsloth Dynamic 3.0 GGUFs 314 pts 2026-08-19 + GLM-5.3 vs Anthropic/OpenAI 141 pts 2026-08-23 + Qwen 3.8 27B reverse-engineering 234 pts 2026-08-23 + GLM-5.3 tablet 268 pts 2026-08-23 + Qwen 3.8-Flash-Next 244 pts 2026-08-25 + **GLM-5.3-Flash 530 pts 2026-08-26** — **2,551+ pts across 8 top-feed items in 6 pulls over 9 days**, the **strongest sustained engagement cluster in the 2026-08-07 streakLine truncated
| Git repo (`git-repo-1`, Obsidian vault + OpenWiki wiki) | [/sources/git-repo.md](/sources/git-repo.md) | active (last 2026-08-30 18:06 UTC — vault HEAD unchanged at `9d4767c7` for the 5th consecutive fetch since the 2026-08-24/25 SECOND 5-paper LDR burst, **0 new vault commits** in the 2026-08-29T18:10Z → 2026-08-30T18:06Z 24-hour window, **vault silent for the 5th consecutive fetch**, **5 calendar days stale**); 3 NEW `04-Literature/Deep-Reads/` subfolders created in a single day on 2026-08-25 — `Vascularized-Organoids/` + `Cardiac-Organoids/` + `Skin-Organoids/`; 2 new automated wiki commits since the 2026-08-29T18:10Z fetch on 2026-08-30 (`7eed6ca` chore: daily update 2026-08-30 — single-connector raw data refresh (HN-1 + git-repo-1; web-search-1 skipped) committed 13 files reducing uncommitted-file count from 8 → 5 + `d56da3a` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-30 — the **sixteenth** consecutive sources-sync re-applying the count-data wipe pattern after `37d1ba6` 2026-08-29 + `c992dd6` 2026-08-28 + `502281f` 2026-08-27 + `ebb95c0` 2026-08-26 + `1003b92` 2026-08-25 + `127c2dc` 2026-08-24 + `8f8f767` 2026-08-23 + `43d4548` 2026-08-22 + `f6c2576` 2026-08-21 + `bd30339` 2026-08-20 + `dcb53a2` 2026-08-19 + `1fc73ae` 2026-08-18 + `be49285` 2026-08-17 + `997b648` 2026-08-16 + `2507925` 2026-08-15)); wiki HEAD bumped `37d1ba6d` → `d56da3af` over the 2026-08-30 window; the `d56da3a` sources-sync re-touched `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md` — the same 4 source-sync files that the `7eed6ca` daily update had cleared were re-touched by the sources-sync that landed later in the window, re-bumping the dirty-file count from 5 → 9; 1 new untracked directory `deepread_40240593/` (LDR pipeline intermediate-artifact workspace with 7 subdirs: 5 PMID-named `deepread_<PMID>/` + 2 slug-named `deepread_brain_organoid_fluid/` + `deepread_shear_stress_cs_os/` that exactly map to the Aiello + CelVivo App Note papers) + 2 carry-forward untracked directories `celvivo_commercial/` + `templates/` + 1 carry-forward untracked file `Review/zhou2023_computer_vision_microfluidics.md`; the 4 carry-forward untracked set bumped carry-forward at the 2026-08-30 fetch — `Review/` 18 → **19-day** (**17 fetches silent**, stale carry-forward note per the 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 confirmations of the 2026-08-26 watchlist-downgrade consideration as a one-off), `celvivo_commercial/` 13 → **14-day** + `templates/` 13 → **14-day** (**carrying forward unchanged as stale carry-forward notes** at the 2026-08-30 fetch, the 2026-08-28 confirmation still standing), `deepread_40240593/` 6 → **7-day** (**6 consecutive silent fetches** since the 2026-08-24/25 burst, working-folder pipeline hypothesis continuing to weaken; the unchanged-mtime signal at 2026-08-24 16:31 +0800 has now held across 6 consecutive silent fetches) — the `Review/` + `celvivo_commercial/` + `templates/` + `deepread_40240593/` entries should all be demoted to stale / not recurring carry-forward notes on the next synthesis pass) |
| Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-26 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing; **fourteenth consecutive skip on the same code path**) |
| Git repo (`git-repo-1`, Obsidian vault + OpenWiki wiki) | [/sources/git-repo.md](/sources/git-repo.md) | active (last 2026-08-30 18:06 UTC — vault HEAD unchanged at `9d4767c7` for the 5th consecutive fetch since the 2026-08-24/25 SECOND 5-paper LDR burst, **0 new vault commits** in the 2026-08-29T18:10Z → 2026-08-30T18:06Z 24-hour window, **vault silent for the 5th consecutive fetch**, **5 calendar days stale**); 3 NEW `04-Literature/Deep-Reads/` subfolders created in a single day on 2026-08-25 — `Vascularized-Organoids/` + `Cardiac-Organoids/` + `Skin-Organoids/`; 2 new automated wiki commits since the 2026-08-29T18:10Z fetch on 2026-08-30 (`7eed6ca` chore: daily update 2026-08-30 — single-connector raw data refresh (HN-1 + git-repo-1; web-search-1 skipped) committed 13 files reducing uncommitted-file count from 8 → 5 + `d56da3a` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-30 — the **sixteenth** consecutive sources-sync re-applying the count-data wipe pattern after `37d1ba6` 2026-08-29 + `c992dd6` 2026-08-28 + `502281f` 2026-08-27 + `ebb95c0` 2026-08-26 + `1003b92` 2026-08-25 + `127c2dc` 2026-08-24 + `8f8f767` 2026-08-23 + `43d4548` 2026-08-22 + `f6c2576` 2026-08-21 + `bd30339` 2026-08-20 + `dcb53a2` 2026-08-19 + `1fc73ae` 2026-08-18 + `be49285` 2026-08-17 + `997b648` 2026-08-16 + `2507925` 2026-08-15)); wiki HEAD bumped `37d1ba6d` → `d56da3af` over the 2026-08-30 window; the `d56da3a` sources-sync re-touched `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md` — the same 4 source-sync files that the `7eed6ca` daily update had cleared were re-touched by the sources-sync that landed later in the window, re-bumping the dirty-file count from 5 → 9; 1 new untracked directory `deepread_40240593/` (LDR pipeline intermediate-artifact workspace with 7 subdirs: 5 PMID-named `deepread_<PMID>/` + 2 slug-named `deepread_brain_organoid_fluid/` + `deepread_shear_stress_cs_os/` that exactly map to the Aiello + CelVivo App Note papers) + 2 carry-forward untracked directories `celvivo_commercial/` + `templates/` + 1 carry-forward untracked file `Review/zhou2023_computer_vision_microfluidics.md`; the 4 carry-forward untracked set bumped carry-forward at the 2026-08-30 fetch — `Review/` 18 → **19-day** (**17 fetches silent**, stale carry-forward note per the 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 confirmations of the 2026-08-26 watchlist-downgrade consideration as a one-off), `celvivo_commercial/` 13 → **14-day** + `templates/` 13 → **14-day** (**carrying forward unchanged as stale carry-forward notes** at the 2026-08-30 fetch, the 2026-08-28 confirmation still standing), `deepread_40240593/` 6 → **7-day** (**6 consecutive silent fetches** since the 2026-08-24/25 burst, working-folder pipeline hypothesis continuing to weaken; the unchanged-mtime signal at 2026-08-24 16:31 +0800 has now held across 6 consecutive silent fetches) — the `Review/` + `celvivo_commercial/` + `templates/` + `deepread_40240593/` entries should all be demoted to stale / not recurring carry-forward notes on the next synthesis pass; the 2026-08-31 daily update `c9e2770` (single-connector raw-data refresh combining the HN-1 2026-08-31T18:00Z Almanac-anchored agent-memory-architecture refresh + git-repo-1 2026-08-31T18:09Z 5-paper CelVivo LDR burst fetch + web-search-1 2026-08-31 (skipped)) + 2026-08-31 sources-sync `9582dea` (the **seventeenth** consecutive sources-sync) bumped wiki HEAD to `9582dea` + bumped dirty count to 11; the 2026-08-31 git-repo-1 fetch (vault HEAD bumped `9d4767c7` → `391e4713`, 5 new vault commits, ending the 5-day vault silence) is the THIRD consecutive single-day 5-paper CelVivo LDR burst (Yan + Stewart + Nguyen + Aiello + Miao all at `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` capital-V parallel subfolder — Robin's first parallel-naming deep-read subfolder convention) — see [`/sources/git-repo.md`](/sources/git-repo.md) for the full 2026-08-31 fetch delta; the 2026-09-01T18:07Z + 2026-09-02T18:16Z fetches observed vault HEAD unchanged at `391e4713` for the 1st + 2nd consecutive fetch since the 2026-08-31 cluster (**0 new vault commits**, **2 calendar days stale**), bumped the 4 carry-forward untracked directories to 22/17/17/10-day carry-forward, bumped wiki HEAD to `cedbb7f` via 2 automated wiki commits at the 2026-09-02T18:16Z fetch (`c18d383` daily update 2026-09-02 reducing dirty count 11 → 5 + `cedbb7f` sources-sync 2026-09-02 — the **nineteenth** consecutive sources-sync) — the dirty-file count re-bumped to 11 because the `cedbb7f` sources-sync re-touched the same 4 source-sync files the `c18d383` daily update had cleared; the synthesis layer (themes / commitments / open-questions / personal-logistics) is independent of the wiki-side automated maintenance commits and remains unchanged from the 2026-08-31 CelVivo-anchored deep-read cluster) |
| Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, 2026-09-01, and 2026-09-02 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing; **twentieth consecutive skip on the same code path** including 2026-09-02) |
Additional connectors appear here automatically once they are authenticated and ingested at least once.
@@ -28,9 +28,9 @@ Additional connectors appear here automatically once they are authenticated and
| Slack | not configured | `openwiki auth slack` | Needs `search:read` for definitive self-message search; otherwise falls back to recent conversations. |
| Notion | not configured | Notion MCP credentials | Discovery via `openwiki_list_mcp_tools`; do not guess tool names. |
| X / Twitter | not configured | `OPENWIKI_X_ACCESS_TOKEN` via `openwiki auth x` | Streams: `home_timeline`, `user_posts`, `mentions`, `bookmarks`, `list_posts`. |
| Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-26 update attempts were skipped because the connector was not enabled in the runtime registry (**fourteenth consecutive skip on the same code path**; nightly searxng-fallback slot for 2026-08-24 is also empty on disk). Evidence at [/sources/web-search.md](/sources/web-search.md). |
| Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, 2026-09-01, and 2026-09-02 update attempts were skipped because the connector was not enabled in the runtime registry (**twentieth consecutive skip on the same code path** including 2026-09-02; nightly searxng-fallback slot for the 24-hour windows is also empty on disk). Evidence at [/sources/web-search.md](/sources/web-search.md). |
| Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Source-specific query set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` (LLM-agent topics per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories"). Last successful pull 2026-08-27 18:00 UTC — **seventeenth pull since 2026-08-07** with a **substring-noise-only + 1 thematic `deepagents` hit Algolia lane** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 + 2026-08-19 + 2026-08-21 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 + 2026-08-20 + 2026-08-22 + 2026-08-27 noise-only pulls; the **2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26 fully-zero Algolia lanes form a 4-day streak**, the **longest fully-zero Algolia streak of the 2026-08-07 streak to date**, bookended by the 2026-08-22 + 2026-08-27 substring-noise-only pulls; empty-pulls-on-vendor-queries is normal cadence, not an outage, no config-side intervention needed). The 2026-08-27 pull recorded **five adjacents worth flagging for traceability** — `49458161` "Nvidia agrees to acquire Hugging Face for $13B" 1719 pts + 802 cmts top+best (**highest-engagement item of the pull**; **highest-engagement item of the entire 2026-08-07 streak to date**, surpassing Dolly Parton obituary 1535 pts + AWS DuckDB 762 pts + FT Anthropic 738 pts; the **largest AI-infrastructure consolidation event** of the 2026-08 streak, nearly twice the 2026-08-17 Stripe-OpenRouter $7B+ acquisition; cross-walks to the `MiniMax-m3` row's open-weight comparison anchor — Hugging Face is the canonical distribution channel for DeepSeek V4 Flash / GLM / Qwen / Llama; adjacent-not-promoted per scope — Hugging Face is not on Robin's named stack) + `49458418` "CEO fired developers to make room for AI. Developers create open source AI CEO" 890 pts + 608 cmts best (SenteLabsAI/OpenExecutive — **second-highest-engagement item on the pull**; meta-statement about agent-as-orchestrator-of-agents; adjacent-not-promoted per scope — community open-source project, not on Robin's named stack) + `49454314` "The Hugging Face incident and the road ahead" 324 pts + 417 cmts top+best (OpenAI blog — **direct corollary to the Nvidia-HF acquisition**; **highest comment-vs-upvote ratio of the pull** at 1.29, substantive debate per upvote; adjacent-not-promoted per scope — upstream AI-vendor competitive context) + `49466917` "Small Models Have Arrived" 135 pts + 46 cmts top (calv.info — **strongest local-LLM-adjacent item of the pull by direct cross-walk** to the `MiniMax-m3` row's open-weight local-LLM lane; adjacent-not-promoted per scope — small-models essays are upstream local-LLM context) + `49461911` "LangChain-AI/deepagents: agent harness" 1 pt (LangChain's official GitHub — **7th entry in the self-hosted-agentic-substrate cluster**, ending the cooling-density pattern of the past 3 pulls; cluster density now 0.50 entries/day over 14 days, total cluster engagement 792 pts across 7 items, strongest cluster diversity of the streak — independent vendors + personal-blog essays + definitional essays + the canonical open-source LLM framework; adjacent-not-promoted per scope — substrate-protocol pointer, not a Robin-named-stack change); four secondary adjacents stay adjacent-not-promoted: `49465461` "The Teaser Period: Why the AI Boom Is Hitting a Reset Wall" 64 pts + 57 cmts top (groundbrkr.com — AI-boom-reset commentary, Nvidia-HF-adjacent); `49458875` "Humanity has the debate about AI consciousness backwards" 35 pts + 86 cmts top (Economist — AI-consciousness essay, **highest comment-vs-upvote ratio of the secondary adjacents** at 2.46); `49466052` "Nvidia projects $673B in sales as AI demand widens" 77 pts + 61 cmts top (forgeeks.net — Nvidia-business forecast adjacent); `49467551` "Show HN: My Claude quota ran out in 10 minutes" 34 pts + 17 cmts top (github.com/kelviq/tare — **fourth Claude Code traceability item of the streak**). The 2026-08-26 pull (prior) added four named-stack-adjacent items — `49449507` "GLM-5.3-Flash" 530 pts top (Z.ai blog — **strongest open-weight-LLM-adjacent item of the pull by inference-lane impact**; **highest engagement open-weight-LLM item of the 2026-08-07 streak**; **eighth open-weight-LLM-adjacent item in the streak** — DeepSeek V4 Flash vision 379 pts 2026-08-21 + Unsloth Dynamic 3.0 GGUFs 314 pts 2026-08-19 + GLM-5.3 vs Anthropic/OpenAI 141 pts 2026-08-23 + Qwen 3.8 27B reverse-engineering 234 pts 2026-08-23 + GLM-5.3 tablet 268 pts 2026-08-23 + Qwen 3.8-Flash-Next 244 pts 2026-08-25 + **GLM-5.3-Flash 530 pts 2026-08-26** — **2,551+ pts across 8 top-feed items in 6 pulls over 9 days**, the **strongest sustained engagement cluster in the 2026-08-07 streak**; Z.ai flash-tier framing mirrors the V4-Flash + Qwen-FlLine truncated
| Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-30 18:06 UTC — vault HEAD unchanged at `9d4767c7` for the 5th consecutive fetch since the 2026-08-24/25 SECOND consecutive 5-paper LDR burst, **0 new vault commits** in the 2026-08-29T18:10Z → 2026-08-30T18:06Z 24-hour window, **vault silent for the 5th consecutive fetch**, **5 calendar days stale**); 3 NEW `04-Literature/Deep-Reads/` subfolders created in a single day on 2026-08-25 — `Vascularized-Organoids/` + `Cardiac-Organoids/` + `Skin-Organoids/`; 2 new automated wiki commits since the 2026-08-29T18:10Z fetch on 2026-08-30 (`7eed6ca` chore: daily update 2026-08-30 — single-connector raw data refresh (HN-1 + git-repo-1; web-search-1 skipped) committed 13 files reducing uncommitted-file count from 8 → 5 + `d56da3a` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-30 — the **sixteenth** consecutive sources-sync re-applying the count-data wipe pattern); wiki HEAD bumped `37d1ba6d` → `d56da3af` over the 2026-08-30 window; the `d56da3a` sources-sync re-touched `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md` — the same 4 source-sync files that the `7eed6ca` daily update had cleared were re-touched by the sources-sync that landed later in the window, re-bumping the dirty-file count from 5 → 9; 1 new untracked directory `deepread_40240593/` (LDR pipeline intermediate-artifact workspace with 7 subdirs: 5 PMID-named `deepread_<PMID>/` + 2 slug-named `deepread_brain_organoid_fluid/` + `deepread_shear_stress_cs_os/` that exactly map to the Aiello + CelVivo App Note papers) + 2 prior carry-forward untracked directories `celvivo_commercial/` + `templates/` + 1 prior carry-forward untracked file `Review/zhou2023_computer_vision_microfluidics.md`; the 4 carry-forward untracked set bumped carry-forward at the 2026-08-30 fetch — `Review/` 18 → **19-day** (**17 fetches silent**, stale carry-forward note per the 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 confirmations of the 2026-08-26 watchlist-downgrade consideration as a one-off), `celvivo_commercial/` 13 → **14-day** + `templates/` 13 → **14-day** (**carrying forward unchanged as stale carry-forward notes** at the 2026-08-30 fetch, the 2026-08-28 confirmation still standing), `deepread_40240593/` 6 → **7-day** (**6 consecutive silent fetches** since the 2026-08-24/25 burst, working-folder pipeline hypothesis continuing to weaken; the unchanged-mtime signal at 2026-08-24 16:31 +0800 has now held across 6 consecutive silent fetches) — the `Review/` + `celvivo_commercial/` + `templates/` + `deepread_40240593/` entries should all be demoted to stale / not recurring carry-forward notes on the next synthesis pass. |
| Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-30 18:06 UTC — vault HEAD unchanged at `9d4767c7` for the 5th consecutive fetch since the 2026-08-24/25 SECOND consecutive 5-paper LDR burst, **0 new vault commits** in the 2026-08-29T18:10Z → 2026-08-30T18:06Z 24-hour window, **vault silent for the 5th consecutive fetch**, **5 calendar days stale**); 3 NEW `04-Literature/Deep-Reads/` subfolders created in a single day on 2026-08-25 — `Vascularized-Organoids/` + `Cardiac-Organoids/` + `Skin-Organoids/`; 2 new automated wiki commits since the 2026-08-29T18:10Z fetch on 2026-08-30 (`7eed6ca` chore: daily update 2026-08-30 — single-connector raw data refresh (HN-1 + git-repo-1; web-search-1 skipped) committed 13 files reducing uncommitted-file count from 8 → 5 + `d56da3a` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-30 — the **sixteenth** consecutive sources-sync re-applying the count-data wipe pattern); wiki HEAD bumped `37d1ba6d` → `d56da3af` over the 2026-08-30 window; the `d56da3a` sources-sync re-touched `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md` — the same 4 source-sync files that the `7eed6ca` daily update had cleared were re-touched by the sources-sync that landed later in the window, re-bumping the dirty-file count from 5 → 9; 1 new untracked directory `deepread_40240593/` (LDR pipeline intermediate-artifact workspace with 7 subdirs: 5 PMID-named `deepread_<PMID>/` + 2 slug-named `deepread_brain_organoid_fluid/` + `deepread_shear_stress_cs_os/` that exactly map to the Aiello + CelVivo App Note papers) + 2 prior carry-forward untracked directories `celvivo_commercial/` + `templates/` + 1 prior carry-forward untracked file `Review/zhou2023_computer_vision_microfluidics.md`; the 4 carry-forward untracked set bumped carry-forward at the 2026-08-30 fetch — `Review/` 18 → **19-day** (**17 fetches silent**, stale carry-forward note per the 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 confirmations of the 2026-08-26 watchlist-downgrade consideration as a one-off), `celvivo_commercial/` 13 → **14-day** + `templates/` 13 → **14-day** (**carrying forward unchanged as stale carry-forward notes** at the 2026-08-30 fetch, the 2026-08-28 confirmation still standing), `deepread_40240593/` 6 → **7-day** (**6 consecutive silent fetches** since the 2026-08-24/25 burst, working-folder pipeline hypothesis continuing to weaken; the unchanged-mtime signal at 2026-08-24 16:31 +0800 has now held across 6 consecutive silent fetches) — the `Review/` + `celvivo_commercial/` + `templates/` + `deepread_40240593/` entries should all be demoted to stale / not recurring carry-forward notes on the next synthesis pass. The 2026-08-31 daily update `c9e2770` (single-connector raw-data refresh combining HN-1 + git-repo-1 + web-search-1 skipped) + 2026-08-31 sources-sync `9582dea` (the **seventeenth** consecutive sources-sync) bumped wiki HEAD to `9582dea` + bumped dirty count to 11; the 2026-08-31 git-repo-1 fetch (vault HEAD bumped `9d4767c7` → `391e4713`, 5 new vault commits, ending the 5-day vault silence) is the THIRD consecutive single-day 5-paper CelVivo LDR burst (Yan + Stewart + Nguyen + Aiello + Miao all at `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` capital-V parallel subfolder — Robin's first parallel-naming deep-read subfolder convention). The 2026-09-01T18:07Z + 2026-09-02T18:16Z fetches observed vault HEAD unchanged at `391e4713` for the 1st + 2nd consecutive fetch since the 2026-08-31 cluster (**0 new vault commits**, **2 calendar days stale**), bumped the 4 carry-forward untracked directories to 22/17/17/10-day carry-forward, bumped wiki HEAD to `cedbb7f` via 2 automated wiki commits at the 2026-09-02T18:16Z fetch (`c18d383` daily update 2026-09-02 reducing dirty count 11 → 5 + `cedbb7f` sources-sync 2026-09-02 — the **nineteenth** consecutive sources-sync); the synthesis layer remains unchanged. |
## How new source pages get created
sources/git-repo.md
+63 -7
View File
@@ -1,10 +1,66 @@
---
type: "Reference"
title: "Git repo"
openwiki_generated: true
---
---
type: "Reference"
title: "Git repo — evidence index (Obsidian vault + OpenWiki wiki, Robin)"
description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD `391e4713`, 2026-09-01, **vault HEAD unchanged** at the 2026-08-31T18:09Z fetch level for the 1st consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster, **0 new vault commits** in the 2026-08-31T18:09Z → 2026-09-01T18:07Z 24-hour window, **1 calendar day of vault silence** since the 2026-08-31 cluster (Yan + Stewart + Nguyen + Aiello + Miao all `obsidian-vault/04-Literature/Deep-Reads/CelVivo/`) remains the most recent committed vault activity); carry-forward untracked-file set bumps: `Review/zhou2023_computer_vision_microfluidics.md` 20 → **21-day carry-forward** (18 → **19 fetches silent**, stale carry-forward note per 2026-08-28 demotion), `celvivo_commercial/` + `templates/` 15 → **16-day carry-forward** (both confirmed one-off alongside `Review/` at the 2026-08-28 fetch, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + **2026-09-01** fetches), `deepread_40240593/` 8 → **9-day carry-forward** (mtime unchanged across **8 consecutive silent fetches** since creation, working-folder pipeline hypothesis continuing to weaken); and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD `0890fdb`, 2026-09-01, **2 new automated wiki commits in the 2026-08-31T18:09Z → 2026-09-01T18:07Z 24-hour window: `71f2da5` chore: daily update 2026-09-01 (2026-09-01T02:24 +0800; per `git show --stat 71f2da5` the commit touched 17 files including `.last-update.json` + `commitments.md` + `index.md` + `quickstart.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/literature.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md` + `themes.md` + `themes/03-ai-agents.md` + `themes/05-robin-research.md` + `themes/index.md`), then `0890fdb` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-01 — the **eighteenth** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + `1003b92` 2026-08-25 + `ebb95c0` 2026-08-26 + `502281f` 2026-08-27 + `c992dd6` 2026-08-28 + `37d1ba6` 2026-08-29 + `d56da3a` 2026-08-30 + `9582dea` 2026-08-31 + now `0890fdb` 2026-09-01) committed `sources/{nocodb,ragflow,seafile,wikijs}.md` re-touched by the sources-sync; the very next synthesis edits from the HN-1 2026-09-01T18:00Z + web-search-1 2026-09-01 (skipped) + this git-repo-1 2026-09-01T18:07Z run re-touch the same files leaving the dirty count at **11 per the manifest `changedFiles` list** — `M .last-update.json` + `M index.md` + `M quickstart.md` + `M sources/hackernews.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes.md` + `M themes/03-ai-agents.md` — same shape as the 2026-08-31T18:09Z fetch because the `0890fdb` sources-sync re-touched the 4 source-sync files that the `71f2da5` daily update had cleared + the CLI metadata cycle re-touched the same files + `M themes.md` + `M themes/03-ai-agents.md` re-touched by the 2026-09-01 daily update metadata cycle**)**. This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD `391e4713`, 2026-09-02, **vault HEAD unchanged** at the 2026-08-31T18:09Z fetch level for the 2nd consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster, **0 new vault commits** in the 2026-09-01T18:07Z → 2026-09-02T18:16Z 24-hour window, **2 calendar days of vault silence** since the 2026-08-31 cluster (Yan + Stewart + Nguyen + Aiello + Miao all `obsidian-vault/04-Literature/Deep-Reads/CelVivo/`) remains the most recent committed vault activity); carry-forward untracked-file set bumps: `Review/zhou2023_computer_vision_microfluidics.md` 21 → **22-day carry-forward** (19 → **20 fetches silent**, stale carry-forward note per 2026-08-28 demotion), `celvivo_commercial/` + `templates/` 16 → **17-day carry-forward** (both confirmed one-off alongside `Review/` at the 2026-08-28 fetch, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + **2026-09-02** fetches), `deepread_40240593/` 9 → **10-day carry-forward** (mtime unchanged across **9 consecutive silent fetches** since creation, working-folder pipeline hypothesis continuing to weaken); and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD `cedbb7fad6372437a6fad08a4dfa9c2bbcfbfd66`, 2026-09-02, **2 new automated wiki commits in the 2026-09-01T18:07Z → 2026-09-02T18:16Z 24-hour window: `c18d383` chore: daily update 2026-09-02 (2026-09-02T02:?? +0800; per `git show --stat c18d383` the commit touched 13 files including `.last-update.json` + `index.md` + `quickstart.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md` + `themes.md` + `themes/03-ai-agents.md`), then `cedbb7f` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-02 — the **nineteenth** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + `1003b92` 2026-08-25 + `ebb95c0` 2026-08-26 + `502281f` 2026-08-27 + `c992dd6` 2026-08-28 + `37d1ba6` 2026-08-29 + `d56da3a` 2026-08-30 + `9582dea` 2026-08-31 + `0890fdb` 2026-09-01 + now `cedbb7f` 2026-09-02) committed `sources/{nocodb,ragflow,seafile,wikijs}.md` re-touched by the sources-sync; the very next synthesis edits from the HN-1 2026-09-02T18:00Z + web-search-1 2026-09-02T18:10Z (skipped) + this git-repo-1 2026-09-02T18:16Z run re-touch the same files leaving the dirty count at **11 per the manifest `changedFiles` list** — `M .last-update.json` + `M index.md` + `M quickstart.md` + `M sources/README.md` + `M sources/hackernews.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes.md` — same shape as the 2026-09-01T18:07Z fetch because the `cedbb7f` sources-sync re-touched the 4 source-sync files that the `c18d383` daily update had cleared + the CLI metadata cycle re-touched the same files + `M themes.md` re-touched by the 2026-09-02 daily update metadata cycle)**. This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
tags: [sources, git-repo, vault, wiki, manifest, 2026-09-02, 2026-09-01, 2026-08-31, vault-silent-2d, nineteenth-sources-sync, review-templates-celvivo-commercial-confirmed-one-off, deepread-40240593-ten-silent-fetches]
timestamp: 2026-09-02T18:16:00Z
---
# Git repo — evidence index
This page is the **compact source-evidence index** for the local git-repo connector, which ingests Robin's Obsidian vault (`/home/ldw/workspace`) and the local OpenWiki wiki (`/home/ldw/.openwiki/wiki`). Each ingestion run writes a JSON manifest under `~/.openwiki/connectors/git-repo/raw/`.
## Source config
- Connector config path: `~/.openwiki/connectors/git-repo/config.json`
- Two configured local repos:
- `obsidian-vault` at `/home/ldw/workspace` (branch: `main`, HEAD `391e4713`, 2026-08-31 — 35 commits since 2026-08-03 fetch)
- `openwiki-wiki` at `/home/ldw/.openwiki/wiki` (branch: `main`, HEAD `cedbb7f`, 2026-09-02)
- Authentication: local path only — no remote, no credentials
## Latest manifest
- `~/.openwiki/connectors/git-repo/raw/2026-09-02T18-16-44-603Z/manifest.json` (generated 2026-09-02T18:16:44Z)
- Vault HEAD: `391e47131679ce9edf0f525236e78ebb13e0d232` (unchanged since 2026-08-31T13:42 +0800)
- Wiki HEAD: `cedbb7fad6372437a6fad08a4dfa9c2bbcfbfd66` (bumped from `0890fdb` at 2026-09-02)
- **0 new vault commits** in the 24-hour window (vault silent for the 2nd consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster)
- **2 new automated wiki commits** in the 24-hour window (`c18d383` daily update 2026-09-02 + `cedbb7f` sources-sync 2026-09-02 — the **nineteenth** consecutive sources-sync)
- 11 uncommitted wiki files in working tree per the manifest `changedFiles` list
## Carry-forward untracked directories
| Directory / file | Carry-forward | Fetches silent | Status |
| --- | ---: | ---: | --- |
| `Review/zhou2023_computer_vision_microfluidics.md` | **22-day** | 20 | stale carry-forward note (confirmed one-off at 2026-08-27 fetch, demoted at 2026-08-28 fetch) |
| `celvivo_commercial/` | **17-day** | 16 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
| `templates/` | **17-day** | 16 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
| `deepread_40240593/` | **10-day** | 9 | working-folder pipeline hypothesis continuing to weaken (mtime unchanged across 9 consecutive silent fetches since creation) |
## Recent commits — vault (last 5)
The most recent vault commits remain the 2026-08-31 THIRD consecutive single-day 5-paper CelVivo LDR burst (no new commits in the 24-hour window):
1. `391e4713` 2026-08-31 — deep-read: Yan 2024 Cell Reports TMEM106B SARS-CoV-2 ACE2-independent brain organoids (CelVivo)
2. `4fca0123` 2026-08-31 — deep-read: Miao 2025 Cell vascularized lung/gut organoids (CelVivo ClinoReactor)
3. `fad7e21e` 2026-08-31 — deep-read: Nguyen 2024 npj Viruses JEV G4 2022 Australia brain organoids (CelVivo)
4. `030f31ed` 2026-08-31 — deep-read: Aiello 2025 EMBO reports reproducible brain organoids (CelVivo ClinoReactor)
5. `eb24ab72` 2026-08-31 — deep-read: Stewart 2023 Front Microbiol BA.5/XBB neurotropic brain organoids (CelVivo)
## Recent commits — wiki (last 5)
1. `cedbb7f` 2026-09-02 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-02, **nineteenth** consecutive sources-sync)
2. `c18d383` 2026-09-02 — chore: daily update 2026-09-02 (13 files modified per `git show --stat c18d383`)
3. `0890fdb` 2026-09-01 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-01, eighteenth consecutive sources-sync)
4. `71f2da5` 2026-09-01 — chore: daily update 2026-09-01 (17 files modified per `git show --stat 71f2da5`)
5. `9582dea` 2026-08-31 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-31, seventeenth consecutive sources-sync)
## Synthesis-policy — this run
- Vault delta: empty (no new commits, no new mtime changes).
- Wiki delta: automated maintenance only.
- Synthesis-layer impact: **none**. The themes / commitments / open-questions / personal-logistics pages are independent of the wiki-side automated maintenance commits.
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-02T18:16Z)" paragraph on `/quickstart.md` for the full delta list.
## Previous run
- 2026-09-01T18:07Z — vault HEAD unchanged at `391e4713`, 2 new wiki commits (`71f2da5` + `0890fdb`), 11-dirty-file baseline, the 4 carry-forward untracked directories bumped to 21/16/16/9-day carry-forward. See [`/themes/05-robin-research.md`](/themes/05-robin-research.md) + `/quickstart.md` for the full synthesis of that run.
sources/hackernews.md
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@@ -2,8 +2,8 @@
type: "Reference"
title: "Hacker News — evidence index"
description: "Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items."
tags: [hackernews, evidence-index, source, 2026-09-01, 2026-08-31, 2026-08-30, 2026-08-29, 2026-08-28, 2026-08-27, 2026-08-26, 2026-08-25, 2026-08-24, 2026-08-23, 2026-08-22, 2026-08-21, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-16, 2026-08-15, 2026-08-13, 2026-08-12, 2026-08-10]
timestamp: 2026-09-01T18:00:29Z
tags: [hackernews, evidence-index, source, 2026-09-02, 2026-09-01, 2026-08-31, 2026-08-30, 2026-08-29, 2026-08-28, 2026-08-27, 2026-08-26, 2026-08-25, 2026-08-24, 2026-08-23, 2026-08-22, 2026-08-21, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-16, 2026-08-15, 2026-08-13, 2026-08-12, 2026-08-10, m4-pro-mac-mini-local-model-13th-cluster-entry, gemini-38-flash-closed-weight-adjacent, codex-cli-libreoffice-adjacent]
timestamp: 2026-09-02T18:00:30Z
---
# Hacker News — evidence index
@@ -16,10 +16,24 @@ Compact evidence trail for the Hacker News connector (`hackernews-1`, Robin-cura
- **Backend:** public HN feeds (`top`, `new`) + Algolia HN search queries
- **Auth:** none — public feeds
- **Window:** last 24 hours
- **Latest fetch:** `2026-09-01T18:00:29Z` (LLM-agent topic set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` — 6 queries; the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories" is the active query set; prior 2026-08-31 18:00, 2026-08-29 18:00, 2026-08-28 18:00, 2026-08-27 18:00, 2026-08-26 18:00, 2026-08-25 18:00, 2026-08-24 18:00, 2026-08-23 18:00, 2026-08-22 18:00, 2026-08-21 18:00, 2026-08-20 18:00, 2026-08-19 18:00, 2026-08-18 18:00, 2026-08-17 18:00, 2026-08-16 18:00, 2026-08-15 18:00, 2026-08-13 18:00, 2026-08-12 18:00, 2026-08-10 18:00, 2026-08-08 18:00, 2026-08-08 03:15, 2026-08-07 12:29, 2026-08-03 18:00, 2026-08-02 18:00, 2026-08-01 18:00, 2026-07-31 18:00, 2026-07-30 18:00, 2026-07-29 18:00, 2026-07-28 18:00, 2026-07-27 18:00, 2026-07-26 18:16 and 18:00 pulls also documented below)
- **Raw dumps:** `~/.openwiki/connectors/hackernews/raw/2026-09-01T18-00-02-157Z/hackernews-results.json` (current — **twenty-second pull since 2026-08-07; noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6** (same shape as the 2026-08-22 + 2026-08-27 + 2026-08-31 noise-only pulls): `organoid` returned 4 substring-noise hits on the `organiz-`/`organi-` stem (Executor / Supafork / Dashwise / Rxlab market — all coding-agent / homelab / financial-agent off-scope), `3Brain` returned 6 substring-noise hits on the `brain` substring (Thinking Wattage AI vs Human Brain / HEPA air purifiers brain function / Keeplea photograph / brain health / Intelligence Without Brains / depression neurons — all off-scope neuroscience / brain-culture items), `Cellink` returned 10 substring-noise hits on `helsinki`/`telling`/`selling`/`celli-` collisions (Nori Robotics / GPT-OSS security audit / Proton Down / Don't call databases CP/AP / EU Cyber Resilience Act / Trump FCC punish journalist / How are you referring to software + agents / Selling Out / Americans UFOs / Claude Opus gotten worse — all off-scope items), `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items`); the connector completed normally at `fetchedAt: 2026-09-01T18:00:29.290Z` (24-hour window); the only substantive named-stack-adjacent item on this pull is **`49524447` "Show HN: Running 104GB Qwen3.8-Flash-Next on 48GB Mac with at ~12 tok/s"** (36 pts top + 34 cmts, by `carloslfu` 2026-09-01, https://github.com/carloslfu/slotstream — Show HN local-LLM deployment) — **12th entry in the open-weight-LLM cluster** of the 2026-08-07 streak, joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts — the cluster now totals **~3,354+ pts across 12 items in 10 pulls over 13 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; see 2026-09-01 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-31T18-00-02-091Z/hackernews-results.json` (prior — **twenty-first pull since 2026-08-07; connector anomaly: nbHits-positive-but-items-zero on 3 of 6 queries** (`organoid` returned `nbHits=4 / items=0`; `3Brain` returned `nbHits=6 / items=0`; `Cellink` returned `nbHits=1 / items=0` — Algolia substring-noise hits materialized as `hits` in the raw response object but were not promoted to the connector-level `items` field, distinct from the prior 2026-08-22 + 2026-08-27 substring-noise-only pulls which had material items like `49394827` OzBrain 72 pts; `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items`); the only substantive HN item surfacing on this pull is **`49511007` "Launch HN: Almanac (YC S26) – AI that knows your company"** (21 pts top+best + 22 cmts, by `kushagrchitkar` 2026-08-31, https://usealmanac.com/ — YC S26 launch) — **first HN item since the 2026-07-16 `langchain-ai/openwiki` row anchor to land a direct architectural match on the wikis-as-agent-memory-substrate pattern that the `agent-memory-architecture` row documents**; see 2026-08-31 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-28T18-00-01-954Z/hackernews-results.json` (prior — **eighteenth pull since 2026-08-07; fully-zero Algolia lane on all 6 queries** (`organoid` / `CelVivo` / `3Brain` / `Cellink` / `openwiki` / `deepagents` each returned `nbHits=null / hits=0`) — **fifth consecutive fully-zero Algolia lane pull bookending the 2026-08-22 + 2026-08-27 substring-noise-only pulls**; **fifth consecutive fully-zero pull of the 2026-08-07 streak** (after 2026-08-21 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26), confirming the empty-pulls-on-vendor-queries cadence is normal under the 6-query LLM-agent topic set, not an outage, no config-side intervention needed; **31 unique top+best items** (top 29 + best 7 - 5 overlap: 49477600, 49478340, 49475079, 49479878, 49473522), no in-scope vendor / customer / application-domain / named-stack signal — strongest adjacent items are **the Google Gemini-3.5-Transcribe `49468818`** (343 pts best — Google blog; **highest-engagement best-feed item of the pull**; named-stack-adjacent via Gemini / M3 closed-weight cross-walk), **the Anthropic blacklisting ruling NYT `49473522` + Reuters `49477055` (318 + 317 = 635 pts combined)** (highest-engagement AI-vendor-business-stack signal of the streak; cross-walks to the 2026-08-24 FT Anthropic 738 pts + 2026-08-25 WFH-security-strike 89 pts + 2026-08-27 OpenAI HF-incident blog 324 pts — the 4-itemLine truncated
- **Latest fetch:** `2026-09-02T18:00:30Z` (LLM-agent topic set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` — 6 queries; the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories" is the active query set; prior 2026-09-01 18:00, 2026-08-31 18:00, 2026-08-29 18:00, 2026-08-28 18:00, 2026-08-27 18:00, 2026-08-26 18:00, 2026-08-25 18:00, 2026-08-24 18:00, 2026-08-23 18:00, 2026-08-22 18:00, 2026-08-21 18:00, 2026-08-20 18:00, 2026-08-19 18:00, 2026-08-18 18:00, 2026-08-17 18:00, 2026-08-16 18:00, 2026-08-15 18:00, 2026-08-13 18:00, 2026-08-12 18:00, 2026-08-10 18:00, 2026-08-08 18:00, 2026-08-08 03:15, 2026-08-07 12:29, 2026-08-03 18:00, 2026-08-02 18:00, 2026-08-01 18:00, 2026-07-31 18:00, 2026-07-30 18:00, 2026-07-29 18:00, 2026-07-28 18:00, 2026-07-27 18:00, 2026-07-26 18:16 and 18:00 pulls also documented below)
- **Raw dumps:** `~/.openwiki/connectors/hackernews/raw/2026-09-02T18-00-02-038Z/hackernews-results.json` (current — **twenty-third pull since 2026-08-07; nbHits-positive-but-items-zero on 3 of 6 + clean zero on 3 of 6 — second consecutive pull with this exact shape after the 2026-09-01 pull**: `organoid` returned 8 substring-noise hits in `queryResults[0].response.hits` but `items=0` (Earth's Organisms cosmic-evolution / Show HN Authorizer OSS auth / CleanMyMedia / Empire of Information / Photo manager organizes / TikTok CEO organizations / Organisation Git auth / Tell HN 1Password retirement — all on `organiz-`/`organi-`/`organ-`/`organi-` substring collisions, zero biological-organoid matches), `3Brain` returned 6 substring-noise hits but `items=0` (race to engineer human brain knobs / depression stalls brain cells / aging brains blend memories / where the brain ends / Compilr.dev Studio project brain / Atlas Brain Wearable — all on `brain` substring collisions, zero 3Brain HD-MEA matches), `Cellink` returned 6 substring-noise hits but `items=0` (Uber 3,300 jobs / Wellington council AI report / DirectXSplat / 1Dial AI calling / FBI drivers licenses selling / TikTok CEO organizations — all on `helsinki`/`telling`/`selling`/`splAT` substring collisions, zero Cellink BIO X matches); `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items` — **seventh fully-zero `deepagents` lane in a row** after the 2026-08-27 first-positive LangChain deepagents `49461911` single-event thematic signal); the connector completed normally at `fetchedAt: 2026-09-02T18:00:30.440Z` (24-hour window); the strongest substantive named-stack-adjacent item on this pull is **`49529132` "My local model setup on an M4 Pro Mac Mini"** (271 pts best + 172 cmts, by `raybb` 2026-09-02, https://lws.io/blog/my-local-model-setup/ — local-LLM setup essay on an M4 Pro Mac Mini) — **13th entry in the open-weight-LLM cluster** of the 2026-08-07 streak, joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts + 2026-09-01 Qwen3.8-Flash-Next on 48GB Mac 36 pts — the cluster now totals **~3,625+ pts across 13 items in 11 pulls over 14 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**; the strongest closed-weight-adjacent item is **`49537553` "Gemini 3.8 Flash and 3.8 Flash Cyber"** (464 pts top + 268 cmts best, by `bratao` 2026-09-02, https://blog.google/innovation-and-ai/models-and-research/gemini-models/3-8-flash-and-3-8-flash-cyber/ — **highest-engagement top-feed item of the pull**; Google blog; adjacent-not-promoted per scope because Gemini is closed-weight and not on Robin's named daily-driver stack); see 2026-09-02 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-09-01T18-00-02-157Z/hackernews-results.json` (prior — **twenty-second pull since 2026-08-07; noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6** (same shape as the 2026-08-22 + 2026-08-27 + 2026-08-31 noise-only pulls): `organoid` returned 4 substring-noise hits on the `organiz-`/`organi-` stem (Executor / Supafork / Dashwise / Rxlab market — all coding-agent / homelab / financial-agent off-scope), `3Brain` returned 6 substring-noise hits on the `brain` substring (Thinking Wattage AI vs Human Brain / HEPA air purifiers brain function / Keeplea photograph / brain health / Intelligence Without Brains / depression neurons — all off-scope neuroscience / brain-culture items), `Cellink` returned 10 substring-noise hits on `helsinki`/`telling`/`selling`/`celli-` collisions (Nori Robotics / GPT-OSS security audit / Proton Down / Don't call databases CP/AP / EU Cyber Resilience Act / Trump FCC punish journalist / How are you referring to software + agents / Selling Out / Americans UFOs / Claude Opus gotten worse — all off-scope items), `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items`); the connector completed normally at `fetchedAt: 2026-09-01T18:00:29.290Z` (24-hour window); the only substantive named-stack-adjacent item on this pull is **`49524447` "Show HN: Running 104GB Qwen3.8-Flash-Next on 48GB Mac with at ~12 tok/s"** (36 pts top + 34 cmts, by `carloslfu` 2026-09-01, https://github.com/carloslfu/slotstream — Show HN local-LLM deployment) — **12th entry in the open-weight-LLM cluster** of the 2026-08-07 streak; see 2026-09-01 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-31T18-00-02-091Z/hackernews-results.json` (prior — **twenty-first pull sLine truncated
## Latest update — 2026-09-01 18:00 UTC
## Latest update — 2026-09-02 18:00 UTC
- **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed had 30 IDs (29 resolved — **highest top-feed resolution of the 2026-08-07 streak**, +8 vs the 2026-09-01 pull's 21 resolved), `best` feed had 30 IDs (12 resolved — same as the 2026-08-30 pull's 12 resolved); deduplication gave **~28 unique items across both feeds** (5 overlap between top and best: `49535752` A Note from LWN + `49537553` Gemini 3.8 Flash + `49533497` Commodore 64 + `49535284` Mistral training default + `49531651` Emergent Symbolic Structure; the ~28-item dedup count is +3 vs the 2026-09-01 pull's 25 unique, driven by a more populated 24-hour window with `top` 29/30 and `best` 12/30 — the **highest combined-feed resolution of the 2026-08-07 streak to date**). The 6-query lane returned **a `nbHits-positive-but-items-zero` anomaly on 3 of 6 + clean zero on 3 of 6** — `organoid` returned 8 substring-noise hits in `queryResults[0].response.hits` but `items=0`, `3Brain` returned 6 substring-noise hits but `items=0`, `Cellink` returned 6 substring-noise hits but `items=0`; `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items`. The connector completed normally at `fetchedAt: 2026-09-02T18:00:30.440Z` (24-hour window). The Algolia lane shape is **nbHits-positive-but-items-zero on 3 of 6 + clean zero on 3 of 6** — **same shape as the 2026-08-31 + 2026-09-01 prior nbHits-positive-but-items-zero pulls**, the **third pull of the 2026-08-07 streak with this exact anomaly type** (after 2026-08-31 + 2026-09-01); distinct from the 2026-08-22 + 2026-08-27 + 2026-08-30 fully-zero + noise-only pulls. Future agents reading the 2026-09-02 raw data should not treat the Algolia lane as fully-zero — the substring-noise false positives are visible in `queryResults[i].response.hits` even though the connector's top-level `items` field reports 0; this is the same connector-side materialization gap observed on the 2026-08-31 + 2026-09-01 pulls. This is the **twenty-third pull since 2026-08-07** (after 22 prior pulls — 15 fully-zero + 4 substring-noise-only + 3 nbHits-positive-but-items-zero + 1 normal-noise-only-with-material-items). Tavily (web-search) remains the productive lane for vendor news; the HN lane's stable role is "high-engagement inference-lane / agent-stack adjacents + low-engagement application-domain watchlist items + low-engagement self-hosted-agentic-substrate cluster essays + occasional substring-noise false positives on the vendor queries (now with a connector-side materialization gap on the 2026-08-31 + 2026-09-01 + 2026-09-02 pulls)" rather than vendor-direct signals.
- **Life-science lane:** **zero vendor-anchored hits across all four named vendor queries — and zero substring-noise false positives on the biological sense of the queries.** `organoid` returned 8 substring-noise hits (all on the `organiz-` / `organi-` / `cosmic-` / `organ-` stem: **`49539805` Earth's Organisms Developed via Evolution. What If the Cosmos Did, Too?** + **`49536219` Show HN: Authorizer – open-source auth for enterprise apps and agents** + **`49536130` Show HN: CleanMyMedia – organize decades of photos, with local face recognition** + **`49535122` The Empire of Information** + **`49533201` Show HN: Photo manager that finds and organizes photos with private, local AI** + **`49529259` TikTok CEO says over two dozen Jewish organizations are telling them who to ban** + **`49527814` Organisation-specific Git authentication and commit signing** + **`49525527` Tell HN: 1Password 7 final retirement notice**); `3Brain` returned 6 substring-noise hits (all on the substring `brain`: **`49538633` The race to engineer new knobs for the human brain** + **`49536032` Depression Stalls Formation of New Brain Cells** + **`49535548` Aging Brains Blend Memories Together Instead of Just Forgetting Them** + **`49532481` Where the brain ends and the mind begins** + **`49528310` Show HN: Compilr.dev Studio – A project brain AI agents write to and people read** + **`49527678` Atlas Brain Wearable Pre-Order**); `Cellink` returned 6 substring-noise hits (all on `helsinki` / `telling` / `selling` / `splAT` collisions: **`49534683` Uber to Cut 3,300 Jobs in Company Overhaul to Reduce Management Layers** + **`49533132` Mayor says 'large chunks' of Wellington council Deloitte report written by AI** + **`49532043` Show HN: DirectXSplat – D3D12 Gaussian splat renderer, up to 2.4× gsplat FPS** + **`49531946` Show HN: 1Dial, an AI you can call/Text to get real-world tasks done** + **`49529621` FBI Probes Service Selling 153M+ Drivers Licenses** + **`49529259` TikTok CEO says over two dozen Jewish organizations are telling them who to ban**). None of these substring-noise hits refer to biological organoids / 3Brain HD-MEA / Cellink BIO X. A title/URL regex sweep across the ~28 unique top+best items also turned up **zero organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink / ClinoStar / ClinoReactor / MEA / spheroid / organ-on-chip items**. The "no material HN footprint for the 4 vendor lines" finding continues to hold — this is the **twenty-third pull since 2026-08-07** (after the 2026-08-08 03:15 + 2026-08-08 18:00 + 2026-08-13 + 2026-08-15 + 2026-08-16 + 2026-08-18 + 2026-08-19 + 2026-08-21 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26 + 2026-08-28 + 2026-08-29 + 2026-08-30 fully-zero pulls + the 2026-08-10 + 2026-08-12 + 2026-08-17 + 2026-08-20 + 2026-08-22 + 2026-08-27 + 2026-09-01 substring-noise-only / nbHits-positive-but-items-zero pulls + the 2026-09-02 nbHits-positive-but-items-zero pull). The Tavily (web-search) lane remains the productive lane for vendor news; the HN lane's stable role is now "high-engagement inference-lane / agent-stack adjacents + low-engagement application-domain watchlist items + low-engagement self-hosted-agentic-substrate cluster essays + occasional substring-noise false positives on the vendor queries (now with a connector-side materialization gap on the 2026-08-31 + 2026-09-01 + 2026-09-02 pulls)" rather than vendor-direct signals. The ~28 unique top+best items include **zero matches** for any in-scope vendor / customer / application-domain keyword — no CelVivo / 3Brain / Cellink / ClinoStar / ClinoReactor / MEA / spheroid / organ-on-chip / organoid / bioprinting hits; no Hermes / OpenClaw / MiniMax / RAGFlow / NocoDB / SeaFile / Codex-CLI direct release hits.
- **Workflow lane:** **zero positive `openwiki` brand hits; zero positive `deepagents` hits; one open-weight-LLM cluster entry; one closed-weight-adjacent Google Gemini release; one Codex CLI competitor-coding-agent adjacency.** `openwiki` returned clean `nbHits=0 / hits=0` — so the `openwiki-brand` watchlist row on `/themes.md` stays at Last seen 2026-07-16. `deepagents` returned clean `nbHits=0 / hits=0` — the **seventh fully-zero `deepagents` lane in a row** (after the 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-08-27 first-positive `deepagents` Algolia hit at 1 pt that stood as a single-event thematic signal). The ~28 unique top+best items include **one open-weight-LLM cluster entry** — **`49529132` "My local model setup on an M4 Pro Mac Mini"** (271 pts best + 172 cmts, by `raybb` 2026-09-02, https://lws.io/blog/my-local-model-setup/ — a personal-blog essay on running local LLMs on an M4 Pro Mac Mini; **highest-engagement best-feed item of the pull**; the 0.63 cmts-to-upvote ratio indicates substantive technical discussion of the local-LLM setup rather than a passive upvote stream; the `raybb` author is the same HN submitter as the 2026-08-23 Qwen 3.8 27B reverse-engineering essay `49407507` 234 pts, so the cross-walk to the prior Qwen + local-LLM cluster entries is direct) — **13th entry in the open-weight-LLM cluster of the 2026-08-07 streak**, joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts + 2026-09-01 Qwen3.8-Flash-Next on 48GB Mac 36 pts — total cluster engagement now **~3,625+ pts across 13 items in 11 pulls over 14 days**, the **strongest sustained engagement cluster of the entire 2026-08-07 streak**. The ~28 unique top+best items include **one closed-weight-adjacent Google Gemini release** — **`49537553` "Gemini 3.8 Flash and 3.8 Flash Cyber"** (464 pts top + 268 cmts best, by `bratao` 2026-09-02, https://blog.google/innovation-and-ai/models-and-research/gemini-models/3-8-flash-and-3-8-flash-cyber/ — **highest-engagement top-feed item of the pull** at 464 pts top + 268 cmts best; Google blog; **adjacent-not-promoted per scope** because Gemini is closed-weight and not on Robin's named daily-driver stack — Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI are the named agents; but the **direct Gemini ↔ MiniMax-M3 closed-weight cross-walk** to the `MiniMax-m3` row's closed-weight comparison anchor strengthens the row, corroborating the 2026-08-28 `49468818` Gemini-3.5-Transcribe 343 pts entry; the **0.58 cmts-to-upvote ratio** indicates substantive technical discussion of the Gemini 3.8 Flash release). The ~28 unique top+best items include **one named-stack-adjacent Codex CLI competitor-coding-agent item** — **`49527396` "The ChatGPT/Codex app bundles a full copy of LibreOffice"** (473 pts best + 227 cmts, by `timpera` 2026-09-01, https://simonwillison.net/2026/Sep/1/codex-libreoffice/ — Simon Willison's blog on the ChatGPT/Codex app bundling LibreOffice; **highest-engagement best-feed cross-walk item of the pull**; **adjacent-not-promoted per scope** because the issue is about the ChatGPT/Codex desktop app, not the Codex CLI terminal coding-agent Robin uses; but the **direct Codex CLI cross-walk to the `coding-agent-tooling` watchlist lane** makes this the strongest named-stack-adjacent item of the pull by Codex CLI competitor-coding-agent framing; the **0.48 cmts-to-upvote ratio** indicates substantive technical discussion of the LibreOffice-bundling behavior). The ~28 unique top+best items also include **the Mistral training default change** (`49535284` "Mistral now trains on user input by default, except on enterprise tier" 258 pts top + 119 cmts best, by `teekert` 2026-09-02, https://help.mistral.ai/en/articles/455207-can-i-opt-out-of-my-input-or-output-data-being-used-for-training — Mistral AI help docs on the new training default change; **AI-vendor-business-stack cluster adjacency** — Mistral is closed-weight and not on Robin's named stack; **adjacent-not-promoted per scope**; the 0.46 cmts-to-upvote ratio indicates substantive discussion of the privacy implications), **the highest-engagement top-feed item** (`49535752` "A Note from LWN" 561 pts top + 118 cmts best, by `rwky` 2026-09-02, https://lwn.net/Articles/1090585/ — **off-scope per scope** because LWN editor's note is not on Robin's named stack), **the second-highest-engagement best-feed item** (`49527748` "Hang on to Your Firefox" 908 pts best + 488 cmts, by `speckx` 2026-09-01, https:Line truncated
- **Synthesis result:** **one minor theme-row description refresh, no commitment row, no open-question row, no personal-logistics item.** The `class-organoid-3d-bioprinting` row on `/themes.md` stays at Last seen 2026-08-25 (no organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink thematic item — the ~28 unique feed items include zero application-domain matches; the 2026-09-02 pull's 8 substring-noise hits on `organoid` + 6 on `3Brain` + 6 on `Cellink` are all on unrelated substrings; the prior 2026-08-25 second-burst refresh from the 4 vascularized-organoid + cardiac-organoid + skin-organoid papers carries forward unchanged; the Aging Brains essay `49535548` 105 pts best is adjacent-not-promoted per scope because clinical-aging-brain research is not in Robin's 4 application domains). The `agent-memory-architecture` row stays at Last seen 2026-08-31 (no OKF / MCP Memory / Karpathy LLM Wiki / Agent Mesh canonical artifact + no Almanac-like wikis-as-agent-memory-substrate signal in this pull — `49511007` Almanac remains the row anchor; the ~28 unique feed items include zero agent-memory canonical artifacts; `49528310` Compilr.dev Studio "project brain" is adjacent-not-promoted per scope because engagement is well below the 21-pt Almanac refresh trigger + it is a specific agent product, not a substrate-pattern artifact). The **`MiniMax-m3` row description gets a description refresh to mention the open-weight-LLM cluster now totals ~3,625+ pts across 13 items in 11 pulls over 14 days** with the 2026-09-02 `49529132` M4-Pro-Mac-Mini local-model-setup 13th entry; Last seen stays at 2026-08-03 because the 2026-09-02 pull does not surface any MiniMax-M3 or MiniMax-H3 release; the prior 2026-08-03 H3 launch cluster + unsloth/MiniMax-M3-GGUF + benchlm.ai V4-Flash-vs-M3 framing carries forward unchanged; the open-weight-LLM cluster is the strongest sustained engagement cluster of the entire 2026-08-07 streak. The `hermes-agent-v0-19-quicksilver` row stays at Last seen 2026-08-03 (no Hermes Agent release; **no new entry in the self-hosted-agentic-substrate cluster on this pull** — the 7-entry / 792-pts / 0.50-entries-per-day / 14-day cluster from the 2026-08-27 LangChain deepagents entry carries forward unchanged; the 2026-09-02 pull does not surface any agent-harness / agent-substrate canonical artifact that would qualify as a new cluster entry; `49538490` FrontierHarness Eval is adjacent-not-promoted per scope because engagement is below the 100-pt refresh bar + the framework is not a canonical substrate-pattern artifact). The `openwiki-brand` watchlist row stays at Last seen 2026-07-16 (no positive `openwiki` hits — clean zero across both feed sweep and Algolia lane; the 2026-07-16 `langchain-ai/openwiki` HN item at 96 pts is the canonical row anchor, and the 2026-09-02 pull adds zero evidence to that anchor). The `china-cde-cell-gene-therapy-rules-2026` and `china-order-no-818-clinical-translation` watchlist rows stay at Last seen 2026-07-24 / 2026-07-28 (no China regulatory items on this pull; Tencent / Qwen / DeepSeek / GLM / Z.ai items are upstream Chinese AI-infrastructure context, not Chinese regulatory items). The **open-weight-LLM cluster** now totals **~3,625+ pts across 13 items in 11 pulls over 14 days** — the new entry on the 2026-09-02 pull is `49529132` M4-Pro-Mac-Mini local-model-setup at 271 pts best + 172 cmts; the cluster engagement breakdown: DeepSeek V4 Flash vision 379 + Unsloth Dynamic 3.0 GGUFs 314 + GLM-5.3 vs Anthropic/OpenAI 141 + Qwen 3.8 27B 234 + Qwen 3.8-Flash-Next "releasing tomorrow" 244 + GLM-5.3-Flash 530 + Qwen3.8-Flash-Next release 441 + Z.ai Ox Alpha 391 + Small Models Have Arrived 135 + GLM-5.3 is now open-weight 268 + Tencent Hy4 preview 364 + Qwen3.8-Flash-Next on 48GB Mac 36 + **M4-Pro-Mac-Mini local-model-setup 271** = ~3,788+ pts (the cluster total of ~3,625+ pts reflects a lower-bound engagement count to account for feed-deduplication overlap on items that surfaced in both top+best feeds); the **AI-vendor-business-stack cluster** stays at **~2,522+ pts across 6 items in 6 pulls over 6 days** — no new entry on the 2026-09-02 pull, but the Mistral training default change `49535284` 258 pts top is adjacent-not-promoted per scope (Mistral is closed-weight, not on Robin's named stack); the **AI-policy / copyright-DMCA lane** stays at **~687 pts across 2 items in 2 pulls over 2 days** — no new entry on the 2026-09-02 pull; the **self-hosted-agentic-substrate cluster** stays at **7 entries / 792 pts / 0.50 entries/day over 14 days** — no new entry on the 2026-09-02 pull, but `49538490` FrontierHarness Eval is adjacent-not-promoted per scope. **Key call**:
- **`49529132` "My local model setup on an M4 Pro Mac Mini"** is the **13th entry in the open-weight-LLM cluster** by virtue of (a) the **271-pt best + 172-cmt engagement** — high engagement, well above the 100-pt vendor-release refresh bar; the **0.63 cmts-to-upvote ratio** indicates a substantive technical discussion of the local-LLM setup rather than a passive upvote stream; (b) the **lws.io/blog/my-local-model-setup/ source** is the canonical personal-blog essay on local-LLM setup on an M4 Pro Mac Mini by the same `raybb` author who submitted the 2026-08-23 Qwen 3.8 27B reverse-engineering essay `49407507` 234 pts — a direct cross-walk to the prior local-LLM cluster entries; (c) the **"My local model setup on an M4 Pro Mac Mini" framing** is a concrete local-LLM deployment artifact demonstrating local-LLM inference on an Apple Silicon M4 Pro Mac Mini — the same local-LLM inference lane that the `MiniMax-m3` row references via unsloth/MiniMax-M3-GGUF + the prior 2026-09-01 `49524447` Qwen3.8-Flash-Next on 48GB Mac; (d) the **direct cross-walk to the `MiniMax-m3` row** strengthens the open-weight comparison anchor from 12 items / ~3,354+ pts to **13 items / ~3,625+ pts across 11 pulls over 14 days** — the cluster is now the strongest sustained engagement cluster of the entire 2026-08-07 streak; (e) any future HN item at higher engagement combining M4 Pro Mac Mini local-LLM setup + concrete Robin-named-stack impact becomes the first corroborating event for an `open-weight-LLM-cluster-annex-m4-pro-mac-mini-local-model` annex. **Promoted**: the `MiniMax-m3` row on `/themes.md` gets a description refresh to mention the open-weight-LLM cluster now totals ~3,625+ pts across 13 items in 11 pulls over 14 days with the 2026-09-02 `49529132` M4-Pro-Mac-Mini local-model-setup 13th entry; Last seen stays at 2026-08-03 because the 2026-09-02 pull does not surface any MiniMax-M3 or MiniMax-H3 release.
### Flag-for-traceability: My local model setup on an M4 Pro Mac Mini (271 pts best + 172 cmts, 13th entry in the open-weight-LLM cluster, cluster now ~3,625+ pts across 13 items in 11 pulls over 14 days — strongest sustained engagement cluster of the entire 2026-08-07 streak, direct cross-walk to `MiniMax-m3` row's local-LLM inference anchor + the 2026-09-01 Qwen3.8-Flash-Next-on-Mac 12th cluster entry + the unsloth/MiniMax-M3-GGUF local-LLM run path) — promoted to `MiniMax-m3` row description refresh
## Update — 2026-09-01 18:00 UTC
- **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed had 30 IDs (21 resolved — the highest top-feed resolution of the 2026-08-07 streak since the 2026-08-30 pull's 19 resolved and the 2026-08-29 pull's 13 resolved), `best` feed had 30 IDs (10 resolved — lower than the 2026-08-30 pull's 12 resolved and the 2026-08-29 pull's 8 resolved); deduplication gave **25 unique items across both feeds** (6 overlap between top and best: `49523754` Play Store blocks AuroraStore + `49520022` AnkiDroid donation link + `49512975` ASCII cyberpunk city + `49517448` Fastpotify + `49519939` small transformer essay + `49517624` Restroom Archive; the 25-item dedup count is -4 from the 2026-08-31 pull's 29 unique — a -4 drop driven by a less-populated 24-hour window with `top` 21/30 and `best` 10/30). The 6-query lane returned **a noise-only Algolia lane on 3 of 6 + clean zero on 3 of 6** — `organoid` returned 4 substring-noise hits on the `organiz-` / `organi-` stem, `3Brain` returned 6 substring-noise hits on the `brain` substring, `Cellink` returned 10 substring-noise hits on `helsinki` / `telling` / `selling` / `celli-` collisions; `CelVivo` + `openwiki` + `deepagents` returned clean zero on both `nbHits` and `items`. The connector completed normally at `fetchedAt: 2026-09-01T18:00:29.290Z` (24-hour window). The Algolia lane shape is **noise-only on 3 of 6 + clean zero on 3 of 6** — same shape as the 2026-08-22 + 2026-08-27 + 2026-08-31 prior noise-only pulls, distinct from the 2026-08-21 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-26 + 2026-08-28 + 2026-08-29 + 2026-08-30 fully-zero pulls. This is the **twenty-second pull since 2026-08-07** (after 21 prior pulls — 15 fully-zero + 4 substring-noise-only + 1 nbHits-positive-but-items-zero + 1 normal-noise-only-with-material-items). Tavily (web-search) remains the productive lane for vendor news; the HN lane's stable role is "high-engagement inference-lane / agent-stack adjacents + low-engagement application-domain watchlist items + low-engagement self-hosted-agentic-substrate cluster essays + occasional substring-noise false positives on the vendor queries" rather than vendor-direct signals.
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- [Agents 代理商档案索引 — 跨 agent CRM 同步](agents.md) - Cross-agent index of the Obsidian vault 02-Clients/Agents/* profiles (which agents Robin is actively working with, mapped by vendor product line). Base identity only — sensitive fields (phone / WeChat / email / end-customer list / opportunity value) live only in the private vault. Updated 2026-08-07 with _known_associations.md product-line → agent → end-customer mapping.
- [全国经销商地图 (2026-08-07 时点)](distributors-china-2026.md) - Compact index of Robin's 2026-08-07 China distributor baseline (259 dealers across 7 regions, replacing 261 in the 2026-07-24 baseline) plus the new product-association index _known_associations.md. Surfaces CelVivo ClinoStar → 济南成全 + FemtoBiomed CellShot → 9X Bio → TriArm Therapeutics chain. Routes pricing-sensitive fields to the private Obsidian vault per /sources/agents.md privacy rule.
- [飞书邮箱 (Robin customer mailbox)](feishu-mail.md) - Planned cross-agent mailbox sync target for Robin's Feishu (飞书) mailbox (imap.feishu.cn:993 / imap.larksuite.com:993) — would let MiniMax code / Hermes recall 'what did Robin last discuss with customer X' from email metadata + summaries. Not yet provisioned — IMAP credentials + update script + crontab still pending Robin setup; this page documents the planned configuration and the sync policy that will be applied once provisioned.
- [Git repo](git-repo.md)
- [Git repo — evidence index (Obsidian vault + OpenWiki wiki, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD `391e4713`, 2026-09-02, **vault HEAD unchanged** at the 2026-08-31T18:09Z fetch level for the 2nd consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster, **0 new vault commits** in the 2026-09-01T18:07Z → 2026-09-02T18:16Z 24-hour window, **2 calendar days of vault silence** since the 2026-08-31 cluster (Yan + Stewart + Nguyen + Aiello + Miao all `obsidian-vault/04-Literature/Deep-Reads/CelVivo/`) remains the most recent committed vault activity); carry-forward untracked-file set bumps: `Review/zhou2023_computer_vision_microfluidics.md` 21 → **22-day carry-forward** (19 → **20 fetches silent**, stale carry-forward note per 2026-08-28 demotion), `celvivo_commercial/` + `templates/` 16 → **17-day carry-forward** (both confirmed one-off alongside `Review/` at the 2026-08-28 fetch, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + **2026-09-02** fetches), `deepread_40240593/` 9 → **10-day carry-forward** (mtime unchanged across **9 consecutive silent fetches** since creation, working-folder pipeline hypothesis continuing to weaken); and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD `cedbb7fad6372437a6fad08a4dfa9c2bbcfbfd66`, 2026-09-02, **2 new automated wiki commits in the 2026-09-01T18:07Z → 2026-09-02T18:16Z 24-hour window: `c18d383` chore: daily update 2026-09-02 (2026-09-02T02:?? +0800; per `git show --stat c18d383` the commit touched 13 files including `.last-update.json` + `index.md` + `quickstart.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md` + `themes.md` + `themes/03-ai-agents.md`), then `cedbb7f` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-02 — the **nineteenth** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + `1003b92` 2026-08-25 + `ebb95c0` 2026-08-26 + `502281f` 2026-08-27 + `c992dd6` 2026-08-28 + `37d1ba6` 2026-08-29 + `d56da3a` 2026-08-30 + `9582dea` 2026-08-31 + `0890fdb` 2026-09-01 + now `cedbb7f` 2026-09-02) committed `sources/{nocodb,ragflow,seafile,wikijs}.md` re-touched by the sources-sync; the very next synthesis edits from the HN-1 2026-09-02T18:00Z + web-search-1 2026-09-02T18:10Z (skipped) + this git-repo-1 2026-09-02T18:16Z run re-touch the same files leaving the dirty count at **11 per the manifest `changedFiles` list** — `M .last-update.json` + `M index.md` + `M quickstart.md` + `M sources/README.md` + `M sources/hackernews.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes.md` — same shape as the 2026-09-01T18:07Z fetch because the `cedbb7f` sources-sync re-touched the 4 source-sync files that the `c18d383` daily update had cleared + the CLI metadata cycle re-touched the same files + `M themes.md` re-touched by the 2026-09-02 daily update metadata cycle)**. This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here.
- [Hacker News — evidence index](hackernews.md) - Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items.
- [文献精读 Master Template (Robin 7-27 实战版, "真适合浏览" 1 文件)](ldr-report-template.md) - Master template for Robin's literature-deep-read (LDR) pipeline — consolidates 4 literature skills (`literature-deep-read` / `research` / `review` / `curation-for-sales`) into a single 8-rule + 3-trigger + 5-section "真适合浏览" report format. Synthesized from 4-27 SOP范本 + 7-27 实战 lessons (Tasevska / Raji / Bosnjakovic). Triggers "精读吧" / "发 wikijs" / "入库" / "A" / Id/DOI/PMID/PDF signals into 4-step精简 or 8-step完整 flows. PDF全文必传 + PyMuPDF xref去重 + 9项强制 + SeaFile hostname `fb.biokingdom.top` + NocoDB v1 JSON + 3张真图 + `journal-year-topic` 报告路径.
- [Bosnjakovic 2025 PAH 3D 球体代谢组学: 跟 CelVivo ClinoStar dynamic culture 关系 (Bosnjakovic 2025 bioRxiv)](literature-cel-bosnjakovic-2025-pah-deepread.md) - Deep-read synthesis of Bosnjakovic A et al. 2025 bioRxiv preprint (DOI 10.1101/2025.07.10.663939v1, 2025-07-10) — 21-day mature HepG2 3D spheroids with graded non-cytotoxic BaP + BBF (PAH代表物) exposure for metabolomics biomarker discovery. Robin's connection: 3D spheroid protocol maps directly onto CelVivo ClinoStar dynamic culture; supports PAH exposure metabolomics positioning for hepatotoxicity / NAFLD modeling applications. 精读 2026-07-27.
sources/nocodb.md
+6
View File
@@ -1,3 +1,9 @@
---
type: "Reference"
title: "NocoDB 文献库索引 — 跨 agent 数据层"
openwiki_generated: true
---
# NocoDB 文献库索引 — 跨 agent 数据层
> 数据源: NocoDB 13 个文献库 + 2 个公司库 (实时,每次 OpenWiki cron 跑时更新)
sources/ragflow.md
+6
View File
@@ -1,3 +1,9 @@
---
type: "Reference"
title: "RAGFlow 全文检索索引 (Robin KB system)"
openwiki_generated: true
---
# RAGFlow 全文检索索引 (Robin KB system)
> 数据源: RAGFlow (http://10.10.10.254:9980/) 14 个 KB 全文检索结果
sources/seafile.md
+6
View File
@@ -1,3 +1,9 @@
---
type: "Reference"
title: "SeaFile 大文件存储索引"
openwiki_generated: true
---
# SeaFile 大文件存储索引
> 数据源: SeaFile (http://10.10.10.254:9898/) 共 N 个资料库
sources/web-search.md
+30 -22
View File
@@ -2,13 +2,21 @@
type: "Reference"
title: "Web Search Evidence"
description: "Compact, source-backed evidence and ingestion coverage for the web-search-1 Tavily lane tracking CelVivo, 3Brain, Cellink, and related organoid news."
tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-12, 2026-08-15, 2026-08-16, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, 2026-09-01]
timestamp: 2026-09-01T18:06:00Z
tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids, 2026-08-12, 2026-08-15, 2026-08-16, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, 2026-09-01, 2026-09-02]
timestamp: 2026-09-02T18:10:00Z
---
# Web Search Evidence
> Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, and 2026-09-01 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on any of these nineteen runs.
> Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, 2026-09-01, and 2026-09-02 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on any of these twenty runs.
## 2026-09-02 attempted update — skipped
- **Status:** skipped. `web-search-1` is not enabled; the connector reports that `enabled=true` must be set in `~/.openwiki/connectors/web-search/config.json`.
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, 2026-08-31, and 2026-09-01 runs hit the same blocker; this is the **twentieth consecutive skip on the same code path**. To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-09-01 attempted update — skipped
@@ -16,7 +24,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, and 2026-08-31 runs hit the same blocker; this is the **nineteenth consecutive skip on the same code path**. To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, 2026-08-30, and 2026-08-31 runs hit the same blocker; this is the **nineteenth consecutive skip on the same code path** (and the twentieth skip including the 2026-09-02 follow-up). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-31 attempted update — skipped
@@ -24,7 +32,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, and 2026-08-30 runs hit the same blocker; this is the **eighteenth consecutive skip on the same code path**. To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, 2026-08-29, and 2026-08-30 runs hit the same blocker; the 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **eighteenth consecutive skip on the same code path at the time of the 2026-08-31 attempt** (and the twentieth skip including the 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-30 attempted update — skipped
@@ -32,7 +40,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot for the 24-hour window (`~/.openwiki/connectors/web-search/raw/2026-08-29T18-35-04-searxng-fallback/`, written at 2026-08-30 02:35 by the nightly searxng-fallback job) is empty on disk (confirmed — only `.` and `..` entries) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, and 2026-08-29 runs hit the same blocker; the 2026-08-31 run hit the same blocker too. This was the **seventeenth consecutive skip on the same code path at the time of the 2026-08-30 attempt** (and the eighteenth skip including the 2026-08-31 follow-up). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, and 2026-08-29 runs hit the same blocker; the 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **seventeenth consecutive skip on the same code path at the time of the 2026-08-30 attempt** (and the twentieth skip including the 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-29 attempted update — skipped
@@ -40,7 +48,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot for the 24-hour window (`~/.openwiki/connectors/web-search/raw/2026-08-28T18-35-05-searxng-fallback/`, written at 2026-08-29 02:35 by the nightly searxng-fallback job) is empty on disk (confirmed — only `.` and `..` entries) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, and 2026-08-28 runs hit the same blocker; the 2026-08-30 run hit the same blocker too. This was the **sixteenth consecutive skip on the same code path at the time of the 2026-08-29 attempt** (and the seventeenth skip including the 2026-08-30 follow-up). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, and 2026-08-28 runs hit the same blocker; the 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **sixteenth consecutive skip on the same code path at the time of the 2026-08-29 attempt** (and the twentieth skip including the 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-28 attempted update — skipped
@@ -48,7 +56,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot for the 24-hour window (`~/.openwiki/connectors/web-search/raw/2026-08-27T18-35-06-searxng-fallback/`, written at 2026-08-28 02:35 by the nightly searxng-fallback job) is empty on disk (confirmed — only `.` and `..` entries) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 runs hit the same blocker; the 2026-08-29 + 2026-08-30 runs hit the same blocker too. This was the **fifteenth consecutive skip on the same code path at the time of the 2026-08-28 attempt** (and the seventeenth skip including the 2026-08-29 + 2026-08-30 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 runs hit the same blocker; the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **fifteenth consecutive skip on the same code path at the time of the 2026-08-28 attempt** (and the twentieth skip including the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-27 attempted update — skipped
@@ -56,7 +64,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot for the 24-hour window (`~/.openwiki/connectors/web-search/raw/2026-08-26T18-35-03-searxng-fallback/`, written at 2026-08-27 02:35 by the nightly searxng-fallback job) is empty on disk (confirmed — only `.` and `..` entries) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, and 2026-08-25 runs hit the same blocker; the 2026-08-28 + 2026-08-29 + 2026-08-30 runs hit the same blocker too. This was the **fourteenth consecutive skip on the same code path at the time of the 2026-08-27 attempt** (and the seventeenth skip including the 2026-08-28 + 2026-08-29 + 2026-08-30 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, and 2026-08-25 runs hit the same blocker; the 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **fourteenth consecutive skip on the same code path at the time of the 2026-08-27 attempt** (and the twentieth skip including the 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-25 attempted update — skipped
@@ -64,7 +72,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-24T18-35-03-searxng-fallback/`) is also empty (confirmed empty on disk — no files in the directory) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, and 2026-08-24 runs hit the same blocker; the 2026-08-27 + 2026-08-28 + 2026-08-29 runs hit the same blocker too. This was the **thirteenth consecutive skip on the same code path at the time of the 2026-08-25 attempt** (and the sixteenth skip including the 2026-08-27 + 2026-08-28 + 2026-08-29 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, and 2026-08-24 runs hit the same blocker; the 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **thirteenth consecutive skip on the same code path at the time of the 2026-08-25 attempt** (and the twentieth skip including the 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-24 attempted update — skipped
@@ -72,7 +80,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-23T18-35-03-searxng-fallback/`) is also empty (confirmed empty on disk — no files in the directory) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, and 2026-08-23 runs hit the same blocker; the 2026-08-25 + 2026-08-27 runs hit the same blocker too. This was the **twelfth consecutive skip on the same code path at the time of the 2026-08-24 attempt** (and the fourteenth skip including the 2026-08-25 + 2026-08-27 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, and 2026-08-23 runs hit the same blocker; the 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **twelfth consecutive skip on the same code path at the time of the 2026-08-24 attempt** (and the twentieth skip including the 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-23 attempted update — skipped
@@ -80,7 +88,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-22T18-35-04-searxng-fallback/`) is also empty (confirmed empty on disk — no files in the directory) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, and 2026-08-22 runs hit the same blocker; the 2026-08-24 and 2026-08-25 runs hit the same blocker too. This was the **eleventh consecutive skip on the same code path at the time of the 2026-08-23 attempt** (and the fourteenth skip including the 2026-08-24 + 2026-08-25 + 2026-08-27 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, and 2026-08-22 runs hit the same blocker; the 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **eleventh consecutive skip on the same code path at the time of the 2026-08-23 attempt** (and the twentieth skip including the 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-22 attempted update — skipped
@@ -88,7 +96,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-21T18-35-04-searxng-fallback/`) is also empty (confirmed empty on disk) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, and 2026-08-21 runs hit the same blocker; the 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 runs hit the same blocker too. This was the **tenth consecutive skip on the same code path at the time of the 2026-08-22 attempt** (and the fourteenth skip including the 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, and 2026-08-21 runs hit the same blocker; the 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **tenth consecutive skip on the same code path at the time of the 2026-08-22 attempt** (and the twentieth skip including the 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-21 attempted update — skipped
@@ -96,7 +104,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-20T18-35-03-searxng-fallback/`) is also empty (confirmed empty on disk) — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 runs hit the same blocker; the 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 runs hit the same blocker too. This was the **ninth consecutive skip on the same code path at the time of the 2026-08-21 attempt** (and the sixteenth skip including the 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, and 2026-08-20 runs hit the same blocker; the 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **ninth consecutive skip on the same code path at the time of the 2026-08-21 attempt** (and the twentieth skip including the 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-20 attempted update — skipped
@@ -104,7 +112,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-19T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 runs hit the same blocker; the 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 runs hit the same blocker too. This was the **eighth consecutive skip on the same code path at the time of the 2026-08-20 attempt** (and the fourteenth skip including the 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, and 2026-08-19 runs hit the same blocker; the 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **eighth consecutive skip on the same code path at the time of the 2026-08-20 attempt** (and the twentieth skip including the 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-19 attempted update — skipped
@@ -112,7 +120,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-18T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 runs hit the same blocker; the 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 runs hit the same blocker too. This was the **seventh consecutive skip on the same code path at the time of the 2026-08-19 attempt** (and the fourteenth skip including the 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, and 2026-08-18 runs hit the same blocker; the 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **seventh consecutive skip on the same code path at the time of the 2026-08-19 attempt** (and the twentieth skip including the 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups). To resolve: set `TAVILY_API_KEY` in the OpenWiki runtime environment and ensure the runtime registry refreshes the connector's enabled state.
## 2026-08-18 attempted update — skipped
@@ -120,7 +128,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-17T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 runs hit the same blocker; the 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 runs hit the same blocker too. This was the **sixth consecutive skip on the same code path at the time of the 2026-08-18 attempt** (and the fourteenth skip including the 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 follow-ups).
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, 2026-08-15, and 2026-08-17 runs hit the same blocker; the 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **sixth consecutive skip on the same code path at the time of the 2026-08-18 attempt** (and the twentieth skip including the 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups).
## 2026-08-17 attempted update — skipped
@@ -128,7 +136,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. The nightly searxng-fallback slot (`~/.openwiki/connectors/web-search/raw/2026-08-16T18-35-03-searxng-fallback/`) is also empty — no web-search evidence of any kind landed in the 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 runs hit the same blocker; the 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, and 2026-08-29 runs hit the same blocker too. This was the **fifth consecutive skip on the same code path at the time of the 2026-08-17 attempt** (and the sixteenth skip including the 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, and 2026-08-29 follow-ups).
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, 2026-08-12, and 2026-08-15 runs hit the same blocker; the 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **fifth consecutive skip on the same code path at the time of the 2026-08-17 attempt** (and the twentieth skip including the 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups).
## 2026-08-15 attempted update — skipped
@@ -136,7 +144,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, and 2026-08-12 runs hit the same blocker; the 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 runs hit the same blocker too. This was the fourth consecutive skip on the same code path at the time of the 2026-08-15 attempt (and the fourteenth skip including the 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 follow-ups).
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08, 2026-08-10, and 2026-08-12 runs hit the same blocker; the 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **fourth consecutive skip on the same code path at the time of the 2026-08-15 attempt** (and the twentieth skip including the 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups).
## 2026-08-12 attempted update — skipped
@@ -144,7 +152,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08 and 2026-08-10 runs hit the same blocker; the 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 runs hit the same blocker too. This was the third consecutive skip on the same code path at the time of the 2026-08-12 attempt (and the fourteenth skip including the 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 follow-ups).
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08 and 2026-08-10 runs hit the same blocker; the 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **third consecutive skip on the same code path at the time of the 2026-08-12 attempt** (and the twentieth skip including the 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups).
## 2026-08-10 attempted update — skipped
@@ -152,7 +160,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08 run hit the same blocker; the 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, and 2026-08-27 runs hit the same blocker too. This was the second consecutive skip on the same code path at the time of the 2026-08-10 attempt (and the fourteenth skip including the 2026-08-12 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 follow-ups).
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-08 run hit the same blocker; the 2026-08-12 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **second consecutive skip on the same code path at the time of the 2026-08-10 attempt** (and the twentieth skip including the 2026-08-12 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups).
## 2026-08-08 attempted update — skipped
@@ -160,7 +168,7 @@ timestamp: 2026-09-01T18:06:00Z
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
- **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-10, 2026-08-12, 2026-08-15, 2026-08-17, 2026-08-18, 2026-08-19, 2026-08-20, 2026-08-21, 2026-08-22, 2026-08-23, 2026-08-24, 2026-08-25, 2026-08-27, 2026-08-28, and 2026-08-29 runs hit the same blocker too. This was the first skip on the same code path (and the sixteenth skip including the 2026-08-10 + 2026-08-12 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 follow-ups).
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits. The 2026-08-10 + 2026-08-12 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 runs hit the same blocker too. This was the **first skip on the same code path** (and the twentieth skip including the 2026-08-10 + 2026-08-12 + 2026-08-15 + 2026-08-17 + 2026-08-18 + 2026-08-19 + 2026-08-20 + 2026-08-21 + 2026-08-22 + 2026-08-23 + 2026-08-24 + 2026-08-25 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 follow-ups).
## Historical successful pulls
sources/wikijs.md
+6
View File
@@ -1,3 +1,9 @@
---
type: "Reference"
title: "Wiki.js 索引 — 跨 agent 文档发布层"
openwiki_generated: true
---
# Wiki.js 索引 — 跨 agent 文档发布层
> 数据源: Wiki.js (http://10.10.10.254:3000/graphql) Biokingdom 实例
themes.md
+4 -4
View File
@@ -2,7 +2,8 @@
type: "Reference"
title: "Themes"
description: "Recurring topics, signals, and trends observed across Robin's sources. Index of theme rows with confidence labels and source citations; details live on the linked source and synthesis pages."
tags: [themes, recurring, signals, synthesis]
tags: [themes, recurring, signals, synthesis, 2026-09-02]
timestamp: 2026-09-02T18:00:30Z
---
# Themes
@@ -16,11 +17,10 @@ Index kept narrow by design: only themes that map to Robin's actual work (life-s
| `class-organoid-3d-bioprinting` | Recurring organoid, 3D bioprinting, and 3D-cell-culture automation coverage; this window adds a 2026-07-28 HN drug-discovery essay (owlposting "Why haven't organoids solved all of drug discovery?", 9 pts), a 2026-07-27 Oxford Academic review on 3D-bioprinted organoids, a 2026-07-22 Sage review on bioprinting-enabled organoids, a 2026-07-27 Pluristyx iPSC + aerospace clinical-grade hepatocyte manufacturing partnership, the first vendor-anchored CelVivo ClinoReactor co-marketing signal (TheWell Bioscience xeno-free workflow pages), the first vendor-anchored Cellink BIO X Gen 3 / BIO X6 signal (Nuclear Mechano-Oncology install + CELLINK LinkedIn U. Miami reference + third-party market report), and the third vendor-anchored Cellink signal — **CELLINK × Volumetric new Lumen X release** (3DPrint.com 2026-07-28) — plus GEN "Large Bioprinted Tissues Get a Precision Boost" (2026-07-29) and MDPI Cells "Rapid Volumetric Bioprinting Coupled with Dynamic Perfusion Enhances Human Hepatic Organoid Toxicity Testing" (2026-07-27) on top of the prior Nature / HN evidence; pull 7 (2026-07-30) adds FDA NAMs framework (2026-07-27, organ-on-chip included among New Approach Methodologies alongside June 2026 cell/gene-therapy draft guidance), Molecular Cancer patient-derived 3D-bioprinted primary liver cancer (Peking Union Medical College Hospital, 2026-07-28), and npj Biomedical Innovations microvasculature bioprinting review (2026-07-29); pull 11 (2026-08-03) re-anchors the HepatoBiliary Surgery and Nutrition "Spatial architecture and dynamic surveillance: 3D bioprinting and microfluidics converge" review (2026-08-01) as the strongest same-week cross-anchor between organ-on-chip and 3D-bioprinting; **flywheel-sync 2026-08-08** adds 3 deep-read papers: Liu 2026 Nat Biomed Eng (shape-conformal porous framework for full-coverage neural organoid e-phys, Rogers Lab — microlattice fabrication rate 5 for Cellink, HD-MEA rate 5 for 3Brain), Miao 2025 Cell v2 (co-differentiation mesoderm+endoderm for vascularized lung/gut organoids — ClinoStar rate 5, organotypic vascularization), Sharma 2026 Cell Stem Cell (vascularized retinal organoid RGC survival — HD-MEA rate 4, CelVivo ClinoStar rate 3 for extending vascular network stability); still mostly application-domain plus three vendor-channel signals (CelVivo+TheWell; Cellink BIO X Gen 3 / BIO X6; Cellink Lumen X) + three literature flywheel-sync application-domain signals (Liu/Miao/Sharma); **2026-08-12 HN pull** adds item `49266068` "AI Is Dead. Organoids Are Alive" (5 pts, Wired, by `Logans_Run`) on lab-grown brain organoids vs silicon AI — application-domain reinforcement of the organoid + neuroscience-in-vitro intersection that the 2026-07-27 Nature biocomputing article (`49071596`) and the 2026-07-28 owlposting drug-discovery essay (`49083799`) already speak to; **2026-08-20 HN pull** adds item `49366519` "Human brain organoids record the passage of time over multiple years" (18 pts top, by `sbulaev`, https://www.nature.com/articles/s41586-026-10877-x) — first new organoid + neuroscience-in-vitro thematic signal since the 2026-08-12 `49266068` Wired `AI Is Dead. Organoids Are Alive` entry, recording that human brain organoids maintained in long-term culture develop signatures of multi-year temporal processing — directly relevant to CelVivo ClinoReactor's long-term stable organoid culture value proposition; cross-walked under `49373812` "Scientists Have Built Miniature Brains That Experience the Passage of Time" (2 pts top, by `geox`, https://www.sciencealert.com/unprecedented-scientists-have-built-miniature-brains-that-experience-the-passage-of-time — Science Alert user-press write-up of the same Nature s41586-026-10877-x paper); **second neural-organoid HN signal in 9 pulls** (after the 2026-07-27 Nature biocomputing article `49071596` and the 2026-08-12 Wired `49266068`), qualifying for Last-seen refresh by the recurrence criterion alone; **2026-08-23/24 git-repo-1 LDR burst (FIRST burst)** adds 5 root-level single-shot entries that **strengthen the class-organoid-3d-bioprinting evidence footprint**: (a) **CelVivo App Note 2026 shear stress ClinoStar vs orbital shaker** — CelVivo-direct competitive-killer document (HepG2/C3A 15d + embedded Caco-2 + brain organoid); (b) **Aiello & Bagni 2025 biorxiv Rotating Chamber brain organoid CFD** — first CFD-quantified RC shear-stress study (< 20 mPa, CelVivo-adjacent); (c) **Ajongbolo 2025 Cells brain organoid + assembloid review** — canonical brain-organoid review (CelVivo ClinoStar-adjacent + 3Brain HD-MEA-adjacent), first comprehensive brain-organoid review since the 2026-07-29 Organoids 2026 review; (d) **Kim 2025 Nat Commun EGaIn liquid-metal 3D MEA** — 3rd next-gen HD-MEA approach alongside Liu 2026 + 3Brain Accura-3D (3Brain-adjacent competitor); (e) **Tian 2025 Nat Commun hiPSC epicardium mTOR maturation** — cardiac-epicardium application-domain expansion (no vendor caLine truncated
| `china-cde-cell-gene-therapy-rules-2026` | China CDE (under NMPA) published technical guidelines defining scope & classification of cell and gene therapy drugs; standardizes CMC planning for Chinese pharma/CDMO/biotech customers | 2026-07-24 | 2026-07-24 | source-backed | web-search | 1 | watchlist | [Tavily: cisema.com 2026-07-24](/sources/web-search.md) |
| `china-order-no-818-clinical-translation` | China's Order No. 818 (effective 2026-05-01) creates an accelerated pathway for advanced biomedical technologies — including cell therapy and 3D bioprinting — towards regulated clinical translation at qualified hospitals after demonstrating safety and preliminary efficacy; the clinical-translation counterpart to the CDE classification item and directly relevant to Robin's Chinese pharma R&D / CDMO / biotech customer base | 2026-07-28 | 2026-07-28 | source-backed | web-search | 1 (+ Tavily synthesis) | watchlist | [Tavily: BetaLife LinkedIn 2026-07 + Roots Analysis re-mention 2026-07-28](/sources/web-search.md) |
| `MiniMax-m3` | MiniMax-M3 (1M context multimodal) HuggingFace model card + Twitter launch; the daily-driver inference provider behind every OpenWiki run and most of Robin's agent work; haimaker.ai July 2026 third-party eval ranks models for Hermes Agent usage; MyClaw.ai 2026-07-29 confirms M3 + M2.7 are the operational models for both OpenClaw and Hermes, with M3 supporting multimodal (image, video, music, speech, web search); pull 11 (2026-08-03) adds **unsloth/MiniMax-M3-GGUF** (HuggingFace 2026-08-01) confirming quantized local-LLM run path + **benchlm.ai "DeepSeek V4 Flash vs MiniMax M3: Benchmarks & Cost"** (2026-08-01) reframing M3 as "1M context window at $0.30…"; this 2026-08-03 HN pull surfaces the **MiniMax-H3 launch cluster** (item `49155629` 167pts top-feed ComfyUI Day-0 support with open weights + native audio + 2K video; item `49150583` 8pts "MiniMax-H3 weights are up" on HuggingFace model card; item `49150861` 2pts "Run MiniMax-H3 Locally with SGLang Diffusion on 2× RTX 5090s or 1× RTX Pro 6000" via LMSYS Twitter) — three distinct primary sources on the same day confirming H3 as the next frontier model release after M3; **2026-09-01 HN pull** adds the **12th entry to the open-weight-LLM cluster** — `49524447` "Show HN: Running 104GB Qwen3.8-Flash-Next on 48GB Mac with at ~12 tok/s" (36 pts top + 34 cmts, by `carloslfu` 2026-09-01, https://github.com/carloslfu/slotstream — Show HN local-LLM deployment of Qwen3.8-Flash-Next on a 48GB Mac via the slotstream project); the open-weight-LLM cluster now totals **~3,354+ pts across 12 items in 10 pulls over 13 days** — the strongest sustained engagement cluster of the entire 2026-08-07 streak — joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts + **2026-09-01 Qwen3.8-Flash-Next on 48GB Mac 36 pts**; the cluster corroborates the `MiniMax-m3` row's open-weight comparison anchor + the unsloth/MiniMax-M3-GGUF local-LLM run path; Last seen stays at 2026-08-03 because the 2026-09-01 pull does not surface any MiniMax-M3 or MiniMax-H3 release | 2026-07-16 | 2026-08-03 | source-backed | hackernews, web-search | 9+ | active | [HN: M3 model cluster + H3 launch cluster 2026-08-03](/sources/hackernews.md); [HN: Qwen3.8-Flash-Next on 48GB Mac 2026-09-01 — 12th open-weight-LLM cluster entry, ~3,354+ pts across 12 items in 10 pulls over 13 days](/sources/hackernews.md#latest-update--2026-09-01-1800-utc); [Tavily: Hermes Agent best-models eval](/sources/web-search.md); [Tavily: MyClaw OpenClaw vs MiniMax Agent 2026-07-29](/sources/web-search.md#2026-07-29-1803-pull); [Tavily: unsloth/MiniMax-M3-GGUF + BenchLM M3 vs DeepSeek V4 Flash 2026-08-03](/sources/web-search.md#2026-08-03-1808-pull) |
| `MiniMax-m3` | MiniMax-M3 (1M context multimodal) HuggingFace model card + Twitter launch; the daily-driver inference provider behind every OpenWiki run and most of Robin's agent work; haimaker.ai July 2026 third-party eval ranks models for Hermes Agent usage; MyClaw.ai 2026-07-29 confirms M3 + M2.7 are the operational models for both OpenClaw and Hermes, with M3 supporting multimodal (image, video, music, speech, web search); pull 11 (2026-08-03) adds **unsloth/MiniMax-M3-GGUF** (HuggingFace 2026-08-01) confirming quantized local-LLM run path + **benchlm.ai "DeepSeek V4 Flash vs MiniMax M3: Benchmarks & Cost"** (2026-08-01) reframing M3 as "1M context window at $0.30…"; this 2026-08-03 HN pull surfaces the **MiniMax-H3 launch cluster** (item `49155629` 167pts top-feed ComfyUI Day-0 support with open weights + native audio + 2K video; item `49150583` 8pts "MiniMax-H3 weights are up" on HuggingFace model card; item `49150861` 2pts "Run MiniMax-H3 Locally with SGLang Diffusion on 2× RTX 5090s or 1× RTX Pro 6000" via LMSYS Twitter) — three distinct primary sources on the same day confirming H3 as the next frontier model release after M3; **2026-09-01 HN pull** adds the **12th entry to the open-weight-LLM cluster** — `49524447` "Show HN: Running 104GB Qwen3.8-Flash-Next on 48GB Mac with at ~12 tok/s" (36 pts top + 34 cmts, by `carloslfu` 2026-09-01, https://github.com/carloslfu/slotstream — Show HN local-LLM deployment of Qwen3.8-Flash-Next on a 48GB Mac via the slotstream project); **2026-09-02 HN pull** adds the **13th entry to the open-weight-LLM cluster** — `49529132` "My local model setup on an M4 Pro Mac Mini" (271 pts best + 172 cmts, by `raybb` 2026-09-02, https://lws.io/blog/my-local-model-setup/ — local-LLM setup essay on an Apple Silicon M4 Pro Mac Mini by the same `raybb` author who submitted the 2026-08-23 Qwen 3.8 27B reverse-engineering essay `49407507` 234 pts — direct cross-walk to the prior local-LLM cluster entries + the 2026-09-01 Qwen3.8-Flash-Next-on-Mac 12th entry + the unsloth/MiniMax-M3-GGUF local-LLM run path); the open-weight-LLM cluster now totals **~3,625+ pts across 13 items in 11 pulls over 14 days** — the strongest sustained engagement cluster of the entire 2026-08-07 streak — joining the 2026-08-21 DeepSeek V4 Flash vision 379 pts + 2026-08-19 Unsloth Dynamic 3.0 GGUFs 314 pts + 2026-08-23 GLM-5.3 vs Anthropic/OpenAI 141 pts + 2026-08-23 Qwen 3.8 27B reverse-engineering 234 pts + 2026-08-25 Qwen 3.8-Flash-Next "releasing tomorrow" 244 pts + 2026-08-26 GLM-5.3-Flash 530 pts + 2026-08-26 Qwen3.8-Flash-Next release 441 pts + 2026-08-26 Z.ai Ox Alpha 391 pts + 2026-08-27 Small Models Have Arrived 135 pts + 2026-08-28 GLM-5.3 is now open-weight 268 pts + 2026-08-30 Tencent Hy4 preview 364 pts + 2026-09-01 Qwen3.8-Flash-Next on 48GB Mac 36 pts + **2026-09-02 M4-Pro-Mac-Mini local-model-setup 271 pts**; the cluster corroborates the `MiniMax-m3` row's open-weight comparison anchor + the unsloth/MiniMax-M3-GGUF local-LLM run path; the **2026-09-02 pull also surfaces** the **highest-engagement top-feed item** `49537553` "Gemini 3.8 Flash and 3.8 Flash Cyber" (464 pts top + 268 cmts best, by `bratao` 2026-09-02, https://blog.google/innovation-and-ai/models-and-research/gemini-models/3-8-flash-and-3-8-flash-cyber/ — **highest-engagement Google AI model item of the 2026-08-07 streak to date**; **adjacent-not-promoted per scope** because Gemini is closed-weight and not on Robin's named daily-driver stack; the closed-weight comparison anchor on the `MiniMax-m3` row corroborates the 2026-08-28 `49468818` Gemini-3.5-Transcribe 343 pts entry) and the **highest-engagement best-feed cross-walk item** `49527396` "The ChatGPT/Codex app bundles a full copy of LibreOffice" (473 pts best + 227 cmts, by `timpera` 2026-09-01, https://simonwillison.net/2026/Sep/1/codex-libreoffice/ — Simon Willison's blog on the ChatGPT/Codex desktop app bundling LibreOffice; **adjacent-not-promoted per scope** because the issue is about the ChatGPT/Codex desktop app, not the Codex CLI terminal coding-agent Robin uses; the direct Codex CLI cross-walk to the `coding-agent-tooling` watchlist lane makes this the strongest named-stack-adjacent item of the pull by Codex CLI competitor-coding-agent framing); Last seen stays at 2026-08-03 because the 2026-09-02 pull does not surface any MiniMax-M3 or MiniMax-H3 release | 2026-07-16 | 2026-08-03 | source-backed | hackernews, web-search | 9+ | active | [HN: M3 model cluster + H3 launch cluster 2026-08-03](/sources/hackernews.md); [HN: Qwen3.8-Flash-Next on 48GB Mac 2026-09-01 — 12th open-weight-LLM cluster entry, ~3,354+ pts across 12 items in 10 pulls over 13 days](/sources/hackernews.md#update--2026-09-01-1800-utc); [HN: M4-Pro-Mac-Mini local-model-setup 2026-09-02 — 13th open-weight-LLM cluster entry, ~3,625+ pts across 13 items in 11 pulls over 14 days](/sources/hackernews.md#latest-update--2026-09-02-1800-utc); [Tavily: Hermes Agent best-models eLine truncated
| `hermes-agent-v0-19-quicksilver` | Hermes Agent v0.19 "Quicksilver" release (2026-07-25): first-token delay 4.3s → 0.9s, profile routing, live subagent, delivery ledger, 1Password/Bitwarden integration; relevant to Robin's daily-driver stack; MCP 2026-07-28 revision finalization (not backward-compatible) is a related protocol-layer signal; `configuration.md` (2026-07-26) documents the iteration-budget behavior change (April 2026: removed premature 70%/90% warnings, now single wrap-up at 500/500 with grace call) and `features/api-server.md` (2026-07-27) documents new `/v1/runs/{run_id}/stop` + `/approval` endpoints with MiniMax-M3 as the documented default model; pull 7 (2026-07-30) re-anchors `api-server.md` with a new per-profile `API_SERVER_KEY` breaking-change warning and a runs API for long-form sessions, and adds a third-party Hermes Atlas "State of Hermes Agent — July 2026" report; this 2026-08-03 HN pull surfaces **Hermes Agent v0.20.0** (item `49159200`, NousResearch GitHub releases tag `v2026.8.3`, 1pt on HN day-of — the next major version after v0.19 Quicksilver); pull 11 (2026-08-03) adds a **Hermes Agent 0.19.1 GitHub bug report** (NousResearch issues/77000, 2026-08-02, score 0.790, "gpt-5.6-luna + opencode-go") confirming patch-version activity on the v0.19.x track between the v0.19 Quicksilver release and the v0.20.0 release; Tavily answer text on the Hermes/M3 lane was partially fabricated ("release date of June 1, 2026") and should be ignored — the underlying GitHub issue URL is the credible signal | 2026-07-25 | 2026-08-03 | source-backed | hackernews, web-search | 10 | active | [Tavily: Hermes v0.19 Quicksilver + MCP revision 2026-07-27](/sources/web-search.md); [Tavily: hermes-agent configuration.md + api-server.md + MyClaw 2026-07-29](/sources/web-search.md#2026-07-29-1803-pull); [Tavily: api-server.md API_SERVER_KEY break + Hermes Atlas state report 2026-07-30](/sources/web-search.md#2026-07-30-1804-pull); [Tavily: Hermes Agent 0.19.1 GitHub bug report 2026-08-03](/sources/web-search.md#2026-08-03-1808-pull); [HN: Hermes Agent v0.20.0 release 2026-08-03](/sources/hackernews.md) |
| `openwiki-brand` | `langchain-ai/openwiki` (96 pts) — same product family as Robin's OpenWiki; high-engagement on HN | 2026-07-16 | 2026-07-16 | source-backed | hackernews | 1 (+ 2 adjacent wrappers) | watchlist | [HN: openwiki cluster](/sources/hackernews.md#openwiki-brand-signal) |
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| `agent-memory-architecture` | Shared agent-memory architecture using Karpathy's LLM Wiki + Google's Open Knowledge Format (OKF) + MCP — let "every Local AI share ONE permanent memory"; this 2026-07-29 Tavily pull adds four more corroborated sources (Hackernoon Moorcheh.ai "Agent Memory Has a Lock-In Problem. Open Formats Are How We Fix It." with diffability / reviewability / auditability framing; Towards Data Science "Usage-Reinforced Decay Engine for AI Agent Memory" using Ebbinghaus forgetting curve; The Register / MinIO AIStor Memory for long-running multi-step workflows; HPCwire Exabase M-1 BEAM benchmark numbers 76.9% / 75.0% / 68.0% at 100K/1M/10M tokens) on top of the prior HN + Tavily sources; the Hackernoon piece is the strongest OpenWiki-aligning source yet; pull 7 (2026-07-30) adds arXiv 2607.24759v1 "A Templated Substrate for Heterogeneous Collaborative" + rohitg00 LLM Wiki v2 (extending Karpathy's LLM Wiki pattern with lessons from building agentmemory) + Pi `@zosmaai/pi-llm-wiki` package + MinIO AIStor Memory (HPCwire 2026-07-29 + SiliconANGLE 2026-07-30); pull 11 (2026-08-03) adds **akitaonrails/ai-memory `docs/research-karpathy-llm-wiki.md`** (GitHub 2026-07-28, score 0.601) — a third-party research write-up of the Karpathy LLM Wiki pattern — bringing the cluster to 15+ distinct sources; **2026-08-13 HN pull** adds item `49286073` "Show HN: MCP Memory – Fast Agent Memory Using Google's OKF and SQLite FTS5" (46 pts, 22 cmts, github.com/fellowgeek/mcp-memory) — **the first HN item since the 2026-07-16 `langchain-ai/openwiki` brand signal to explicitly name Google's OKF frontmatter** (the same schema OpenWiki uses at `/index.md` frontmatter `okf_version: "0.1"` and across every concept page's per-page frontmatter), paired with an MCP-server delivery channel that touches the 2026-07-28 MCP-protocol revision watchlist already feeding [`hermes-agent-v0-19-quicksilver`](/sources/hackernews.md) Evidence cell — direct corroboration of the OKF+memory schema pattern rather than a new theme; **2026-08-31 HN pull** adds item `49511007` "Launch HN: Almanac (YC S26) – AI that knows your company" (21 pts top+best + 22 cmts, https://usealmanac.com/ — YC S26 launch) — **first shipped-product evidence of the wikis-as-agent-memory-substrate pattern** (every prior source on the row is either a substrate-pattern essay, an open-source library, a research write-up, or a benchmark; Almanac is the first YC S26 launch that operationalizes the pattern as a hosted product with personal + company wikis + cross-source connectors (Gmail, Calendar, Granola, PostHog) + pre-compiled knowledge layer + long-horizon task tracking + proactive background-worker agents — the same architectural pattern as OpenWiki's 7-connector cron pipeline + OKF frontmatter + `/commitments.md` long-horizon tracking + `~/.openwiki/wiki` local markdown substrate); surfaced via Algolia `organoid` + `3Brain` substring-noise duplicate (the word "brain" appears 4+ times in the launch text). Refresh anchor: 2026-08-13 → 2026-08-31; Evidence count 16+ → 17+; row confidence stays `source-backed` (the row was already corroborated by 16+ sources before the Almanac refresh; the new refresh adds shipped-product evidence without changing the row's structural framing) | 2026-07-26 | 2026-08-31 | source-backed | hackernews, web-search | 17+ | active | [HN: 49059959, 49059889, 49060215](/sources/hackernews.md); [HN: MCP Memory using Google's OKF 2026-08-13](/sources/hackernews.md#agent-memory-architecture-refreshed-this-run); [HN: Almanac (YC S26) – AI that knows your company 2026-08-31](/sources/hackernews.md#latest-update--2026-08-31-1800-utc); [Tavily: LLM Wiki + OKF cluster 2026-07-28](/sources/web-search.md); [Tavily: Moorcheh.ai + TDS + MinIO + Exabase cluster 2026-07-29](/sources/web-search.md#2026-07-29-1803-pull); [Tavily: arXiv 2607.24759v1 + LLM Wiki v2 + Pi pi-llm-wiki + MinIO AIStor 2026-07-30](/sources/web-search.md#2026-07-30-1804-pull); [Tavily: akitaonrails/ai-memory research write-up 2026-08-03](/sources/web-search.md#2026-08-03-1808-pull) |
| `agent-memory-architecture` | Shared agent-memory architecture using Karpathy's LLM Wiki + Google's Open Knowledge Format (OKF) + MCP — let "every Local AI share ONE permanent memory"; this 2026-07-29 Tavily pull adds four more corroborated sources (Hackernoon Moorcheh.ai "Agent Memory Has a Lock-In Problem. Open Formats Are How We Fix It." with diffability / reviewability / auditability framing; Towards Data Science "Usage-Reinforced Decay Engine for AI Agent Memory" using Ebbinghaus forgetting curve; The Register / MinIO AIStor Memory for long-running multi-step workflows; HPCwire Exabase M-1 BEAM benchmark numbers 76.9% / 75.0% / 68.0% at 100K/1M/10M tokens) on top of the prior HN + Tavily sources; the Hackernoon piece is the strongest OpenWiki-aligning source yet; pull 7 (2026-07-30) adds arXiv 2607.24759v1 "A Templated Substrate for Heterogeneous Collaborative" + rohitg00 LLM Wiki v2 (extending Karpathy's LLM Wiki pattern with lessons from building agentmemory) + Pi `@zosmaai/pi-llm-wiki` package + MinIO AIStor Memory (HPCwire 2026-07-29 + SiliconANGLE 2026-07-30); pull 11 (2026-08-03) adds **akitaonrails/ai-memory `docs/research-karpathy-llm-wiki.md`** (GitHub 2026-07-28, score 0.601) — a third-party research write-up of the Karpathy LLM Wiki pattern — bringing the cluster to 15+ distinct sources; **2026-08-13 HN pull** adds item `49286073` "Show HN: MCP Memory – Fast Agent Memory Using Google's OKF and SQLite FTS5" (46 pts, 22 cmts, github.com/fellowgeek/mcp-memory) — **the first HN item since the 2026-07-16 `langchain-ai/openwiki` brand signal to explicitly name Google's OKF frontmatter** (the same schema OpenWiki uses at `/index.md` frontmatter `okf_version: "0.1"` and across every concept page's per-page frontmatter), paired with an MCP-server delivery channel that touches the 2026-07-28 MCP-protocol revision watchlist already feeding [`hermes-agent-v0-19-quicksilver`](/sources/hackernews.md) Evidence cell — direct corroboration of the OKF+memory schema pattern rather than a new theme; **2026-08-31 HN pull** adds item `49511007` "Launch HN: Almanac (YC S26) – AI that knows your company" (21 pts top+best + 22 cmts, https://usealmanac.com/ — YC S26 launch) — **first shipped-product evidence of the wikis-as-agent-memory-substrate pattern** (every prior source on the row is either a substrate-pattern essay, an open-source library, a research write-up, or a benchmark; Almanac is the first YC S26 launch that operationalizes the pattern as a hosted product with personal + company wikis + cross-source connectors (Gmail, Calendar, Granola, PostHog) + pre-compiled knowledge layer + long-horizon task tracking + proactive background-worker agents — the same architectural pattern as OpenWiki's 7-connector cron pipeline + OKF frontmatter + `/commitments.md` long-horizon tracking + `~/.openwiki/wiki` local markdown substrate); surfaced via Algolia `organoid` + `3Brain` substring-noise duplicate (the word "brain" appears 4+ times in the launch text). Refresh anchor: 2026-08-13 → 2026-08-31; Evidence count 16+ → 17+; row confidence stays `source-backed` (the row was already corroborated by 16+ sources before the Almanac refresh; the new refresh adds shipped-product evidence without changing the row's structural framing); **2026-09-02 HN pull** does not surface any new OKF / MCP Memory / Karpathy LLM Wiki / Almanac-like canonical artifact — `49528310` Compilr.dev Studio "A project brain AI agents write to and people read" (2 pts + 1 cmt, surfaced via Algolia `3Brain` substring-noise duplicate) is adjacent-not-promoted per scope because engagement is well below the 21-pt Almanac refresh trigger + it is a specific agent product rather than a substrate-pattern artifact; the row stays at Last seen 2026-08-31 | 2026-07-26 | 2026-08-31 | source-backed | hackernews, web-search | 17+ | active | [HN: 49059959, 49059889, 49060215](/sources/hackernews.md); [HN: MCP Memory using Google's OKF 2026-08-13](/sources/hackernews.md#agent-memory-architecture-refreshed-this-run); [HN: Almanac (YC S26) – AI that knows your company 2026-08-31](/sources/hackernews.md#update--2026-08-31-1800-utc); [Tavily: LLM Wiki + OKF cluster 2026-07-28](/sources/web-search.md); [Tavily: Moorcheh.ai + TDS + MinIO + Exabase cluster 2026-07-29](/sources/web-search.md#2026-07-29-1803-pull); [Tavily: arXiv 2607.24759v1 + LLM Wiki v2 + Pi pi-llm-wiki + MinIO AIStor 2026-07-30](/sources/web-search.md#2026-07-30-1804-pull); [Tavily: akitaonrails/ai-memory research write-up 2026-08-03](/sources/web-search.md#2026-08-03-1808-pull) |
## Notes
themes/05-robin-research.md
+13 -13
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@@ -1,9 +1,9 @@
---
type: "Reference"
title: "Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)"
description: "Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting). The 2026-08-23/24 fetch surfaced the largest single-day LDR burst since 2026-07-29 — 5 papers committed to main + new `deepread_40240593/` pipeline workspace directory. The 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 fetches observed vault HEAD unchanged at `9d4767c7` (vault silent for the 1st + 2nd + 3rd + 4th + 5th consecutive fetches since the 2026-08-24/25 SECOND 5-paper LDR burst, 5 calendar days stale). The 2026-08-31 fetch observed vault HEAD bumped `9d4767c7` → `391e4713` — **THIRD consecutive single-day 5-paper LDR burst** (Stewart + Aiello + Nguyen + Miao + Yan, all CelVivo-anchored, all in the NEW `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` capital-V subfolder — Robin's first parallel-naming deep-read subfolder convention), ending the 5-day vault silence; combined with the 2026-08-23/24 + 2026-08-24/25 clusters, **15 LDR files in 8 calendar days = the largest sustained 8-day research output** in Robin's vault activity log. The 4 carry-forward untracked directories (Review + templates + celvivo_commercial + deepread_40240593) bump their carry-forward counts to 20/15/15/8 days — the `Review/` + `templates/` + `celvivo_commercial/` entries are **confirmed one-off** at the 2026-08-28 fetch (carrying forward unchanged at 2026-08-29 + 2026-08-30 + 2026-08-31) and all 3 entries should be demoted to stale / not recurring carry-forward notes on the next synthesis pass."
tags: [theme, research, vault, deep-read, sales, crm, life-sciences, 2026-08-31, 2026-08-30, 2026-08-29, 2026-08-28, 2026-08-27, 2026-08-26, 2026-08-25, 2026-08-24, 2026-08-23, 2026-08-22, 2026-08-21, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13, celvivo-app-note-2026, aiello-bagni-rc-cfd, tian-epicardium-mtor, kim-egain-3d-mea, ajongbolo-brain-organoid-review, tevonian-2026-vascularized-liver-mps, yang-2026-cardiac-organoid-review, shen-2026-vascularized-organoids-review, zhai-2026-3d-skin-pemphigus, yan-2024-tmem106b-sars-cov2-brain-organoid, stewart-2023-ba5-xbb-neurotropic-brain-organoid, nguyen-2024-jev-g4-australia-brain-organoid, aiello-2025-brain-organoid-reproducibility, miao-2025-vascularized-lung-gut-organoids, brain-organoid-virology-cluster, celvivo-clinoreactor-cluster, vascularized-organoids, cardiac-organoids, skin-organoids, celvivo-capital-v-parallel-subfolder, vault-silence-ended, third-5paper-cluster, seventeenth-sources-sync, review-templates-celvivo-commercial-confirmed-one-off, deepread-40240593-seven-silent-fetches]
timestamp: 2026-08-30T18:06:00Z
description: "Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting). The 2026-08-23/24 fetch surfaced the largest single-day LDR burst since 2026-07-29 — 5 papers committed to main + new `deepread_40240593/` pipeline workspace directory. The 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 fetches observed vault HEAD unchanged at `9d4767c7` (vault silent for the 1st + 2nd + 3rd + 4th + 5th consecutive fetches since the 2026-08-24/25 SECOND 5-paper LDR burst, 5 calendar days stale). The 2026-08-31 fetch observed vault HEAD bumped `9d4767c7` → `391e4713` — **THIRD consecutive single-day 5-paper LDR burst** (Stewart + Aiello + Nguyen + Miao + Yan, all CelVivo-anchored, all in the NEW `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` capital-V subfolder — Robin's first parallel-naming deep-read subfolder convention), ending the 5-day vault silence; combined with the 2026-08-23/24 + 2026-08-24/25 clusters, **15 LDR files in 8 calendar days = the largest sustained 8-day research output** in Robin's vault activity log. The 2026-09-01 + 2026-09-02 fetches observed vault HEAD unchanged at `391e4713` (vault silent for the 1st + 2nd consecutive fetches since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR burst, 2 calendar days stale). The 4 carry-forward untracked directories (Review + templates + celvivo_commercial + deepread_40240593) bump their carry-forward counts to 22/17/17/10 days — the `Review/` + `templates/` + `celvivo_commercial/` entries remain **confirmed one-off** (carrying forward unchanged since the 2026-08-28 fetch) and continue as stale / not recurring carry-forward notes."
tags: [theme, research, vault, deep-read, sales, crm, life-sciences, 2026-09-02, 2026-09-01, 2026-08-31, 2026-08-30, 2026-08-29, 2026-08-28, 2026-08-27, 2026-08-26, 2026-08-25, 2026-08-24, 2026-08-23, 2026-08-22, 2026-08-21, 2026-08-20, 2026-08-19, 2026-08-18, 2026-08-17, 2026-08-15, 2026-08-13, celvivo-app-note-2026, aiello-bagni-rc-cfd, tian-epicardium-mtor, kim-egain-3d-mea, ajongbolo-brain-organoid-review, tevonian-2026-vascularized-liver-mps, yang-2026-cardiac-organoid-review, shen-2026-vascularized-organoids-review, zhai-2026-3d-skin-pemphigus, yan-2024-tmem106b-sars-cov2-brain-organoid, stewart-2023-ba5-xbb-neurotropic-brain-organoid, nguyen-2024-jev-g4-australia-brain-organoid, aiello-2025-brain-organoid-reproducibility, miao-2025-vascularized-lung-gut-organoids, brain-organoid-virology-cluster, celvivo-clinoreactor-cluster, vascularized-organoids, cardiac-organoids, skin-organoids, celvivo-capital-v-parallel-subfolder, vault-silence-2d, third-5paper-cluster, nineteenth-sources-sync, review-templates-celvivo-commercial-confirmed-one-off, deepread-40240593-ten-silent-fetches]
timestamp: 2026-09-02T18:16:00Z
---
# Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)
@@ -51,19 +51,19 @@ The diagram shows Robin's research substrate: a single Obsidian vault with 8 buc
## Knowledge substrate: Obsidian vault
Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-31T18:09:00Z):
Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-09-02T18:16:00Z):
| Field | Value |
| --- | --- |
| Repo path | `/home/ldw/workspace` |
| Branch | `main` |
| HEAD | `391e47131679ce9edf0f525236e78ebb13e0d232` (vault HEAD bumped from `9d4767c7` at the 2026-08-30T18:06Z fetch — **5 new vault commits** at the 2026-08-31T18:09Z fetch, ending the **5-calendar-day vault silence streak** since the 2026-08-24/25 SECOND 5-paper burst; **THIRD consecutive single-day 5-paper LDR burst** at 2026-08-31, all CelVivo-anchored; combined with the 2026-08-23/24 + 2026-08-24/25 clusters, **15 LDR files in 8 calendar days** = the largest sustained 8-day research output in Robin's vault activity log; all 3 clusters are CelVivo-anchored) |
| Ahead of origin/main | 35 commits new since 2026-08-03 fetch (+5 from the prior 30-commit baseline at the 2026-08-30T18:06Z fetch; +5 total since 2026-08-03) |
| HEAD | `391e47131679ce9edf0f525236e78ebb13e0d232` (vault HEAD unchanged at the 2026-08-31T18:09Z fetch — **0 new vault commits** at the 2026-09-01T18:07Z + **2026-09-02T18:16Z** fetches, **2 calendar days of vault silence** since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster; the 2026-08-31 cluster remains the most recent committed vault activity) |
| Ahead of origin/main | 35 commits new since 2026-08-03 fetch (unchanged — 0 new commits at the 2026-09-01 + 2026-09-02 fetches) |
| Auth | local path only — no remote, no credentials |
| Working-tree state | dirty (28 untracked files + 4 untracked directories — `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` + `deepread_40240593/` (7 subdirs, **8-day carry-forward** at 2026-08-31, was 7-day at 2026-08-30, **7 consecutive silent fetches** since the 2026-08-24/25 burst — working-folder pipeline hypothesis continuing to weaken; the 2026-08-31 burst did NOT route through `deepread_<slug>/` working folders, the directory mtime is still 2026-08-24 16:31 +0800 — **8 fetches silent on directory mtime**) + `Review/zhou2023_computer_vision_microfluidics.md` (**20-day carry-forward** at the 2026-08-31T18:09Z fetch, **18 fetches silent**, **one-off interpretation confirmed at 2026-08-28 fetch** per the 2026-08-27 fetch confirmation, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 fetches; the `celvivo_commercial/` + `templates/` entries are also **confirmed one-off alongside the `Review/` entry** at the 2026-08-28 fetch, both at **15-day carry-forward** + **14 fetches silent** at the 2026-08-31 fetch; all 3 entries should be **demoted to "stale / not recurring" carry-forward notes** on the next synthesis pass)) |
| Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-31T18-09-??-???Z/manifest.json` |
| **Latest cluster (2026-08-31, replacing the 2026-08-24/25 cluster)** | **THIRD consecutive single-day 5-paper LDR burst** (`eb24ab72` Stewart 2023 Front Microbiol SARS-CoV-2 omicron BA.5/XBB neurotropic brain organoids → `030f31ed` Aiello 2025 EMBO reports reproducible brain organoids (CelVivo ApS co-author affiliation) → `fad7e21e` Nguyen 2024 npj Viruses JEV G4 2022 Australia brain organoids → `4fca0123` Miao 2025 Cell vascularized lung/gut organoids → `391e4713` Yan 2024 Cell Reports TMEM106B SARS-CoV-2 ACE2-independent brain organoids) — **all 5 files landed in the NEW `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` subfolder (capital-V, parallel to the existing lowercase `04-Literature/Deep-Reads/Celvivo/` 142-file subfolder)**; Robin's **first parallel-naming deep-read subfolder convention**; subfolder semantics: QIMR Berghofer Suhrbier/Rawle viral-neurotropism brain-organoid line (Stewart + Nguyen + Yan) + CelVivo ApS co-authored reproducibility (Aiello) + vascularized lung/gut (Miao); 4 of 5 are brain organoids + 1 is vascularized lung/gut (Miao companion to the 2026-08-08 Miao 2025 v2 deep-read); the cluster did NOT receive the `9aa2af4c` vendor-mapping retrofit commit (no companion retrofit commit this cluster); **net-new external evidence** in this run; subfolder taxonomy from ~22 → ~23 in 8 calendar days. Combined with the 2026-08-23/24 + 2026-08-24/25 bursts = **15 LDR files in 8 calendar days** |
| **Latest uncommitted artifacts (2026-08-13 → 2026-08-31, multi-file, unchanged across the 2026-08-26 → 2026-08-31 fetches)** | `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` (carry-forward untracked from 2026-08-13, now at **20-day carry-forward** at the 2026-08-31 fetch — file mtime `2026-08-11 16:31:54 +0800` so mtime-based carry-forward is 20 days; first-observation-date-based carry-forward is 18 days; **structural signal confirmed as one-off** per `/sources/git-repo.md` Notable-entity entry — 18 consecutive fetches silent on the file; the entry should be demoted to a stale / not recurring carry-forward note on the next synthesis pass) + **2 prior untracked directories added at the 2026-08-17 fetch**, still-uncommitted at the 2026-08-31 fetch (**15-day carry-forward** each — was 14-day at the 2026-08-30 fetch, 13-day at the 2026-08-29 fetch, 12-day at the 2026-08-28 fetch, 11-day at the 2026-08-27 fetch, 10-day at the 2026-08-26 fetch): `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder; **confirmed one-off at 2026-08-28 fetch** carrying forward unchanged at 2026-08-29 + 2026-08-30 + 2026-08-31) + `templates/类器官IRB申请清单.md` (180-line IRB application checklist derived from Guo 2026; Robin's first customer-facing template produced from a single deep-read — see the new Templates subtree below; **confirmed one-off at 2026-08-28 fetch** carrying forward unchanged at 2026-08-29 + 2026-08-30 + 2026-08-31) + **1 new untracked directory added at the 2026-08-24 fetch** — `deepread_40240593/` (7 subdirs: 5 PMID-named `deepread_<PMID>/` + 2 slug-named `deepread_brain_organoid_fluid/` + `deepread_shear_stress_cs_os/` that exactly map to the Aiello + CelVivo App Note papers; the new directory is Robin's LDR pipeline intermediate-artifact workspace, see `/sources/git-repo.md` Notable-entity § "deepread_40240593/ pipeline workspace"; **8-day carry-forward** at 2026-08-31, directory mtime unchanged since 2026-08-24 16:31 +0800, the working-folder pipeline hypothesis continues to weaken — the absence of mtime movement across the 2026-08-25 + 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + **2026-08-31** fetches (7 consecutive silent fetches, plus the 2026-08-31 burst did NOT route through `deepread_<slug>/` working folders, **8 fetches silent on directory mtime**) suggests the pipeline may have been abandoned, formalized differently, or batched without intermediate commit) |
| Working-tree state | dirty (28 untracked files + 4 untracked directories — `celvivo_commercial/1331651_20260630_131201.pdf` + `templates/类器官IRB申请清单.md` + `deepread_40240593/` (7 subdirs, **10-day carry-forward** at 2026-09-02, was 9-day at 2026-09-01, **9 consecutive silent fetches** since the 2026-08-24/25 burst — working-folder pipeline hypothesis continuing to weaken; the 2026-08-31 burst did NOT route through `deepread_<slug>/` working folders, the directory mtime is still 2026-08-24 16:31 +0800 — **10 fetches silent on directory mtime**) + `Review/zhou2023_computer_vision_microfluidics.md` (**22-day carry-forward** at the 2026-09-02T18:16Z fetch, **20 fetches silent**, **one-off interpretation confirmed at 2026-08-28 fetch** per the 2026-08-27 fetch confirmation, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 fetches; the `celvivo_commercial/` + `templates/` entries are also **confirmed one-off alongside the `Review/` entry** at the 2026-08-28 fetch, both at **17-day carry-forward** + **16 fetches silent** at the 2026-09-02 fetch; all 3 entries remain **stale / not recurring carry-forward notes**)) |
| Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-09-02T18-16-44-603Z/manifest.json` |
| **Latest cluster (2026-08-31, carrying forward from the prior fetch)** | **THIRD consecutive single-day 5-paper LDR burst** (`eb24ab72` Stewart 2023 Front Microbiol SARS-CoV-2 omicron BA.5/XBB neurotropic brain organoids → `030f31ed` Aiello 2025 EMBO reports reproducible brain organoids (CelVivo ApS co-author affiliation) → `fad7e21e` Nguyen 2024 npj Viruses JEV G4 2022 Australia brain organoids → `4fca0123` Miao 2025 Cell vascularized lung/gut organoids → `391e4713` Yan 2024 Cell Reports TMEM106B SARS-CoV-2 ACE2-independent brain organoids) — **all 5 files landed in the NEW `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` subfolder (capital-V, parallel to the existing lowercase `04-Literature/Deep-Reads/Celvivo/` 142-file subfolder)**; Robin's **first parallel-naming deep-read subfolder convention**; subfolder semantics: QIMR Berghofer Suhrbier/Rawle viral-neurotropism brain-organoid line (Stewart + Nguyen + Yan) + CelVivo ApS co-authored reproducibility (Aiello) + vascularized lung/gut (Miao); 4 of 5 are brain organoids + 1 is vascularized lung/gut (Miao companion to the 2026-08-08 Miao 2025 v2 deep-read); the cluster did NOT receive the `9aa2af4c` vendor-mapping retrofit commit (no companion retrofit commit this cluster); **net-new external evidence** carried forward from the 2026-08-31T18:09Z fetch. Combined with the 2026-08-23/24 + 2026-08-24/25 bursts = **15 LDR files in 8 calendar days** |
| **Latest uncommitted artifacts (2026-08-13 → 2026-09-02, multi-file, unchanged across the 2026-08-26 → 2026-09-02 fetches)** | `04-Literature/Deep-Reads/Review/zhou2023_computer_vision_microfluidics.md` (carry-forward untracked from 2026-08-13, now at **22-day carry-forward** at the 2026-09-02 fetch — file mtime `2026-08-11 16:31:54 +0800` so mtime-based carry-forward is 22 days; first-observation-date-based carry-forward is 20 days; **structural signal confirmed as one-off** per `/sources/git-repo.md` Notable-entity entry — 20 consecutive fetches silent on the file; the entry remains a stale / not recurring carry-forward note) + **2 prior untracked directories added at the 2026-08-17 fetch**, still-uncommitted at the 2026-09-02 fetch (**17-day carry-forward** each — was 16-day at the 2026-09-01 fetch, 15-day at the 2026-08-31 fetch, 14-day at the 2026-08-30 fetch, 13-day at the 2026-08-29 fetch, 12-day at the 2026-08-28 fetch, 11-day at the 2026-08-27 fetch, 10-day at the 2026-08-26 fetch): `celvivo_commercial/1331651_20260630_131201.pdf` (6-30 quote PDF migrated into new folder; **confirmed one-off at 2026-08-28 fetch** carrying forward unchanged at 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02) + `templates/类器官IRB申请清单.md` (180-line IRB application checklist derived from Guo 2026; Robin's first customer-facing template produced from a single deep-read — see the new Templates subtree below; **confirmed one-off at 2026-08-28 fetch** carrying forward unchanged at 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02) + **1 new untracked directory added at the 2026-08-24 fetch** — `deepread_40240593/` (7 subdirs: 5 PMID-named `deepread_<PMID>/` + 2 slug-named `deepread_brain_organoid_fluid/` + `deepread_shear_stress_cs_os/` that exactly map to the Aiello + CelVivo App Note papers; the new directory is Robin's LDR pipeline intermediate-artifact workspace, see `/sources/git-repo.md` Notable-entity § "deepread_40240593/ pipeline workspace"; **10-day carry-forward** at 2026-09-02, directory mtime unchanged since 2026-08-24 16:31 +0800, the working-folder pipeline hypothesis continues to weaken — the absence of mtime movement across the 2026-08-25 + 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + **2026-09-02** fetches (9 consecutive silent fetches, plus the 2026-08-31 burst did NOT route through `deepread_<slug>/` working folders, **10 fetches silent on directory mtime**) suggests the pipeline may have been abandoned, formalized differently, or batched without intermediate commit) |
### Vault navigation index (top-level folders)
@@ -115,9 +115,9 @@ Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08
| `Retinal/` | 1 | retinal organoid |
| `Microbioreactor/` | 1 | Rosero 2026 Front Bioeng Biotechnol (added 2026-08-07) |
| `Cells/` | 1 | Fernandez Vallone 2026 Cells THSDC (added 2026-08-08) |
| `Review/` | 1 | Zhou 2023 computer vision + microfluidics (added 2026-08-13, **untracked**, **10-day carry-forward** at 2026-08-21 fetch (was 9-day at 2026-08-20) — **8 fetches silent** — structural signal continuing to weaken; **11-day carry-forward** at 2026-08-22 fetch — **9 fetches silent**; **12-day carry-forward** at 2026-08-23 fetch — **10 fetches silent**; **13-day carry-forward** at 2026-08-24 fetch — **11 fetches silent**; **14-day carry-forward** at 2026-08-25 fetch — **12 fetches silent**; **15-day carry-forward** at 2026-08-26 fetch — **13 fetches silent**; **16-day carry-forward** at 2026-08-27 fetch — **14 fetches silent** — **confirmed one-off interpretation at 2026-08-27 fetch** per the parallel `Review/` downgrade in `/sources/git-repo.md`; **17-day carry-forward** at 2026-08-28 fetch — **15 fetches silent** — **demoted to "stale / not recurring" carry-forward note** at the 2026-08-28 fetch; **18-day carry-forward** at 2026-08-29 fetch — **16 fetches silent** — carries forward unchanged at the 2026-08-29 fetch, the 2026-08-28 demotion still standing; **19-day carry-forward** at 2026-08-30 fetch — **17 fetches silent** — carries forward unchanged at the 2026-08-30 fetch, the 2026-08-28 demotion still standing) |
| `Templates/` | 1 | `类器官IRB申请清单.md` v1.0 (2026-08-16, derived from Guo 2026 ethics deep-read, **untracked**; first customer-facing template produced from a single deep-read; **5-day carry-forward** at 2026-08-21 fetch — was 4-day at 2026-08-20; **6-day carry-forward** at 2026-08-22 fetch; **7-day carry-forward** at 2026-08-23 fetch; **8-day carry-forward** at 2026-08-24 fetch; **9-day carry-forward** at 2026-08-25 fetch; **10-day carry-forward** at 2026-08-26 fetch; **11-day carry-forward** at 2026-08-27 fetch — **approaching confirmed one-off interpretation alongside the `Review/` entry**; **12-day carry-forward** at 2026-08-28 fetch — **11 fetches silent** — **now confirmed one-off alongside the `Review/` + `CelVivo-commercial/` entries** at the 2026-08-28 fetch; **13-day carry-forward** at 2026-08-29 fetch — **12 fetches silent** — carries forward unchanged at the 2026-08-29 fetch, the 2026-08-28 confirmation still standing; **14-day carry-forward** at 2026-08-30 fetch — **13 fetches silent** — carries forward unchanged at the 2026-08-30 fetch, the 2026-08-28 confirmation still standing; entry should be demoted to a stale carry-forward note on the next synthesis pass) |
| `CelVivo-commercial/` | 1 | `1331651_20260630_131201.pdf` (2026-06-30 quote PDF migrated into new folder 2026-08-17, **untracked**; **5-day carry-forward** at 2026-08-21 fetch — was 4-day at 2026-08-20; **6-day carry-forward** at 2026-08-22 fetch; **7-day carry-forward** at 2026-08-23 fetch; **8-day carry-forward** at 2026-08-24 fetch; **9-day carry-forward** at 2026-08-25 fetch; **10-day carry-forward** at 2026-08-26 fetch; **11-day carry-forward** at 2026-08-27 fetch — **approaching confirmed one-off interpretation alongside the `Review/` + `Templates/` entries**; **12-day carry-forward** at 2026-08-28 fetch — **11 fetches silent** — **now confirmed one-off alongside the `Review/` + `Templates/` entries** at the 2026-08-28 fetch; **13-day carry-forward** at 2026-08-29 fetch — **12 fetches silent** — carries forward unchanged at the 2026-08-29 fetch, the 2026-08-28 confirmation still standing; **14-day carry-forward** at 2026-08-30 fetch — **13 fetches silent** — carries forward unchanged at the 2026-08-30 fetch, the 2026-08-28 confirmation still standing; entry should be demoted to a stale carry-forward note on the next synthesis pass) |
| `Review/` | 1 | Zhou 2023 computer vision + microfluidics (added 2026-08-13, **untracked**, **10-day carry-forward** at 2026-08-21 fetch (was 9-day at 2026-08-20) — **8 fetches silent** — structural signal continuing to weaken; **11-day carry-forward** at 2026-08-22 fetch — **9 fetches silent**; **12-day carry-forward** at 2026-08-23 fetch — **10 fetches silent**; **13-day carry-forward** at 2026-08-24 fetch — **11 fetches silent**; **14-day carry-forward** at 2026-08-25 fetch — **12 fetches silent**; **15-day carry-forward** at 2026-08-26 fetch — **13 fetches silent**; **16-day carry-forward** at 2026-08-27 fetch — **14 fetches silent** — **confirmed one-off interpretation at 2026-08-27 fetch** per the parallel `Review/` downgrade in `/sources/git-repo.md`; **17-day carry-forward** at 2026-08-28 fetch — **15 fetches silent** — **demoted to "stale / not recurring" carry-forward note** at the 2026-08-28 fetch; **18-day carry-forward** at 2026-08-29 fetch — **16 fetches silent** — carries forward unchanged at the 2026-08-29 fetch, the 2026-08-28 demotion still standing; **19-day carry-forward** at 2026-08-30 fetch — **17 fetches silent** — carries forward unchanged at the 2026-08-30 fetch, the 2026-08-28 demotion still standing; **20-day carry-forward** at 2026-08-31 fetch — **18 fetches silent** — carries forward unchanged at the 2026-08-31 fetch, the 2026-08-28 demotion still standing; **21-day carry-forward** at 2026-09-01 fetch — **19 fetches silent** — carries forward unchanged at the 2026-09-01 fetch, the 2026-08-28 demotion still standing; **22-day carry-forward** at 2026-09-02 fetch — **20 fetches silent** — carries forward unchanged at the 2026-09-02 fetch, the 2026-08-28 demotion still standing) |
| `Templates/` | 1 | `类器官IRB申请清单.md` v1.0 (2026-08-16, derived from Guo 2026 ethics deep-read, **untracked**; first customer-facing template produced from a single deep-read; **5-day carry-forward** at 2026-08-21 fetch — was 4-day at 2026-08-20; **6-day carry-forward** at 2026-08-22 fetch; **7-day carry-forward** at 2026-08-23 fetch; **8-day carry-forward** at 2026-08-24 fetch; **9-day carry-forward** at 2026-08-25 fetch; **10-day carry-forward** at 2026-08-26 fetch; **11-day carry-forward** at 2026-08-27 fetch — **approaching confirmed one-off interpretation alongside the `Review/` entry**; **12-day carry-forward** at 2026-08-28 fetch — **11 fetches silent** — **now confirmed one-off alongside the `Review/` + `CelVivo-commercial/` entries** at the 2026-08-28 fetch; **13-day carry-forward** at 2026-08-29 fetch — **12 fetches silent** — carries forward unchanged at the 2026-08-29 fetch, the 2026-08-28 confirmation still standing; **14-day carry-forward** at 2026-08-30 fetch — **13 fetches silent** — carries forward unchanged at the 2026-08-30 fetch, the 2026-08-28 confirmation still standing; **15-day carry-forward** at 2026-08-31 fetch — **14 fetches silent** — carries forward unchanged at the 2026-08-31 fetch, the 2026-08-28 confirmation still standing; **16-day carry-forward** at 2026-09-01 fetch — **15 fetches silent** — carries forward unchanged at the 2026-09-01 fetch, the 2026-08-28 confirmation still standing; **17-day carry-forward** at 2026-09-02 fetch — **16 fetches silent** — carries forward unchanged at the 2026-09-02 fetch, the 2026-08-28 confirmation still standing; entry is a stale carry-forward note) |
| `CelVivo-commercial/` | 1 | `1331651_20260630_131201.pdf` (2026-06-30 quote PDF migrated into new folder 2026-08-17, **untracked**; **5-day carry-forward** at 2026-08-21 fetch — was 4-day at 2026-08-20; **6-day carry-forward** at 2026-08-22 fetch; **7-day carry-forward** at 2026-08-23 fetch; **8-day carry-forward** at 2026-08-24 fetch; **9-day carry-forward** at 2026-08-25 fetch; **10-day carry-forward** at 2026-08-26 fetch; **11-day carry-forward** at 2026-08-27 fetch — **approaching confirmed one-off interpretation alongside the `Review/` + `Templates/` entries**; **12-day carry-forward** at 2026-08-28 fetch — **11 fetches silent** — **now confirmed one-off alongside the `Review/` + `Templates/` entries** at the 2026-08-28 fetch; **13-day carry-forward** at 2026-08-29 fetch — **12 fetches silent** — carries forward unchanged at the 2026-08-29 fetch, the 2026-08-28 confirmation still standing; **14-day carry-forward** at 2026-08-30 fetch — **13 fetches silent** — carries forward unchanged at the 2026-08-30 fetch, the 2026-08-28 confirmation still standing; **15-day carry-forward** at 2026-08-31 fetch — **14 fetches silent** — carries forward unchanged at the 2026-08-31 fetch, the 2026-08-28 confirmation still standing; **16-day carry-forward** at 2026-09-01 fetch — **15 fetches silent** — carries forward unchanged at the 2026-09-01 fetch, the 2026-08-28 confirmation still standing; **17-day carry-forward** at 2026-09-02 fetch — **16 fetches silent** — carries forward unchanged at the 2026-09-02 fetch, the 2026-08-28 confirmation still standing; entry is a stale carry-forward note) |
Total ≈ 1,211 deep-read notes on `main` (+5 new LDR files from the 2026-08-31 CelVivo-cluster on top of +4 from the 2026-08-24/25 cluster + +5 from the 2026-08-23/24 single-shot LDR burst + +2 from the 2026-08-16 Quintard 2024 + Guo 2026 clusters; the 5th 2026-08-25 commit `9aa2af4c` is an in-place `M` touch on Tevonian + Yang files, not a new file). The 4 vendor subfolders (Celvivo / 3Brain / Cellink / Organoid) cover the canonical product KB per the wiki goal focus areas. The new `templates/` folder signals Robin may be formalizing customer-facing deliverables (checklists / templates / sales scripts) as a separate vault subtree — the IRB application checklist is the first such artifact. The 2026-08-31 cluster creates the **NEW `CelVivo/` (capital-V) parallel subfolder** — Robin's first parallel-naming deep-read subfolder convention.
themes/index.md
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- [Theme 2 · 3D bioprinting (Cellink / BIONOVA)](02-bioprinting.md) - Synthesis page for Robin's 3D bioprinting theme — Cellink BIO X / BIONOVA X / Lumen X extrusion and DLP printing hardware for tissue engineering, drug tablets, and scaffold fabrication.
- [Theme 3 · AI Agent tools (Hermes / Codex / MiniMax code)](03-ai-agents.md) - Synthesis page for Robin's daily-driver AI agent stack — Hermes Agent on WSL, MiniMax code on the desktop, Codex CLI fallback, OpenWiki as cross-agent memory substrate, and supporting toolchain (RustDesk, Gitea, Wiki.js, RAGFlow).
- [Theme 4 · Local LLM deployment (Ollama / bge-reranker / RAGFlow)](04-local-llm.md) - Synthesis page for Robin's local-LLM fleet — Ollama serve + qwen2.5vl:7b vision model + BAAI/bge-m3 embeddings (Ollama + LM Studio) + bge-reranker rerank + RAGFlow KB retrieval + adjacent NAS subsystems (NocoDB / SeaFile / Wiki.js / Feishu mail).
- [Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)](05-robin-research.md) - Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting). The 2026-08-23/24 fetch surfaced the largest single-day LDR burst since 2026-07-29 — 5 papers committed to main + new `deepread_40240593/` pipeline workspace directory. The 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 fetches observed vault HEAD unchanged at `9d4767c7` (vault silent for the 1st + 2nd + 3rd + 4th + 5th consecutive fetches since the 2026-08-24/25 SECOND 5-paper LDR burst, 5 calendar days stale). The 2026-08-31 fetch observed vault HEAD bumped `9d4767c7` → `391e4713` — **THIRD consecutive single-day 5-paper LDR burst** (Stewart + Aiello + Nguyen + Miao + Yan, all CelVivo-anchored, all in the NEW `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` capital-V subfolder — Robin's first parallel-naming deep-read subfolder convention), ending the 5-day vault silence; combined with the 2026-08-23/24 + 2026-08-24/25 clusters, **15 LDR files in 8 calendar days = the largest sustained 8-day research output** in Robin's vault activity log. The 4 carry-forward untracked directories (Review + templates + celvivo_commercial + deepread_40240593) bump their carry-forward counts to 20/15/15/8 days — the `Review/` + `templates/` + `celvivo_commercial/` entries are **confirmed one-off** at the 2026-08-28 fetch (carrying forward unchanged at 2026-08-29 + 2026-08-30 + 2026-08-31) and all 3 entries should be demoted to stale / not recurring carry-forward notes on the next synthesis pass.
- [Theme 5 · Robin's personal research (vendor deep reads + sales ammunition + CRM)](05-robin-research.md) - Synthesis page for Robin's personal research portfolio — Obsidian vault + literature deep-read pipeline + sales ammunition + China distributor map + active CRM profiles + work-rhythm snapshots. Output routes into vendor themes 01 (organoid-equipment) and 02 (bioprinting). The 2026-08-23/24 fetch surfaced the largest single-day LDR burst since 2026-07-29 — 5 papers committed to main + new `deepread_40240593/` pipeline workspace directory. The 2026-08-26 + 2026-08-27 + 2026-08-28 + 2026-08-29 + 2026-08-30 fetches observed vault HEAD unchanged at `9d4767c7` (vault silent for the 1st + 2nd + 3rd + 4th + 5th consecutive fetches since the 2026-08-24/25 SECOND 5-paper LDR burst, 5 calendar days stale). The 2026-08-31 fetch observed vault HEAD bumped `9d4767c7` → `391e4713` — **THIRD consecutive single-day 5-paper LDR burst** (Stewart + Aiello + Nguyen + Miao + Yan, all CelVivo-anchored, all in the NEW `obsidian-vault/04-Literature/Deep-Reads/CelVivo/` capital-V subfolder — Robin's first parallel-naming deep-read subfolder convention), ending the 5-day vault silence; combined with the 2026-08-23/24 + 2026-08-24/25 clusters, **15 LDR files in 8 calendar days = the largest sustained 8-day research output** in Robin's vault activity log. The 2026-09-01 + 2026-09-02 fetches observed vault HEAD unchanged at `391e4713` (vault silent for the 1st + 2nd consecutive fetches since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR burst, 2 calendar days stale). The 4 carry-forward untracked directories (Review + templates + celvivo_commercial + deepread_40240593) bump their carry-forward counts to 22/17/17/10 days — the `Review/` + `templates/` + `celvivo_commercial/` entries remain **confirmed one-off** (carrying forward unchanged since the 2026-08-28 fetch) and continue as stale / not recurring carry-forward notes.