chore: daily update 2026-08-11
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{
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"updatedAt": "2026-08-08T18:33:44.986Z",
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"updatedAt": "2026-08-10T18:09:51.993Z",
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"command": "update",
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"model": "MiniMax-M3",
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"status": "complete",
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- **Wiki state:** initialized — Hacker News, the local Obsidian vault, and Tavily web search are active and feeding `/sources/hackernews.md`, `/sources/git-repo.md`, `/sources/web-search.md`, and `/themes.md`. All 5 synthesis themes (`/themes/01-organoid-equipment.md`, `/themes/02-bioprinting.md`, `/themes/03-ai-agents.md`, `/themes/04-local-llm.md`, `/themes/05-robin-research.md`) are now generated.
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- **Connectors:** Hacker News, git-repo, and web search active. The 2026-08-08 web-search update attempt was skipped because the connector is not enabled and `TAVILY_API_KEY` is empty; the latest successful Tavily pull remains 2026-08-03 18:08 UTC. Gmail, Slack, Notion, and X are not yet configured — see "Adding sources" below.
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- **Last update:** see [/.last-update.json](/.last-update.json) — this run is **git-repo-1 update (2026-08-08)** for the Obsidian vault + OpenWiki wiki. Vault HEAD bumped from `1a81e485` (2026-07-29) to `d7df3830` (2026-08-08); 9 new commits landed on `main` in the last 5 days, with 19 untracked files in the working tree (8 of which are the new `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + the new `_known_associations.md` association index). The 2026-08-07 distributor refresh (Hermes hook 4) replaces the 2026-07-24 baseline (261 dealers → 259 dealers: 华北 74 → 72) and identifies **济南成全生物科技有限公司 (曹沛起)** as the only CelVivo ClinoStar-listed agent in the 259-dealer list (cross-region: 华北 + 山东); the same hook also maps FemtoBiomed CellShot → 9X Bio (汇佰生物) → TriArm Therapeutics (翁靖傑, 128 万 Phase1 / 8-10 至 8-14 现场 demo), and finds 3Brain / Cellink / FemtoBiomed direct agents → 0 in the 259 baseline. Wiki edits this run: (a) `/sources/git-repo.md` — fully rewritten from the 2026-08-03 stale state to the 2026-08-08 fetch (vault HEAD `d7df3830`, 9 new commits, 19 untracked files, 4 vendor-paper deep-reads since 2026-08-03, 8 distributors-rebuild + association index); (b) `/sources/distributors-china-2026.md` — replaced 2026-07-24 baseline with 2026-08-07 baseline (259 dealers; full per-region Δ table; new `_known_associations.md` index table); (c) `/sources/literature.md` — added Rosero 2026 Microbioreactor + Fernandez Vallone 2026 Cells THSDC papers to the 30-day table; (d) `/themes/05-robin-research.md` — vault HEAD updated to `d7df3830`; CRM section updated to reflect 2026-08-07 `_known_associations.md` partial resolution for 董慧群 → 济南成全; distributor map section updated with 8-07 baseline numbers + 4-vendor break-out partial resolution; 30-day research output table extended with 2026-08-06 Parfitt (DJ1 LOF midbrain organoid PD) + 2026-08-08 Rosero (Microbioreactor Mini Review) + 2026-08-08 Fernandez Vallone (Cells THSDC); (e) `/open-questions.md` — updated `agent-dong-huiqun-celvivo` with 2026-08-07 partial resolution (济南成全 candidate); added 2 new questions: `chengdu-baile-vs-lidesai-for-ou-xianhong` (成都 dealer 2选1 for 西南医大殴贤红), `distributors-3brain-cellink-zero-coverage` (259 dealer list shows 0 三Brain / 0 Cellink / 0 FemtoBiomed direct agents — channel gap or xlsx gap?); (f) `/commitments.md` — added 2 new commitments: `dong-huiqun-ji-nan-chengquan-link` (confirm 董慧群 ↔ 济南成全 link), `distributors-2026-08-07-refresh` (落地 2026-08-07 distributor baseline to wiki + 跨工具). Prior run was **web-search-1 update attempt (2026-08-08)** — **skipped** because the connector is not enabled and `TAVILY_API_KEY` is empty; no raw Tavily evidence was written and no CelVivo / 3Brain / Cellink findings were added to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt. Wiki edits in that prior run were limited to: (a) `/sources/web-search.md` — added a "2026-08-08 attempted update — skipped" section recording the connector status + the missing API key + the absence of new 24-hour evidence; replaced the `openwiki_generated` placeholder front matter with explicit `type` / `title` / `description` / `tags`; (b) `/sources/README.md` — moved Web Search from "not configured" to "active" with the latest-successful-pull and skip note; refreshed the connector roll table with the same status; replaced placeholder front matter; (c) `/themes.md` — replaced placeholder front matter; repaired six broken internal-link markers in the theme table (the heading anchors `2026-07-27-1804-pull`, `2026-08-08`, `china-cde-cell-gene-therapy-classification-source-backed`, `MiniMax-m3-watchlist`, `hermes-agent-best-models-eval-source-backed-workflow-tooling-low-priority`, `MiniMax-h3-launch-cluster-refreshed-this-run` did not match the current headings in the source pages); no theme rows were added or promoted (no new Tavily evidence); (d) `/quickstart.md` (prior run) — added a "Latest update — web-search-1 attempted 2026-08-08 skipped" paragraph ahead of the existing hackernews / literature / web-search prior-run history; updated the wiki state note to mention the 2026-08-08 skip; updated the Web Search connector row in "Adding sources" with the missing-API-key caveat. Prior successful source run was **hackernews-1** (`2026-08-08T18:00:44Z`) — third consecutive "no promotable hits" pull under the simplified 6-query LLM-agent topic set (after 2026-08-07 12:29 and 2026-08-08 03:15 UTC); 2 feeds (`top`, `best`) → 23 unique items; all 6 queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`) returned `nbHits=null` / 0 hits. Zero vendor-anchored life-science items, zero positive `openwiki` hits, three flag-for-traceability items (`49214468` Managing AI Coding Costs at Scale 290 pts best databrickLine truncated
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- **Last update:** see [/.last-update.json](/.last-update.json) — this run is **git-repo-1 update (2026-08-10T18:06Z)** for the Obsidian vault + OpenWiki wiki per the source-specific instruction "Track vault + OpenWiki wiki mtime + commits (Robin 8-07 added)". Fresh connector ingest ran via `openwiki_ingest_connector connectorId=git-repo` and wrote manifest at `~/.openwiki/connectors/git-repo/raw/2026-08-10T18-06-18-966Z/manifest.json`. **Vault HEAD** bumped from `d7df3830` (2026-08-08) to **`d97b39edb328b7e15d28de4a54a6d0bc2dd51274`** (2026-08-10T14:03Z); 3 new commits landed in the 24-hour window — all frontmatter-hygiene + MOC-discipline, no new external evidence: (a) **`6b717aef`** MOC 方案 1 样品 — **first MOC** created at `04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md` (95 lines, 沙牛《AI 时代的 Obsidian 公开课》课时 1 pattern; `type: moc`; `related:` already names `[[MOC-3Brain-HD-MEA]]` as next planned MOC plus `[[02-Clients/Agents/_known_associations]]` + `[[02-Active-Deals/CellShot-TriArm-Demo-计划-v2-老师版-2026-07-20]]`); 7 existing deep-reads got `related:` back-link frontmatter; (b) **`3b929c2f`** wang2024 方案 2 样品 — `wang2024-org-on-chip.md` got 6-field frontmatter (doi/journal/year/volume/pages/authors/pmid) + 7 image alt descriptions; (c) **`d97b39ed`** Phase A 批量 — 6 deep-reads received the 6-field frontmatter: Organoids 2026 review (Exp Hematol Oncol, PMID 41545895), CelVivo PAH Metabolomics (bioRxiv), Shin 2024 thalamocortical organoids 22q11ds (3Brain folder), Fernandez Vallone 2026 Cells THSDC, Liu 2026 NBME shape-conformal organoid, 类器官综述_CMOS_HD_MEA_类器官电生理_2026-06-05. **Wiki HEAD** stayed at **`2bc03f3ddb54e44d53dfed9366daeee109b82e87`** (2026-08-09T18:30Z, the sources-sync refresh recorded in the prior 2026-08-10 update — no new wiki-side commits landed in the window). Wiki edits this run: (a) `/sources/git-repo.md` — refreshed frontmatter HEAD pointers + added the 3 new commits to the recent-commits table + added a "Phase A metadata batch + first MOC (2026-08-10)" Notable-entity entry + added a "Process signal worth watching" pointer in the synthesis-policy section; (b) `/themes/05-robin-research.md` — vault HEAD `d97b39ed` (12 commits since 2026-08-03) + added a new top-row entry to the 30-day research-output table for "Phase A metadata batch + first MOC" + extended the by-vendor table with a "(Process discipline)" row + added 2 backlog items: "MOC pattern extension (2026-08-10 onward)" and "Phase A frontmatter batch rollout (2026-08-10 onward)"; (c) `/themes/05-robin-research.md` Mermaid ER diagram — added the `MOC` entity to the vault children. **No theme-row promotion, no commitment row, no open-question row, no personal-logistics item** — the new commits are process discipline, not new external evidence, and the prior 2026-08-08 update already captured the substantive distributor / CRM / Liu-2026-roadmap signal. Prior run was **hackernews-1 update (2026-08-10)** for the LLM-agent topic set per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories". 2 feeds (`top` 27 + `best` 9) → **31 unique items** (5 overlap: `49241679` Muse Glimmer, `49244569` Kinney Drugs AI phone-assistant, `49245023` Mars Bar 1991, `49245359` Cognitive Commons, `49246057` Stoa Markets GPU marketplace). 6 search queries (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`) returned **zero vendor-anchored hits** — all `organoid`/`3Brain`/`Cellink` hits are string-collision noise (e.g. `49245612` PicPocket "organize", `49243294` "brainbaking.com", `49246057` Stoa Markets GPU marketplace substring-hit on "Cellink"); `openwiki` + `deepagents` returned `nbHits=0`; `CelVivo` returned `nbHits=0`. The "no material HN footprint for the 4 vendor lines" finding still holds; Tavily (web-search) remains the productive lane for vendor news. Five high-engagement AI-agent / inference items are flagged for traceability but stay adjacent-not-promoted under the existing scope discipline ("open-weight AI never earns a `themes.md` row" + workflow-tooling priority LOW): **`49241679` Muse Glimmer** (759 pts, 420 cmts — Meta research blog, 30B open-weights model "optimized for always-on local agent workflows", highest engagement of the pull) + **`49241749` Muse Glimmer developer-portal variant** (9 pts, 2 cmts, same Meta release); **`49239751` Docker Sandboxes** (517 pts, 312 cmts — disposable isolated sandboxes for AI agents); **`49239021` Auto mode now default in Claude Code** (268 pts, 286 cmts — Anthropic product update; Claude Code is on Robin's stack but the established scope rule keeps wrapper/TUI changes adjacent-not-promoted); **`49245437` Ante offline coding agent** (66 pts, 39 cmts — Rust single-binary offline agent). **Key adjacent call:** Muse Glimmer (Meta, 30B, open-weights, always-on-agent framing) is the second open-weight agent-model release in Line truncated
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## How to use this wiki
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@@ -65,9 +65,9 @@ Deferred until Robin configures connectors or asks for specific documentation:
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- **Slack evidence index** — `/sources/slack.md` (no Slack connector configured yet)
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- **Notion evidence index** — `/sources/notion.md` (no Notion MCP configured yet)
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- **X / Twitter evidence index** — `/sources/x.md` (no X connector configured yet)
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- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-08-08 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`) replaces the prior 24-query lane; third consecutive "no promotable hits" pull under the new query set — zero vendor-anchored life-science items, zero positive `openwiki` hits, three flag-for-traceability items (Managing AI Coding Costs at Scale 290 pts best, OpenAI accidental attack on Hugging Face timeline 192 pts top, Claude Bluetooth-tracking anecdote 100 pts top) are adjacent-only and stay off `/themes.md` per the brief's "Workflow tooling (priority LOW) — surface story-worthy changes only" rule, see HN source page)
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- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08 update attempt skipped — connector not enabled, `TAVILY_API_KEY` missing)
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- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-08 18:11 UTC — covers Robin's Obsidian vault (HEAD `d7df3830` 2026-08-08) + OpenWiki wiki (HEAD `c94940c7` 2026-08-08); 9 new commits since 2026-08-03 fetch (Fernandez Vallone 2026 + Rosero 2026 Microbioreactor + Liu 2026 v2-v11 + 4 经销商 hook 升级); 19 untracked files including 8 new `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index)
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- **Hacker News evidence index** — `/sources/hackernews.md` (active; last refreshed 2026-08-10 18:00 UTC — source-specific LLM-agent topic set (`organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`); fourth consecutive "no promotable hits" pull under the new query set — zero vendor-anchored life-science items, zero positive `openwiki` hits; five flag-for-traceability AI-agent / inference items surfaced this run: **Muse Glimmer** (Meta 30B open-weights "always-on local agent workflows", 759 pts + 9 pts dev-portal variant — strongest adjacent AI-agent signal of the pull, but open-weight AI stays off `/themes.md` per existing scope discipline), **Docker Sandboxes** (517 pts), **Auto mode default in Claude Code** (268 pts — Claude Code is on Robin's stack but wrapper/TUI changes stay adjacent-not-promoted per established rule), **Ante offline coding agent** (66 pts), **Mistral code-as-tool-calls patent** (139 pts) — see HN source page)
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- **Web search evidence index** — `/sources/web-search.md` (active; last successful pull 2026-08-03 18:08 UTC — first pull after the 3-day outage streak; CELLINK × Volumetric new Lumen X + 3Brain Utrecht Summer School + CelVivo ClinoStar 2 / Thailand Lab 2026 surfaced, see source page; 2026-08-08 and 2026-08-10 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing)
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- **Git repo evidence index** — `/sources/git-repo.md` (active; last refreshed 2026-08-10 18:06 UTC — covers Robin's Obsidian vault (HEAD `d97b39ed` 2026-08-10) + OpenWiki wiki (HEAD `2bc03f3` 2026-08-09); 12 commits since 2026-08-03 fetch including the **2026-08-10 Phase A metadata batch + first MOC creation** (`d97b39ed` + `6b717aef` + `3b929c2f`) — frontmatter-hygiene + MOC-discipline sprint, no new external evidence; 19 untracked files including 8 new `02-Clients/Agents/区域-2026-0807.md` distributors-rebuild + `_known_associations.md` association index)
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- **Project / people / company pages** — only created when durable entities emerge from ingested data
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These are intentionally blank until there is real evidence to put in them. Populating them with placeholders would dilute the synthesis layer.
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These are intentionally blank until there is real evidence to put in them. Populating them with placeholders would dilute the synthesis layer..
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+3
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@@ -15,7 +15,7 @@ Per-connector evidence indexes. Each connector gets its own page (for example `g
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| --- | --- | --- |
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| Hacker News (`hackernews-1`, LLM-agent topics) | [/sources/hackernews.md](/sources/hackernews.md) | active |
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| Git repo (`git-repo-1`, Obsidian vault + OpenWiki wiki) | [/sources/git-repo.md](/sources/git-repo.md) | active (last 2026-08-08 18:11 UTC) |
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| Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08 update skipped — connector not enabled, `TAVILY_API_KEY` missing) |
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| Web Search (`web-search-1`, Tavily) | [/sources/web-search.md](/sources/web-search.md) | active (latest pull 2026-08-03; 2026-08-08 and 2026-08-10 update attempts skipped — connector not enabled, `TAVILY_API_KEY` missing) |
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Additional connectors appear here automatically once they are authenticated and ingested at least once.
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@@ -28,7 +28,7 @@ Additional connectors appear here automatically once they are authenticated and
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| Notion | not configured | Notion MCP credentials | Discovery via `openwiki_list_mcp_tools`; do not guess tool names. |
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| X / Twitter | not configured | `OPENWIKI_X_ACCESS_TOKEN` via `openwiki auth x` | Streams: `home_timeline`, `user_posts`, `mentions`, `bookmarks`, `list_posts`. |
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| Web Search | **active** (`web-search-1`) | `TAVILY_API_KEY` (currently empty) | Tavily via LangChain; reads configured queries. Latest successful pull 2026-08-03 18:08 UTC; the 2026-08-08 update was skipped because the connector was not enabled. Evidence at [/sources/web-search.md](/sources/web-search.md). |
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| Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Evidence at [/sources/hackernews.md](/sources/hackernews.md). |
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| Hacker News | **active** (`hackernews-1`) | _(public, no auth)_ | Public feeds (`top`, `new`, `best`) + Algolia HN search queries. Source-specific query set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` (LLM-agent topics per the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories"). Last successful pull 2026-08-10 18:00 UTC — fourth consecutive "no promotable hits" pull under the 6-query set (empty-pulls-on-vendor-queries is normal cadence, not an outage). Evidence at [/sources/hackernews.md](/sources/hackernews.md). |
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| Git repo | **active** (`git-repo-1`) | local repo path | Local Obsidian vault at `/home/ldw/workspace` + OpenWiki wiki at `/home/ldw/.openwiki/wiki` (two configured repos per `~/.openwiki/connectors/git-repo/config.json`). Writes compact manifest; repo itself is source of truth. Evidence at [/sources/git-repo.md](/sources/git-repo.md). Last updated 2026-08-08 18:11 UTC. |
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## How new source pages get created
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@@ -39,4 +39,4 @@ When a connector ingests for the first time, an update run will:
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2. Create `/sources/<connector>.md` with the ingestion manifest, freshness, and compact evidence notes.
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3. Route durable items into the canonical pages and add a row in `/themes.md` if a recurring signal emerges.
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Until then, the new connector only has a row in the active connectors table above and no evidence page of its own.
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Until then, the new connector only has a row in the active connectors table above and no evidence page of its own..
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+127
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---
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type: "Reference"
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title: "Git repo — evidence index (Obsidian vault, Robin)"
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description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD d7df3830, 2026-08-08) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD c94940c7, 2026-08-08). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
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description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD d97b39ed, 2026-08-10) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD 2bc03f3, 2026-08-09). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
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resource: "~/.openwiki/connectors/git-repo/config.json"
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tags: [git-repo, evidence, vault, openwiki-wiki, source]
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tags: [git-repo, evidence, vault, openwiki-wiki, source, 2026-08-10]
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---
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# Git repo — evidence index (Obsidian vault + OpenWiki wiki)
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@@ -21,43 +21,49 @@ help locate things in the vault, not summarize their content.
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`~/.openwiki/connectors/git-repo/config.json`)
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- **Configured repos:**
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- `obsidian-vault` → `/home/ldw/workspace` (Robin Obsidian vault, on
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`main`, HEAD `d7df3830a28a48b0129a46729ab2357e231a2ec5` as of
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2026-08-08).
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`main`, HEAD `d97b39edb328b7e15d28de4a54a6d0bc2dd51274` as of
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2026-08-10).
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- `openwiki-wiki` → `/home/ldw/.openwiki/wiki` (the OpenWiki knowledge
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base itself, on `main`, HEAD `c94940c7d24bdf77680822a86c81355acff93ebf`
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as of 2026-08-08).
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base itself, on `main`, HEAD `2bc03f3ddb54e44d53dfed9366daeee109b82e87`
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as of 2026-08-09).
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- **Auth:** local paths only — no remote, no credentials.
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- **Latest fetch:** `2026-08-08T18:11:31Z` (raw manifest
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`~/.openwiki/connectors/git-repo/raw/2026-08-08T18-11-31-856Z/manifest.json`).
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- **Latest fetch:** `2026-08-10T18:06:19Z` (raw manifest
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`~/.openwiki/connectors/git-repo/raw/2026-08-10T18-06-18-966Z/manifest.json`).
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- **Source config:** `~/.openwiki/connectors/git-repo/config.json`
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- **State:** `~/.openwiki/connectors/git-repo/state.json` records
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`latestIds` per repo; the 2026-08-08 fetch bumped both `obsidian-vault`
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(from `2341383e` to `d7df3830`) and `openwiki-wiki` (from `45af5a4` /
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`9e80977` to `c94940c7`).
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`latestIds` per repo; the 2026-08-10 fetch bumped `obsidian-vault`
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from `d7df3830` (2026-08-08) to `d97b39ed` (2026-08-10, 3 new
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commits in the 24-hour window) and left `openwiki-wiki` at
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`2bc03f3` (2026-08-09, the sources-sync refresh recorded in the
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prior update).
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## obsidian-vault — working-tree status (2026-08-08)
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## obsidian-vault — working-tree status (2026-08-10)
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- **Branch:** `main`
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- **HEAD:** `d7df3830a28a48b0129a46729ab2357e231a2ec5` (obsidian-vault top
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of new remote / post-8-07 sweep)
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- **Ahead of origin/main:** 9 commits (the 2026-07-29 / 2026-07-28 cluster
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was extended by 4–5 new deep-read commits on 2026-08-07 / 2026-08-08).
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- **Dirty:** yes — 8 untracked 8-07 distributor/agent files + the
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literature-stage files Robin works on between commits.
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- **HEAD:** `d97b39edb328b7e15d28de4a54a6d0bc2dd51274` (vault HEAD after
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the **Phase A metadata batch + 2 sample runs** on 2026-08-10)
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- **Ahead of origin/main:** 12 commits (the 2026-08-08 baseline of 9
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commits was extended by the 2026-08-09 Wang 2024 Theranostics OrgOC
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entry `a14758b1` plus the 2026-08-10 Phase A metadata batch
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`d97b39ed` + the 2 sample runs `6b717aef` and `3b929c2f`).
|
||||
- **Dirty:** yes — same untracked file set as the 2026-08-08 fetch
|
||||
(8 `02-Clients/Agents/*2026-0807.md` distributor baseline files + the
|
||||
literature-stage files Robin works on between commits + 5 `文悦精读流水线`
|
||||
yml variants + `dify精读进度-20260805.md` + `rustdesk-selfhosted-2026-08-05.md`
|
||||
+ `literature_deepread_v6.py` etc.).
|
||||
- **Working-tree status (raw manifest, abbreviated):**
|
||||
|
||||
| Status | Path |
|
||||
| --- | --- |
|
||||
| `M` (committed 2026-08-08) | `obsidian-vault/04-Literature/Deep-Reads/Cells/fernandez-vallone-2026-thsdc-brain-organoids.md` (cells paper v2: 双 H1 + 5张真图) |
|
||||
| `M` (committed 2026-08-07) | `obsidian-vault/04-Literature/Deep-Reads/Microbioreactor/literature-microbioreactor-eukaryotic-cell-biomedical-2026.md` (fix v2 with SeaFile links) |
|
||||
| `??` (untracked) | `02-Clients/Agents/全国经销商地图-2026-0807.md` |
|
||||
| `??` (untracked) | `02-Clients/Agents/华北-2026-0807.md` |
|
||||
| `??` (untracked) | `02-Clients/Agents/华东-2026-0807.md` |
|
||||
| `??` (untracked) | `02-Clients/Agents/华南-2026-0807.md` |
|
||||
| `??` (untracked) | `02-Clients/Agents/山东-2026-0807.md` |
|
||||
| `??` (untracked) | `02-Clients/Agents/湖北-2026-0807.md` |
|
||||
| `??` (untracked) | `02-Clients/Agents/西北-2026-0807.md` |
|
||||
| `??` (untracked) | `02-Clients/Agents/西南-2026-0807.md` |
|
||||
| `M` (committed 2026-08-10) | `04-Literature/Deep-Reads/Organoid/2026-07-29_Organoids_disease_modeling_treatment_2026_review.md` (Phase A batch frontmatter — `volume` / `pages` / `authors` array; also touched by `6b717aef` for related back-link) |
|
||||
| `M` (committed 2026-08-10) | `CelVivo_精读报告_04_bioRxiv_PAH_Metabolomics.md` (Phase A batch frontmatter — `volume` / `pages` / `authors` array; also touched by `6b717aef`) |
|
||||
| `M` (committed 2026-08-10) | `obsidian-vault/04-Literature/Deep-Reads/3Brain/shin-2024-thalamocortical-organoids-22q11ds.md` (Phase A batch frontmatter; also touched by `6b717aef`) |
|
||||
| `M` (committed 2026-08-10) | `obsidian-vault/04-Literature/Deep-Reads/Cells/fernandez-vallone-2026-thsdc-brain-organoids.md` (Phase A batch frontmatter; also touched by `6b717aef`) |
|
||||
| `M` (committed 2026-08-10) | `obsidian-vault/04-Literature/Deep-Reads/NBME-ShapeConformal/literature-liu-2026-nbme-shape-conformal-organoid.md` (Phase A batch frontmatter; also touched by `6b717aef`) |
|
||||
| `M` (committed 2026-08-10) | `类器官综述_CMOS_HD_MEA_类器官电生理_2026-06-05.md` (Phase A batch frontmatter; also touched by `6b717aef`) |
|
||||
| `M` (committed 2026-08-10) | `04-Literature/Deep-Reads/wang2024-org-on-chip.md` (方案 2 样品 — 6 frontmatter fields + 7 alt descriptions; also touched by `6b717aef`) |
|
||||
| `A` (committed 2026-08-10) | `04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md` (方案 1 — **first MOC file**; 95 lines; 沙牛《AI 时代的 Obsidian 公开课》课时 1 pattern; `related:` already lists `[[MOC-3Brain-HD-MEA]]` as a forward link) |
|
||||
| `??` (untracked) | `02-Clients/Agents/全国经销商地图-2026-0807.md` + 7 区域 `*2026-0807.md` files (8-07 distributor baseline refresh — see below) |
|
||||
| `??` (untracked) | `04-Literature/Deep-Reads/Brain/2026-08-06_Parfitt_GM_et_al_NatCommun_2024_DJ1_LOF_midbrain_organoid_PD.md` |
|
||||
| `??` (untracked) | `Liu2026_NBME_shape_conformal_organoid.md` |
|
||||
| `??` (untracked) | `Miao2025_Cell_v2.md` |
|
||||
@@ -77,6 +83,10 @@ help locate things in the vault, not summarize their content.
|
||||
|
||||
| Date | Hash | Note |
|
||||
| --- | --- | --- |
|
||||
| 2026-08-10 | `d97b39ed` | **Phase A 批量：6 篇精读加 Front Matter 6 字段** (doi/journal/year/volume/pages/authors/pmid) — Organoids 2026 review + CelVivo PAH + Shin 2024 + Fernandez Vallone 2026 + Liu 2026 + 类器官综述_CMOS_HD_MEA |
|
||||
| 2026-08-10 | `3b929c2f` | **wang2024 方案 2 样品：6 个 Front Matter 字段 + 7 张图加 alt 描述** — `wang2024-org-on-chip.md` |
|
||||
| 2026-08-10 | `6b717aef` | **MOC 方案 1 样品：建 1 个 MOC + 7 篇加 Front Matter (related: 反链)** — first MOC `MOC-类器官与3D培养.md` created; 7 papers got `related:` back-link frontmatter |
|
||||
| 2026-08-09 | `a14758b1` | 精读: Wang 2024 Theranostics 类器官-芯片综述 (7 张配图 + Wiki.js ID 1700) — first Organoid-on-Chip 综述 / 7 大主题板块 |
|
||||
| 2026-08-08 | `d7df3830` | cells paper v2: 双 H1 + 5张真图 (xref) — Fernandez Vallone 2026 |
|
||||
| 2026-08-08 | `6c16dc05` | 精读: Fernandez Vallone 2026 Cells hiPSC 脑类器官 THSDC |
|
||||
| 2026-08-07 | `65fef021` | fix: v2 with SeaFile links — Microbioreactor 2026 |
|
||||
@@ -98,31 +108,54 @@ help locate things in the vault, not summarize their content.
|
||||
| 2026-07-28 | `2718e46d` | feat(literature): Parate 2020 SCRT — PEMF 增强 MSC 旁分泌功能促软骨再生 |
|
||||
| 2026-07-28 | `032de92f` | feat: 精读 Lee 2025 Front Vet Sci 犬脂肪源 MSC 3D 球体 |
|
||||
|
||||
The **2026-08-08 cluster** is the literature flywheel-sync output (Liu
|
||||
2026, Miao 2025 v2, Sharma 2026) — already indexed on
|
||||
[`/sources/literature.md`](/sources/literature.md). The
|
||||
The **2026-08-10 cluster** is a **frontmatter-hygiene + MOC-discipline
|
||||
sprint** rather than new external evidence: (a) **Phase A batch**
|
||||
(`d97b39ed`) standardized 6 deep-read notes with the structured 6-field
|
||||
frontmatter (doi / journal / year / **volume** / **pages** /
|
||||
**authors** array / pmid) that the prior notes had been missing; (b)
|
||||
**方案 2 样品** (`3b929c2f`) added 7 image alt descriptions on top of the
|
||||
6-field frontmatter for `wang2024-org-on-chip.md`; (c) **MOC 方案 1
|
||||
样品** (`6b717aef`) created Robin's first Map-of-Content file
|
||||
(`04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md`, 95 lines, 沙牛《AI
|
||||
时代的 Obsidian 公开课》课时 1 pattern) and added `related:` back-link
|
||||
frontmatter to 7 papers. The MOC's own `related:` list already names
|
||||
the next planned MOC — `[[MOC-3Brain-HD-MEA]]` — plus
|
||||
`[[02-Clients/Agents/_known_associations]]` and
|
||||
`[[02-Active-Deals/CellShot-TriArm-Demo-计划-v2-老师版-2026-07-20]]`,
|
||||
so the MOC pattern is expected to extend.
|
||||
|
||||
The **2026-08-08 cluster** (prior manifest) was the literature
|
||||
flywheel-sync output (Liu 2026, Miao 2025 v2, Sharma 2026) — already
|
||||
indexed on [`/sources/literature.md`](/sources/literature.md). The
|
||||
**2026-08-07 / 2026-08-08 micro-revisions** on Liu 2026 (`a69ad9c4` →
|
||||
`1614ccf9`) are the 8-step SOP rewrite cycle (v3 → v11) Robin re-ran
|
||||
on the same paper.
|
||||
|
||||
## openwiki-wiki — working-tree status (2026-08-08)
|
||||
## openwiki-wiki — working-tree status (2026-08-10)
|
||||
|
||||
- **Branch:** `main`
|
||||
- **HEAD:** `c94940c7d24bdf77680822a86c81355acff93ebf` (the
|
||||
`feat: add Microbioreactor 2026 v4` update commit for the
|
||||
literature index)
|
||||
- **Working-tree state:** 17 staged-but-not-yet-committed file changes
|
||||
(this OpenWiki run's own edits, plus 3 new literature deep-read
|
||||
synthesis pages from the 2026-08-08 flywheel-sync:
|
||||
`sources/literature-liu-2026-nbme-shape-conformal-organoid-deepread.md`,
|
||||
`sources/literature-miao-2025-cell-vascularization-v2-deepread.md`,
|
||||
`sources/literature-sharma-2026-cell-stem-cell-vascularized-retinal-organoid-rgc-deepread.md`).
|
||||
- **HEAD:** `2bc03f3ddb54e44d53dfed9366daeee109b82e87` (the
|
||||
`chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts
|
||||
(sources-sync 2026-08-10)` commit recorded during the prior
|
||||
2026-08-10 update — no new wiki-side commits landed in the 24-hour
|
||||
window since then).
|
||||
- **Working-tree state:** 9 staged-but-not-yet-committed file changes
|
||||
(this OpenWiki run's own edits — the same 17 files from the prior
|
||||
2026-08-08 manifest minus the 3 literature deep-read synthesis pages
|
||||
that the prior 2026-08-10 sources-sync commit already captured:
|
||||
`.last-update.json` + `quickstart.md` + `sources/README.md` +
|
||||
`sources/hackernews.md` + `sources/nocodb.md` + `sources/ragflow.md` +
|
||||
`sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md`).
|
||||
- **Auth:** local path only — no remote, no credentials.
|
||||
|
||||
### Recent commits (latest first)
|
||||
|
||||
| Date | Hash | Note |
|
||||
| --- | --- | --- |
|
||||
| 2026-08-10 | `2bc03f3` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-10) |
|
||||
| 2026-08-09 | `dde053a` | auto: 2026-08-09 Wang 2024 Theranostics OrgOC 综述精读入口 |
|
||||
| 2026-08-09 | `3267338` | chore: daily update 2026-08-09 |
|
||||
| 2026-08-09 | `06f60e1` | chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-08-09) |
|
||||
| 2026-08-08 | `c94940c7` | feat: add Microbioreactor 2026 v4 (PMID 42516424, ID 1696) |
|
||||
| 2026-08-08 | `7f65024` | feat: add Microbioreactor 2026 v3 (PMID 42516424) |
|
||||
| 2026-08-08 | `ea4f14a` | feat: add Microbioreactor 2026 v2 (PMID 42516424) |
|
||||
@@ -145,10 +178,10 @@ on the same paper.
|
||||
| 2026-07-24 | `3102e96` | feat(sources): 全国 261 家经销商地图 (2026-07-24, 不含敏感信息) |
|
||||
|
||||
The wiki repo is the OpenWiki output itself — it persists across
|
||||
update runs. The 2026-08-08 cluster (3 literature deep-read synthesis
|
||||
+ 11 sources-sync + 4 Liu 2026 link fixes) is the work-surface for
|
||||
the 2026-08-08 flywheel-sync, and is the canonical record of what
|
||||
was surfaced to the user during that sync.
|
||||
update runs. No new wiki-side commits landed in the 2026-08-09T18:06Z
|
||||
→ 2026-08-10T18:06Z window: the most recent wiki commit
|
||||
(`2bc03f3`, sources-sync 2026-08-10) was recorded in the prior
|
||||
update.
|
||||
|
||||
## Vault navigation index
|
||||
|
||||
@@ -319,18 +352,50 @@ fields still 待补).
|
||||
- **CellSweep** — referenced in the wiki goal focus areas; not surfaced as a
|
||||
top-level vault folder in this run, so it likely lives under `Work/` or
|
||||
`scripts/` (outside the navigation index).
|
||||
- **Phase A metadata batch + first MOC (2026-08-10)** — Robin ran a
|
||||
frontmatter-hygiene + MOC-discipline sprint on 2026-08-10:
|
||||
(a) **`d97b39ed` Phase A 批量** standardized 6 deep-read notes with the
|
||||
6-field frontmatter (doi / journal / year / **volume** / **pages** /
|
||||
**authors** array / pmid) — `Organoids 2026 review` +
|
||||
`CelVivo PAH Metabolomics` + `Shin 2024 thalamocortical organoids
|
||||
22q11ds` + `Fernandez Vallone 2026 Cells THSDC` + `Liu 2026 NBME
|
||||
shape-conformal organoid` + `类器官综述_CMOS_HD_MEA_类器官电生理_2026-06-05`;
|
||||
(b) **`6b717aef` MOC 方案 1 样品** created the **first MOC** at
|
||||
`04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md` (95 lines,
|
||||
沙牛《AI 时代的 Obsidian 公开课》课时 1 pattern, `type: moc`) and added
|
||||
`related:` back-link frontmatter to 7 papers; (c) **`3b929c2f` wang2024
|
||||
方案 2 样品** added 7 image alt descriptions on top of the 6-field
|
||||
frontmatter for `wang2024-org-on-chip.md`. The MOC's own `related:`
|
||||
list already names `[[MOC-3Brain-HD-MEA]]` as the next planned MOC,
|
||||
plus `[[02-Clients/Agents/_known_associations]]` and
|
||||
`[[02-Active-Deals/CellShot-TriArm-Demo-计划-v2-老师版-2026-07-20]]`,
|
||||
so the pattern is expected to extend. None of the changes add new
|
||||
external evidence — the 6 papers already existed on `main`; this
|
||||
commit set only normalizes their metadata and cross-references. The
|
||||
MOC creation is the first durable structural artifact on the
|
||||
knowledge-graph side and is worth tracking on the next git-repo
|
||||
fetch.
|
||||
|
||||
## Synthesis policy for this source
|
||||
|
||||
- **This run (2026-08-08):** 1 new entry surfaced to `/commitments.md`
|
||||
(`distributor-8-07-association-followup`) + 1 partial-answer update to
|
||||
`/open-questions.md` (`agent-dong-huiqun-celvivo` — agency side now
|
||||
resolved as 济南成全; personal contact + role granularity still
|
||||
待补). The `/themes/05-robin-research.md` truth-of-vault snapshot
|
||||
moves to the new HEAD `d7df3830` and the 2026-08-07 distributor map
|
||||
baseline. The `/sources/distributors-china-2026.md` page absorbs the
|
||||
259-dealer 8-07 baseline (replacing the 261-dealer 7-24 baseline
|
||||
numbers) and the new `_known_associations.md` index.
|
||||
- **This run (2026-08-10):** 3 new vault commits landed in the 24-hour
|
||||
window (Phase A metadata batch + 2 sample runs) — these are
|
||||
**frontmatter-hygiene + MOC-discipline**, not new external evidence.
|
||||
No `/commitments.md`, `/open-questions.md`, `/personal-logistics.md`,
|
||||
or `/themes.md` row changes are warranted by this run; the only
|
||||
pages that need to track the new HEADs are this page
|
||||
(`/sources/git-repo.md`), `/themes/05-robin-research.md` (vault HEAD
|
||||
pointer), and `/quickstart.md` (current-status paragraph). The
|
||||
previous run (2026-08-08) was the substantive update — 1 new entry
|
||||
surfaced to `/commitments.md` (`distributor-8-07-association-followup`)
|
||||
+ 1 partial-answer update to `/open-questions.md`
|
||||
(`agent-dong-huiqun-celvivo` — agency side now resolved as 济南成全;
|
||||
personal contact + role granularity still 待补). The
|
||||
`/themes/05-robin-research.md` truth-of-vault snapshot moves to the
|
||||
new HEAD `d97b39ed` and now also notes the Phase A metadata batch +
|
||||
first MOC creation. The `/sources/distributors-china-2026.md` page
|
||||
still reflects the 259-dealer 8-07 baseline (unchanged since
|
||||
2026-08-08).
|
||||
- The vault is a knowledge base, not a live signal stream; durable
|
||||
per-document synthesis (paper deep reads, sales scripts, customer
|
||||
files) requires reading individual files, which is delegated to the
|
||||
@@ -339,6 +404,14 @@ fields still 待补).
|
||||
theme only when the connector observes a recurring workflow (e.g. weekly
|
||||
literature digest cadence, sales training iteration pattern) across multiple
|
||||
fetches.
|
||||
- **Process signal worth watching (2026-08-10):** Robin started a
|
||||
MOC-discipline sprint — first MOC
|
||||
(`04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md`) created with a
|
||||
forward link to `[[MOC-3Brain-HD-MEA]]`. Track on the next git-repo
|
||||
fetch whether more MOCs land (MOC-3Brain-HD-MEA, MOC-Cellink-BIO-X,
|
||||
etc.) and whether the Phase A batch expands to cover the remaining
|
||||
~1,200 deep-read notes. If the MOC pattern extends to ≥3 MOCs, it
|
||||
may warrant a `/themes.md` annex row on `vault-knowledge-architecture`.
|
||||
|
||||
## Next update
|
||||
|
||||
|
||||
+41
-4
@@ -2,7 +2,7 @@
|
||||
type: "Reference"
|
||||
title: "Hacker News — evidence index"
|
||||
description: "Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items."
|
||||
tags: [hackernews, evidence-index, source]
|
||||
tags: [hackernews, evidence-index, source, 2026-08-10]
|
||||
---
|
||||
|
||||
# Hacker News — evidence index
|
||||
@@ -15,10 +15,47 @@ Compact evidence trail for the Hacker News connector (`hackernews-1`, Robin-cura
|
||||
- **Backend:** public HN feeds (`top`, `new`) + Algolia HN search queries
|
||||
- **Auth:** none — public feeds
|
||||
- **Window:** last 24 hours
|
||||
- **Latest fetch:** `2026-08-08T18:00:44Z` (LLM-agent topic set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` — 6 queries; the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories" is the new query set; prior 2026-08-08 03:15, 2026-08-07 12:29, 2026-08-03 18:00, 2026-08-02 18:00, 2026-08-01 18:00, 2026-07-31 18:00, 2026-07-30 18:00, 2026-07-29 18:00, 2026-07-28 18:00, 2026-07-27 18:00, 2026-07-26 18:16 and 18:00 pulls also documented below)
|
||||
- **Raw dumps:** `~/.openwiki/connectors/hackernews/raw/2026-08-08T18-00-01-989Z/hackernews-results.json` (current — no promotable hits, see 2026-08-08 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T03-14-40-856Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 03:15 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-07T12-29-44-173Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-07 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-03T18-00-02-766Z/hackernews-results.json` (earlier — material findings, see 2026-08-03 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-02T18-00-02-278Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-08-01T18-00-02-274Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-31T18-00-02-519Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-30T18-00-02-784Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-29T18-00-02-667Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-28T18-00-02-178Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-27T18-00-02-615Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-16-06-805Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-00-02-441Z/hackernews-results.json`
|
||||
- **Latest fetch:** `2026-08-10T18:00:52Z` (LLM-agent topic set: `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents` — 6 queries; the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories" is the active query set; prior 2026-08-08 18:00, 2026-08-08 03:15, 2026-08-07 12:29, 2026-08-03 18:00, 2026-08-02 18:00, 2026-08-01 18:00, 2026-07-31 18:00, 2026-07-30 18:00, 2026-07-29 18:00, 2026-07-28 18:00, 2026-07-27 18:00, 2026-07-26 18:16 and 18:00 pulls also documented below)
|
||||
- **Raw dumps:** `~/.openwiki/connectors/hackernews/raw/2026-08-10T18-00-02-327Z/hackernews-results.json` (current — no promotable hits, see 2026-08-10 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T18-00-01-989Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 18:00 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-08T03-14-40-856Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-08 03:15 UTC entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-07T12-29-44-173Z/hackernews-results.json` (prior — no promotable hits, see 2026-08-07 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-03T18-00-02-766Z/hackernews-results.json` (earlier — material findings, see 2026-08-03 entry below) · `~/.openwiki/connectors/hackernews/raw/2026-08-02T18-00-02-278Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-08-01T18-00-02-274Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-31T18-00-02-519Z/hackernews-results.json` (empty) · `~/.openwiki/connectors/hackernews/raw/2026-07-30T18-00-02-784Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-29T18-00-02-667Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-28T18-00-02-178Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-27T18-00-02-615Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-16-06-805Z/hackernews-results.json` · `~/.openwiki/connectors/hackernews/raw/2026-07-26T18-00-02-441Z/hackernews-results.json`
|
||||
|
||||
## Latest update — 2026-08-08 18:00 UTC
|
||||
## Latest update — 2026-08-10 18:00 UTC
|
||||
|
||||
- **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed returned 27 items, `best` feed returned 9; deduplication gave **31 unique items across both feeds** (5 overlap: `49241679` Muse Glimmer, `49244569` Kinney Drugs AI phone-assistant, `49245023` Mars Bar 1991, `49245359` Cognitive Commons, `49246057` Stoa Markets GPU marketplace). The 6-query lane produced the hit table below; the connector completed normally at `fetchedAt: 2026-08-10T18:00:52.763Z` (24-hour window).
|
||||
- **Life-science lane:** **zero vendor-anchored hits across all four named vendor queries.** `organoid` returned 3 hits — all string-collision noise (substring matches on "organiz-" / "organic-"): `49245612` "Show HN: PicPocket – Dedicated 'chats' for photo-sharing (share to organize)" (2 pts, https://picpocket.io/); `49245185` "Show HN: Slashscore, an open developer graph built from public GitHub activity" (2 pts, https://www.slashscore.com, "organizations" string hit); `49238127` "Show HN: SynapsCLI – lightweight agent runtime in Rust, control an agent swarm" (2 pts, https://github.com/HaseebKhalid1507/SynapsCLI, "organically" string hit). `CelVivo` returned `nbHits=0` (no stories indexed in 24h). `3Brain` returned 7 hits — all string-collision noise on the substring "brain" (none relate to the 3Brain HD-MEA / Accura-3D product line): `49244943` "Real Identity in AI: Why Your AI Agent Should Be More Than a Prompt Box" (3 pts, https://brainmox.com/blog/real-identity-in-ai/, brand "brainmox" string hit); `49243294` "To Begin, Begin" (2 pts, https://brainbaking.com/post/2026/08/to-begin-begin/, brand "brainbaking" string hit); `49243269` "Defending my own brain against enshittification" (90 pts, https://mrmarket.lol/..., personal-essay string hit); `49243199` "Would you trust your boss with data about your brain?" (5 pts, https://calmatters.org/..., neurotech-policy string hit); `49243195` "Show HN: Edgi – Letterboxd or Strava for your brain" (4 pts, https://app.edgi.tv/, consumer-product string hit); `49240957` "Brain activity reveals the melodies that people imagine" (4 pts, https://medicalxpress.com/news/2026-07-brain-reveals-melodies-people.html, neuroscience-press string hit); `49236312` "My Brain Doesn't Have Git Worktrees" (2 pts, https://eliasson.me/articles/my-brain-doesnt-have-git-worktrees, dev-essay string hit). `Cellink` returned 5 hits — all string-collision noise on substring "Cell" or author-name fragments (none relate to CELLINK bioprinters): `49246057` "Launch HN: Stoa Markets (YC S26) – A Marketplace for GPUs and AI Servers" (24 pts, https://www.stoaexchange.com, body-text "cell" hit); `49242894` "Wellington second-hand bookstore's mysterious orders" (5 pts, https://www.rnz.co.nz/life/books/..., substring hit); `49241749` "Muse Glimmer: Meta's open model built for always-on local agents. 30B parameters" (9 pts, https://developer.meta.com/ai/models/muse-glimmer/, author-name substring hit — same Meta release as the high-engagement top-feed item `49241679`); `49240499` "Let's Stop Calling Everything 'Linear Attention'" (2 pts, https://htor.inf.ethz.ch/blog/..., substring "Lin" → "Cellin" hit); `49239213` "A second-hand bookstore's mysterious orders" (5 pts, https://www.rnz.co.nz/..., substring hit). A title/URL regex sweep across the 31 unique top+best items also turned up zero organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink / ClinoStar / ClinoReactor / MEA / spheroid / organ-on-chip items. The "no material HN footprint for the 4 vendor lines" finding still holds; the Tavily web-search lane remains the better signal for vendor news.
|
||||
- **Workflow lane:** **zero search-query hits on Robin's named daily-driver stack.** `openwiki` returned `nbHits=0` (no stories indexed in 24h — the `langchain-ai/openwiki` (96 pts) brand signal from 2026-07-16 remains the only positive OpenWiki item and stays pinned at `/themes.md` `openwiki-brand` row Last seen 2026-07-16). `deepagents` returned `nbHits=0` (no stories indexed in 24h). The 31 unique top+best items include five **adjacent, high-engagement AI-agent / inference / agent-infra items** that touch Robin's broader agent-stack lane but stay adjacent-not-promoted under the brief's "low-engagement items are watchlist by default; promotion requires recurrence, strong engagement, or corroboration" rule **and** the `/themes.md` scope discipline ("open-weight AI never earns a `themes.md` row" + workflow-tooling priority LOW):
|
||||
- **49241679** "Muse Glimmer: 30B-parameter model optimized for always-on local agent workflows" (759 pts, 420 cmts — top feed, by `riordan` 2026-08-10T17:30Z, https://research.meta.ai/blog/introducing-muse-glimmer-open-agentic-model). **Highest-engagement item of the pull.** Meta Research blog announcing the open-weights release of **Muse Glimmer**, a 30B-parameter model explicitly optimized for "always-on local agent workflows". Strong topical fit to Theme 3 (AI Agent tools) and Theme 4 (Local LLM): the explicit "local agent workflows" framing places Muse Glimmer in the same inference-provider lane as MiniMax-M3 / MiniMax-H3. **However** the existing `/themes.md` `MiniMax-m3` row is keyed to the MiniMax model family, and Muse Glimmer is a Meta model — not a MiniMax release — so a refresh on the existing row would misrepresent provenance. Under the scope discipline ("open-weight AI never earns a `themes.md` row"), Muse Glimmer does not earn a new theme row either: it is an open-weight release by a vendor outside Robin's named daily-driver stack (Hermes / MiniMax-M3+H3 / OpenWiki / RAGFlow / NocoDB / SeaFile / Codex CLI), and is adjacent to — but not on — Robin's stack. Flagged here as the strongest adjacent AI-agent signal of the pull; if Muse Glimmer recurs (e.g. third-party benchmarks, integration guides, or Hermes-side adoption reports) on a future pull, that becomes the first corroborating source for an `always-on-agent-model` cluster theme row. **Adjacent-not-promoted** per brief.
|
||||
- **49239751** "Docker Sandboxes – Disposable, isolated sandboxes for AI agents" (517 pts, 312 cmts — top feed, by Docker 2026-08-10, https://www.docker.com/products/docker-sandboxes/). Docker's product launch for disposable, isolated agent-execution environments. Strong topical fit to the AI-agent-infra lane but **not** on Robin's named stack — Robin's agent surfaces are Hermes / MiniMax code / Codex CLI running on the desktop / WSL / ITX host, not Docker-containerized agent sandboxes. **Adjacent-not-promoted** per the brief's workflow-tooling priority LOW rule.
|
||||
- **49239021** "Auto mode is now the default in Claude Code" (268 pts, 286 cmts — top feed, by Anthropic 2026-08-10, https://claude.com/blog/auto-mode-default-in-claude-code). Anthropic's product update: Claude Code now runs in auto-mode by default (assumes permission to use tools). **Highest-comment item of the pull** (286 cmts). Claude Code is **on** Robin's stack (he uses it alongside Hermes / MiniMax code / Codex CLI per [`/themes/03-ai-agents.md`](/themes/03-ai-agents.md) § "Codex CLI" cross-references and the OpenWiki速查手册) — so the auto-mode-default change is a real behavioral shift on a named tool. However, the established scope rule is that "Claude Code wrapper / TUI cluster stays adjacent-not-promoted" (see prior 2026-07-27 / 2026-07-30 entries below), and `/themes.md` does not have a `claude-code-defaults` row. Under that rule, this stays adjacent-not-promoted. Flagged here for traceability; if Robin's workflow is materially affected by the auto-mode-default change (e.g. unexpected tool calls during Claude Code sessions), an `/open-questions.md` entry on the operational impact is warranted, but the present data does not establish such impact. **Adjacent-not-promoted** per brief.
|
||||
- **49245437** "Show HN: Ante, a coding agent in a single binary that runs offline" (66 pts, 39 cmts — best feed, by `ubermon` 2026-08-10, https://github.com/AntigmaLabs/ante). Show HN for a Rust-based offline coding agent in a single binary. Strong topical fit to the AI-agent / local-LLM lane (offline-by-design is a close cousin of the "local agent workflows" framing on `49241679`). **Adjacent-not-promoted** per the brief's workflow-tooling priority LOW rule and the open-weight-AI scope discipline.
|
||||
- **49241749** "Muse Glimmer: Meta's open model built for always-on local agents. 30B parameters" (9 pts, 2 cmts — top feed, by `erenberke` 2026-08-10, https://developer.meta.com/ai/models/muse-glimmer/). Developer-portal variant of the Muse Glimmer release (same model as `49241679`; different URL). 9 pts vs 759 pts — the developer-portal URL is the lower-engagement surface. **Adjacent-not-promoted** under the same rationale as `49241679`; flagged here so the 5-pt+ developer-portal variant is not double-counted as an independent signal.
|
||||
- **49243397** "Mistral Patent for 'Code implemented tool calls'" (139 pts, 121 cmts — top feed, by `jmintz` 2026-08-10, https://patentsgazette.uspto.gov/week26/OG/html/1547-5/US12670045-20260630.html). Mistral IP signal on code-as-tool-calls. Adjacent to the agent-tooling lane but **not** on Robin's stack. **Adjacent-not-promoted** per brief.
|
||||
- **49238851** "Show HN: Voice driven murder mystery, Interview AI suspects with your voice" (178 pts, 75 cmts — top feed, by `WhiteDawn` 2026-08-10, https://www.whodunnitai.com/). Consumer entertainment (voice-driven AI suspect game). **Off-scope** per brief.
|
||||
- **Other feed items not promoted:** 24 additional top/best items, all off-scope per the brief's scope filter — `49234675` "How I use LLMs to learn complex topics" (776 pts, 513 cmts, top feed — highest engagement of the pull but off-scope per brief: generic LLM-use essay, no vendor / named-stack overlap); `49244569` "Kinney Drugs pulls back AI phone assistant after hundreds of customer complaints" (88 pts, top feed, https://www.wcax.com/... — AI-in-production news, off-scope); `49242739` "Tl;dv: Over 180k meetings left wide open" (369 pts, top feed — security incident, off-scope); `49238561` "What Happened to HackerOne?" (352 pts, top feed — security industry news, off-scope); `49234271` "I made tinnitus my friend, then it disappeared [video]" (211 pts, top feed — wellness content, off-scope); `49245023` "Mars Bar from 1991 found – and it's 20g bigger than today's" (187 pts, top+best, off-scope news); `49238818` "Run Android ARM64 VR APKs on Apple Vision Pro" (154 pts, top feed — emulation, off-scope); `49242653` "Squeak 6.1" (124 pts, top feed — Smalltalk release, off-scope); `49241846` "Parametron: 50s Japanese computer that uses neither transistors nor vacuum tubes" (122 pts, top feed — retro computing, off-scope); `49243029` "50k Boat Names" (108 pts, top feed — public data, off-scope); `49245251` "Magnitude 7.4 Earthquake – 5 km S of San José del Palmar, Colombia" (95 pts, top feed — natural disaster news, off-scope); `49242297` "Tail-call optimization in C is relatively recent (2025)" (89 pts, top feed — compiler essay, off-scope); `49244916` "Itadakimasu: A word you say to the food, not the cook" (64 pts, top feed — culture essay, off-scope); `49245491` "Exploiting System Management Mode with a very long interrupt" (47 pts, top feed — security research, off-scope); `49245348` "Midlife Vascular Risk Burden and Dementia-Free Survival Years" (35 pts, top feed — neurology paper, life-sciences adjacent but outside Robin's 4 application domains — 3D cell culture / 3D bioprinting / neuroscience in vitro / organoid workflows — so off-scope per brief); `49243474` "Humanising LLM Outputs Is Dumb" (26 pts, top feed — LLM-craft essay, off-scope); `49245359` "The Tragedy of the Cognitive Commons" (25 pts, top+best — arxiv, cognitive science paper, off-scope); `49246057` "Launch HN: Stoa Markets (YC S26) – A Marketplace for GPUs and AI Servers" (24 pts, top+best — returned by `Cellink` query as a substring false-positive — see Life-science lane; off-scope); `49244085` "Exploring Claude/GPT Knowledge Cutoffs and Pre-Training Timelines" (24 pts, top feed — LLM-training essay, off-scope); `49245318` "Extreme 220GHz+Broadband Silicon Capacitor X2SC 0201M 22nF BV11" (20 pts, top feed — electronics datasheet, off-scope); `49244250` "There is no 'done': Reflections on a completed Appalachian Trail thru-hike (2022)" (20 pts, top feed — outdoors essay, off-scope); `49245421` "Back to the Future of Handwriting Recognition (2016)" (18 pts, top feed — HCI retro essay, off-scope); `49245646` "Why Addresses Have Numbers" (16 pts, top feed — history essay, off-scope); `49247070` "Learning more about Claude's mathematical capabilities" (11 pts, top feed — Anthropic research, off-scope); `49246910` "CEO Just Fired 500 People Because He Says Zillow Is More Efficient Without Them" (8 pts, top feed — labor news, off-scope). Engagement range 2–776 pts across the 24 items; none matches a Robin in-scope vendor / customer / application-domain / named-stack keyword.
|
||||
- **Synthesis result:** **no theme refresh, no commitment row, no open-question row, no personal-logistics item.** The `openwiki-brand` watchlist row stays at Last seen 2026-07-16 (no positive `openwiki` hits this pull — confirms the absence is normal cadence, not an outage). All five flag-for-traceability AI-agent / inference items (`49241679` Muse Glimmer top, `49241749` Muse Glimmer dev-portal, `49239751` Docker Sandboxes, `49239021` Claude Code auto-mode, `49245437` Ante offline agent) stay adjacent-not-promoted under the existing scope discipline. **Key call**: Muse Glimmer is the strongest adjacent AI-agent signal of this pull and the second open-weight agent-model release on the same inference-provider lane as MiniMax-H3 (2026-08-03) in less than a week — if a third open-weight agent-model release surfaces on a future pull (or if Hermes / MiniMax code integration guides for Muse Glimmer appear), the `MiniMax-m3` row description can be extended with an "always-on-agent-model cluster" annex without changing the row's stability. **No such annex is added this run** — the second observation alone does not meet the brief's "recurrence" bar. This is the **fourth consecutive "no promotable hits" pull** under the simplified 6-query LLM-agent topic set (after 2026-08-07 12:29, 2026-08-08 03:15, 2026-08-08 18:00 UTC), confirming the empty-pulls-on-vendor-queries pattern is normal cadence under the new query set rather than an outage — no config-side intervention needed.
|
||||
|
||||
| Query lane | Queries run | Qualifying results |
|
||||
| --- | --- | --- |
|
||||
| Life sciences / vendors | `organoid`, `CelVivo`, `3Brain`, `Cellink` | 0 (3+7+5 substring-noise hits, 0 vendor-anchored) |
|
||||
| AI workflow | `openwiki`, `deepagents` | 0 |
|
||||
|
||||
Raw dump: `~/.openwiki/connectors/hackernews/raw/2026-08-10T18-00-02-327Z/hackernews-results.json`.
|
||||
|
||||
### Flag-for-traceability: Muse Glimmer (Meta) — adjacent, off-scope
|
||||
|
||||
- **49241679** (759 pts, 420 cmts, top feed) + **49241749** (9 pts, 2 cmts, top feed) — **same Meta release**, surfaced via two URLs:
|
||||
- 49241679: `https://research.meta.ai/blog/introducing-muse-glimmer-open-agentic-model` ("Muse Glimmer: 30B-parameter model optimized for always-on local agent workflows") — submitted by `riordan` at 2026-08-10T17:30:02Z.
|
||||
- 49241749: `https://developer.meta.com/ai/models/muse-glimmer/` ("Muse Glimmer: Meta's open model built for always-on local agents. 30B parameters") — submitted by `erenberke` at 2026-08-10T10:19:04Z.
|
||||
- Both items describe the **same 30B-parameter open-weights Meta release** explicitly framed as "always-on local agent workflows". The 759-pt top-feed item (research.meta.ai blog URL) is the primary surface; the 9-pt developer.meta.com URL is the lower-engagement developer-portal surface.
|
||||
- **Why adjacent, not promoted:** Muse Glimmer is an open-weights release by Meta. The existing `/themes.md` `MiniMax-m3` row is keyed to the MiniMax model family and does not yet have an "open-weight agent-model cluster" annex. Under the `/themes.md` scope discipline ("open-weight AI never earns a `themes.md` row") and the brief's "low-engagement items are watchlist by default; promotion requires recurrence, strong engagement, or corroboration" rule, **one observation (or one observation across two URL surfaces) does not meet the recurrence bar**. The 2026-08-10 Muse Glimmer release + the 2026-08-03 MiniMax-H3 launch cluster do, however, **establish a recurrence pattern** of "always-on agent model releases" appearing on the same week-and-a-half cadence — flagged here so a future Tavily or HN pull that surfaces a third corroborating item (e.g. Hermes Agent integration guide for Muse Glimmer, or a third open-weight agent-model release) becomes the trigger for the first `always-on-agent-model-cluster` theme annex on `/themes.md`.
|
||||
- **No `/commitments.md` entry added.** No operational impact on Robin's stack confirmed by this release alone.
|
||||
|
||||
### Flag-for-traceability: Docker Sandboxes, Claude Code auto-mode, Ante — adjacent workflow tooling
|
||||
|
||||
- **49239751** (517 pts, 312 cmts) Docker Sandboxes — **adjacent AI-agent-infra signal** (highest-impact item after Muse Glimmer), but Docker is not on Robin's stack. Off-scope per brief.
|
||||
- **49239021** (268 pts, 286 cmts) Claude Code auto-mode default — **Claude Code is on Robin's stack**, and the auto-mode-default change is a real behavioral shift on a named tool. Under the established scope rule that Claude Code wrapper / TUI changes stay adjacent-not-promoted (see prior 2026-07-27 / 2026-07-30 entries below), this stays adjacent. **No `/open-questions.md` entry added** — the present data does not establish operational impact on Robin's workflow (no observed unexpected tool calls, no Claude Code session log anomaly in evidence). If Robin reports a real impact on a future pull, this becomes the first corroborating source for an `open-questions.md` entry on the operational impact of auto-mode-default.
|
||||
- **49245437** (66 pts, 39 cmts) Ante offline coding agent — Rust-based offline coding agent, adjacent to local-LLM + agent lanes. Off-scope per brief.
|
||||
|
||||
## Update — 2026-08-08 18:00 UTC
|
||||
|
||||
- **Coverage:** 2 feeds (`top`, `best`), 6 search queries (the same simplified LLM-agent topic set from the source-specific instruction "Track organoid / CelVivo / 3Brain / Cellink / openwiki / AI agent stories": `organoid`, `CelVivo`, `3Brain`, `Cellink`, `openwiki`, `deepagents`). `top` feed returned 19 unique resolved stories (out of 30 IDs), `best` feed returned 10 (out of 30 IDs); deduplication gave **23 unique items across both feeds** (6 overlap: `49214098` Assembly Hall of Shame, `49216946` DOE Genesis Open Models Initiative, `49218179` NASA Voyager 2, `49214770` Ancient Library, `49220126` DeepMind WeatherNext, `49219508` Hardware backdoors x86). The 6-query lane produced 0 hits for all six queries — `nbHits=null` / zero items returned per query. The connector completed normally at `fetchedAt: 2026-08-08T18:00:44.530Z` (24-hour window).
|
||||
- **Life-science lane:** **zero vendor-anchored hits across all four named vendor queries.** A title/URL regex sweep across the 23 unique top+best items turned up zero matches on organoid / 3D-bioprinting / CelVivo / 3Brain / Cellink / ClinoStar / ClinoReactor / MEA / spheroid / organ-on-chip / bioprinting. The prior 2026-08-08 03:15 UTC finding ("no material HN footprint for the 4 vendor lines") still holds for this 24-hour window; the Tavily web-search lane remains the better signal for vendor news.
|
||||
|
||||
+1
-1
@@ -4,7 +4,7 @@
|
||||
- [Agents 代理商档案索引 — 跨 agent CRM 同步](agents.md) - Cross-agent index of the Obsidian vault 02-Clients/Agents/* profiles (which agents Robin is actively working with, mapped by vendor product line). Base identity only — sensitive fields (phone / WeChat / email / end-customer list / opportunity value) live only in the private vault. Updated 2026-08-07 with _known_associations.md product-line → agent → end-customer mapping.
|
||||
- [全国经销商地图 (2026-08-07 时点)](distributors-china-2026.md) - Compact index of Robin's 2026-08-07 China distributor baseline (259 dealers across 7 regions, replacing 261 in the 2026-07-24 baseline) plus the new product-association index _known_associations.md. Surfaces CelVivo ClinoStar → 济南成全 + FemtoBiomed CellShot → 9X Bio → TriArm Therapeutics chain. Routes pricing-sensitive fields to the private Obsidian vault per /sources/agents.md privacy rule.
|
||||
- [飞书邮箱 (Robin customer mailbox)](feishu-mail.md)
|
||||
- [Git repo — evidence index (Obsidian vault, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD d7df3830, 2026-08-08) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD c94940c7, 2026-08-08). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here.
|
||||
- [Git repo — evidence index (Obsidian vault, Robin)](git-repo.md) - Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD d97b39ed, 2026-08-10) and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD 2bc03f3, 2026-08-09). This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here.
|
||||
- [Hacker News — evidence index](hackernews.md) - Compact evidence trail for the Hacker News connector (hackernews-1, Robin-curated life-sciences + AI workflow). Synthesis lives on /themes.md, /commitments.md, etc.; this page only records ingestion coverage and notable items.
|
||||
- [文献精读 Master Template (Robin 7-27 实战版, "真适合浏览" 1 文件)](ldr-report-template.md)
|
||||
- [Bosnjakovic 2025 PAH 3D 球体代谢组学: 跟 CelVivo ClinoStar dynamic culture 关系 (Bosnjakovic 2025 bioRxiv)](literature-cel-bosnjakovic-2025-pah-deepread.md)
|
||||
|
||||
@@ -1,3 +1,9 @@
|
||||
---
|
||||
type: "Reference"
|
||||
title: "NocoDB 文献库索引 — 跨 agent 数据层"
|
||||
openwiki_generated: true
|
||||
---
|
||||
|
||||
# NocoDB 文献库索引 — 跨 agent 数据层
|
||||
|
||||
> 数据源: NocoDB 13 个文献库 + 2 个公司库 (实时,每次 OpenWiki cron 跑时更新)
|
||||
|
||||
@@ -1,3 +1,9 @@
|
||||
---
|
||||
type: "Reference"
|
||||
title: "RAGFlow 全文检索索引 (Robin KB system)"
|
||||
openwiki_generated: true
|
||||
---
|
||||
|
||||
# RAGFlow 全文检索索引 (Robin KB system)
|
||||
|
||||
> 数据源: RAGFlow (http://10.10.10.254:9980/) 14 个 KB 全文检索结果
|
||||
|
||||
@@ -1,3 +1,9 @@
|
||||
---
|
||||
type: "Reference"
|
||||
title: "SeaFile 大文件存储索引"
|
||||
openwiki_generated: true
|
||||
---
|
||||
|
||||
# SeaFile 大文件存储索引
|
||||
|
||||
> 数据源: SeaFile (http://10.10.10.254:9898/) 共 N 个资料库
|
||||
|
||||
+10
-1
@@ -7,7 +7,15 @@ tags: [source, web-search, tavily, celvivo, 3brain, cellink, organoids]
|
||||
|
||||
# Web Search Evidence
|
||||
|
||||
> Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08 update attempt was skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available.
|
||||
> Connector: `web-search-1` (Tavily). This page records compact, relevant evidence from Tavily pulls; search results are discovery leads, not vendor-confirmed announcements. Latest successful pull: 2026-08-03 18:08 UTC. The 2026-08-08 and 2026-08-10 update attempts were skipped because the connector is disabled and `TAVILY_API_KEY` is not present; no new 24-hour evidence was available on either run.
|
||||
|
||||
## 2026-08-10 attempted update — skipped
|
||||
|
||||
- **Status:** skipped. `web-search-1` is not enabled; the connector reports that `enabled=true` must be set in `~/.openwiki/connectors/web-search/config.json`.
|
||||
- **Authentication:** `TAVILY_API_KEY` is not present, so no Tavily request was made.
|
||||
- **Coverage:** no raw data files were written for this attempted 24-hour window. No new CelVivo, 3Brain, Cellink, or organoid findings were available for synthesis; the latest successful pull remains 2026-08-03 18:08 UTC.
|
||||
- **Synthesis:** no changes were made to `/themes.md`, `/commitments.md`, `/open-questions.md`, or `/personal-logistics.md` from this source attempt.
|
||||
- **Operational note (cross-check):** the on-disk `~/.openwiki/connectors/web-search/config.json` does show `enabled: true` plus 6 Chinese-language queries (`CelVivo ClinoStar ClinoReactor 类器官培养新进展`, `3Brain HD-MEA 高密度微电极阵列 电生理`, `Cellink BIO X 3D生物打印 类器官`, `Femtobiomed CellShot 流式电转 精准医疗`, `类器官 vendor 2026年新发布`, `MiniMax M3 智能体 Hermes`). The agent runtime still reports the connector as disabled, so there is a discrepancy between disk config and runtime registry. This is an operational concern (connector enable / auth / re-registration), not a wiki-synthesis concern, and is recorded here for traceability rather than triggering wiki edits.
|
||||
|
||||
## 2026-08-08 attempted update — skipped
|
||||
|
||||
@@ -469,6 +477,7 @@ Every query in the 10-query lane returned the same structured error (no answer t
|
||||
- Pull 9: fetched 2026-08-01T18:09:15Z — raw `~/.openwiki/connectors/web-search/raw/2026-08-01T18-07-35-101Z/web-search-results.json` — **all 10 queries returned `"error": "fetch failed"`; no usable evidence (gap-fill, not documented at the time)**
|
||||
- Pull 10: fetched 2026-08-02T18:07:53Z — raw `~/.openwiki/connectors/web-search/raw/2026-08-02T18-06-12-521Z/web-search-results.json` — **all 10 queries returned `"error": "fetch failed"`; no usable evidence**
|
||||
- Pull 11: fetched 2026-08-03T18:08:50Z — raw `~/.openwiki/connectors/web-search/raw/2026-08-03T18-07-31-803Z/web-search-results.json` — **first successful pull after the 3-day outage streak; Tavily back online; see section below**
|
||||
- Pull 12: attempted 2026-08-10T18:35Z — **skipped** (connector reported disabled; `TAVILY_API_KEY` not present; no raw files written; no synthesis update)
|
||||
- Queries: pulls 1, 2, 4, 5, 6, 7, 8, 9, 10, 11 = 10 queries each; pull 3 = 6 queries (vendor-anchored only)
|
||||
- Instance: `web-search-1`
|
||||
|
||||
|
||||
@@ -1,3 +1,9 @@
|
||||
---
|
||||
type: "Reference"
|
||||
title: "Wiki.js 索引 — 跨 agent 文档发布层"
|
||||
openwiki_generated: true
|
||||
---
|
||||
|
||||
# Wiki.js 索引 — 跨 agent 文档发布层
|
||||
|
||||
> 数据源: Wiki.js (http://10.10.10.254:3000/graphql) Biokingdom 实例
|
||||
|
||||
@@ -22,7 +22,7 @@ This is the synthesis page for **Robin 个人研究项目** — the durable body
|
||||
|
||||
```mermaid
|
||||
erDiagram
|
||||
VAULT["Obsidian vault (d7df3830)"] ||--o{ DEEPREADS["Deep-read notes ~1,202"]
|
||||
VAULT["Obsidian vault (d97b39ed)"] ||--o{ DEEPREADS["Deep-read notes ~1,202"]
|
||||
VAULT ||--o{ TRAIN["Sales training (CelVivo赋能培训 v1-v9)"]
|
||||
VAULT ||--o{ SALES["Active sales pipeline (惠百生物 PO + 中间商)"]
|
||||
VAULT ||--o{ CRM["Distributor profiles (董慧群 + 待补)"]
|
||||
@@ -30,6 +30,7 @@ erDiagram
|
||||
VAULT ||--o{ INDUSTRIAL["Industrial customers (CelVivo中国工业客户开发)"]
|
||||
VAULT ||--o{ MEMORY["Daily + weekly reports (memory/ 147 .md)"]
|
||||
VAULT ||--o{ ITX["ITX 24h host build (untracked)"]
|
||||
VAULT ||--o{ MOC["MOCs (类器官与3D培养 first, +planned)"]
|
||||
|
||||
DEEPREADS }o--|| VENDOR["Vendor mapping"]
|
||||
VENDOR ||--|{ CelVivo["CelVivo (ClinoStar / ClinoReactor)"]
|
||||
@@ -48,17 +49,18 @@ The diagram shows Robin's research substrate: a single Obsidian vault with 8 buc
|
||||
|
||||
## Knowledge substrate: Obsidian vault
|
||||
|
||||
Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-08T18:11:31Z):
|
||||
Snapshot from [`/sources/git-repo.md`](/sources/git-repo.md) (last fetch 2026-08-10T18:06:19Z):
|
||||
|
||||
| Field | Value |
|
||||
| --- | --- |
|
||||
| Repo path | `/home/ldw/workspace` |
|
||||
| Branch | `main` |
|
||||
| HEAD | `d7df3830a28a48b0129a46729ab2357e231a2ec5` (2026-08-08) |
|
||||
| Ahead of origin/main | 9 commits new since 2026-08-03 fetch (Fernandez Vallone 2026 + Microbioreactor 2026 + Liu 2026 v2-v11 + 4 经销商 hook 升级); plus 19 untracked files in working tree |
|
||||
| HEAD | `d97b39edb328b7e15d28de4a54a6d0bc2dd51274` (2026-08-10) |
|
||||
| Ahead of origin/main | 12 commits new since 2026-08-03 fetch (Fernandez Vallone 2026 + Microbioreactor 2026 + Liu 2026 v2-v11 + 4 经销商 hook 升级 + Wang 2024 Theranostics + **Phase A metadata batch + 2 sample runs**); plus 19 untracked files in working tree |
|
||||
| Auth | local path only — no remote, no credentials |
|
||||
| Working-tree state | dirty (1 nested-submodule + 1 untracked dir + 19 untracked files including 8 new `02-Clients/Agents/区域-2026-0807.md`) |
|
||||
| Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-08T18-11-31-856Z/manifest.json` |
|
||||
| Raw manifest | `~/.openwiki/connectors/git-repo/raw/2026-08-10T18-06-18-966Z/manifest.json` |
|
||||
| **Latest cluster (2026-08-10)** | **Phase A metadata batch** (`d97b39ed`) + **MOC 方案 1 样品** (`6b717aef`, first MOC `MOC-类器官与3D培养.md`) + **wang2024 方案 2 样品** (`3b929c2f`, 7 image alt descriptions) — frontmatter-hygiene + MOC-discipline sprint, no new external evidence |
|
||||
|
||||
### Vault navigation index (top-level folders)
|
||||
|
||||
@@ -174,12 +176,14 @@ From [`/sources/ldr-report-template.md`](/sources/ldr-report-template.md) (Robin
|
||||
| Miao 2025 Cell v2 (2026-08-08 flywheel-sync) | CelVivo (ClinoStar rating 5) | `/home/ldw/workspace/Miao2025_Cell_v2.md` | [`/sources/literature-miao-2025-cell-vascularization-v2-deepread.md`](/sources/literature-miao-2025-cell-vascularization-v2-deepread.md) |
|
||||
| Liu 2026 Nat Biomed Eng (2026-08-08 flywheel-sync) | 3Brain (HD-MEA rating 5) + Cellink (microlattice rating 5) | `/home/ldw/workspace/Liu2026_NBME_shape_conformal_organoid.md` | [`/sources/literature-liu-2026-nbme-shape-conformal-organoid-deepread.md`](/sources/literature-liu-2026-nbme-shape-conformal-organoid-deepread.md) |
|
||||
|
||||
## Recent 30-day research output (mtime 2026-06-16 → 2026-08-08)
|
||||
## Recent 30-day research output (mtime 2026-06-16 → 2026-08-10)
|
||||
|
||||
From [`/sources/literature.md`](/sources/literature.md) last sync, broken out by vendor and date:
|
||||
|
||||
| Date | DOI / slug | Vendor | Topic |
|
||||
| --- | --- | --- | --- |
|
||||
| 2026-08-10 | **Phase A metadata batch + first MOC** (commits `d97b39ed` + `6b717aef` + `3b929c2f`) | (process discipline) | 6 deep-reads received the 6-field frontmatter (doi/journal/year/volume/pages/authors/pmid); first MOC `MOC-类器官与3D培养.md` (95 lines, 沙牛《AI 时代的 Obsidian 公开课》课时 1 pattern) created at `04-Literature/Deep-Reads/MOCs/`; 7 image alt descriptions added on `wang2024-org-on-chip.md`. No new external evidence. |
|
||||
| 2026-08-09 | `10.7150/thno.90492` (Wang 2024) | (4 类共性硬件 — Organoid-on-Chip 综述) | Wang H et al. (2024) Human organoids-on-chips for biomedical research and applications (Theranostics 14(2):788-818, PMID 38169573; 7 图覆盖 7 大主题板块) — Wiki.js ID 1700 (v2 - grp:3 ghost page 累加) |
|
||||
| 2026-08-08 | `10.3390/cells15110963` (Fernandez Vallone 2026) | (NAMs adjacent, hiPSC brain organoid) | THSDC chemical evaluation platform using hiPSC brain organoids (Cells, v2 5 张真图 + 双 H1; Wiki.js Id 1698) |
|
||||
| 2026-08-08 | `10.3389/fbioe.2026.1854988` (Rosero 2026) | CelVivo + Cellink + FemtoBiomed adjacent | Microbioreactor design Mini Review (Front Bioeng Biotechnol; 6× productivity vs T-flask; 4 applications: CAR-T / mAb / iPSC / organoid) |
|
||||
| 2026-08-08 | `10.1038/s41551-026-01620-y` (Liu 2026) | 3Brain (HD-MEA rating 5) + Cellink (microlattice rating 5) | Shape-conformal porous framework for full-coverage neural organoid e-phys — Rogers Lab, Nat Biomed Eng |
|
||||
@@ -204,14 +208,15 @@ From [`/sources/literature.md`](/sources/literature.md) last sync, broken out by
|
||||
|
||||
By vendor (30-day mtime):
|
||||
|
||||
| Vendor | Most recent | 2026-08-08 additions |
|
||||
| Vendor | Most recent | 2026-08-08 / 2026-08-10 additions |
|
||||
| --- | --- | --- |
|
||||
| CelVivo | 2026-08-08 (Miao 2025 v2 — ClinoStar rating 5) | +Miao 2025 v2 (ClinoStar co-differentiation), +Sharma 2026 (ClinoStar rating 3 adjacent), +Liu 2026 (ClinoStar rating 4 adjacent) |
|
||||
| 3Brain | 2026-08-08 (Liu 2026 — HD-MEA rating 5) | +Liu 2026 (shape-conformal framework, next-gen HD-MEA), +Sharma 2026 (HD-MEA rating 4 adjacent) |
|
||||
| 3Brain | 2026-08-08 (Liu 2026 — HD-MEA rating 5) | +Liu 2026 (shape-conformal framework, next-gen HD-MEA), +Sharma 2026 (HD-MEA rating 4 adjacent), +Shin 2024 (Phase A frontmatter hygiene on existing note) |
|
||||
| Cellink | 2026-07-27 (Tasevska 2025) | +Liu 2026 (microlattice fabrication rating 5 adjacent) |
|
||||
| Adjacent (no vendor) | 2026-08-08 (Sharma 2026 retinal vascularization) | +Sharma 2026 (retinal organoid application domain) |
|
||||
| (Process discipline) | 2026-08-10 (Phase A batch + first MOC) | +6 deep-reads received 6-field frontmatter; +first MOC `MOC-类器官与3D培养.md` created; +7 image alt descriptions on Wang 2024 — no new external evidence |
|
||||
|
||||
The pipeline is **vendor-balanced** — CelVivo, 3Brain, Cellink each have a recent deep read, and today's flywheel-sync (2026-08-08) adds **3 papers spanning all 3 primary vendors + the retinal organoid application domain** (Sharma), all 3 rated 4-5 on at least one vendor's product line. The **first entry in the new NocoDB table `Robin_Picked_Papers`** is Liu 2026 (created 2026-08-08 per Robin instruction to capture papers Robin hand-picks / provides outside the regular PubMed triage).
|
||||
The pipeline is **vendor-balanced** — CelVivo, 3Brain, Cellink each have a recent deep read, and the 2026-08-08 flywheel-sync adds **3 papers spanning all 3 primary vendors + the retinal organoid application domain** (Sharma), all 3 rated 4-5 on at least one vendor's product line. The 2026-08-10 cluster is **process discipline** (Phase A metadata batch + first MOC creation + Wang 2024 alt-description sample), not new external evidence — the 6 deep-reads already existed on `main`; the 3 commits only normalize their metadata and add a knowledge-graph index layer. The **first entry in the new NocoDB table `Robin_Picked_Papers`** is Liu 2026 (created 2026-08-08 per Robin instruction to capture papers Robin hand-picks / provides outside the regular PubMed triage). The **first MOC** `MOC-类器官与3D培养.md` is the start of a Map-of-Content layer Robin appears to be building (the MOC's own `related:` already names `[[MOC-3Brain-HD-MEA]]` as the next planned MOC).
|
||||
|
||||
## Sales ammunition pipeline
|
||||
|
||||
@@ -347,6 +352,25 @@ These are source-anchored but not vendor-anchored — they live here for traceab
|
||||
- **Work-rhythm snapshot connector** — currently a one-shot `find -mtime` shell command (see `/sources/vault-mtime-snapshot-2026-07-16.md` header). Promote to a weekly cron + auto-write to `/sources/vault-mtime-snapshot-weekly.md` so the work-rhythm signal is durable, not single-snapshot.
|
||||
- **End-customer dossier cross-agent page** — 11+ dossiers live in private vault; consider adding a redacted `[name, focus, vendor, region, vault-path]` table to `/sources/agents.md` parallel to the distributor profile pattern. Robin decision pending.
|
||||
- **CellShot-TriArm demo plan v3** — current demo plans are v1 (2026-07-21) and v2 (2026-07-22, 邮件用 + 老师版 two-commit split). No v3 yet; the v2 plan lives in vault commit history `1787702c` / `62877d1f` / `62d09c5f`. Promote to `/commitments.md` when v3 lands.
|
||||
- **MOC pattern extension (2026-08-10 onward)** — Robin created the first MOC
|
||||
(`04-Literature/Deep-Reads/MOCs/MOC-类器官与3D培养.md`, commit `6b717aef`,
|
||||
95 lines, 沙牛《AI 时代的 Obsidian 公开课》课时 1 pattern); the MOC's
|
||||
`related:` list already names the next planned MOC —
|
||||
`[[MOC-3Brain-HD-MEA]]` — plus
|
||||
`[[02-Clients/Agents/_known_associations]]` and
|
||||
`[[02-Active-Deals/CellShot-TriArm-Demo-计划-v2-老师版-2026-07-20]]`.
|
||||
Track on the next git-repo fetch whether the MOC pattern extends to
|
||||
MOC-3Brain-HD-MEA, MOC-Cellink-BIO-X, MOC-Femtobiomed-CellShot, etc.
|
||||
If ≥3 MOCs land, consider adding a `/themes.md` annex row on
|
||||
`vault-knowledge-architecture` and a `/sources/` page that maps the
|
||||
MOC graph (file → topics → cross-refs → flywheel cron hooks).
|
||||
- **Phase A frontmatter batch rollout (2026-08-10 onward)** — Phase A
|
||||
standardized 6 deep-read notes with the 6-field frontmatter
|
||||
(doi / journal / year / volume / pages / authors / pmid); ~1,196
|
||||
deep-read notes remain without the new fields. Track rollout
|
||||
cadence — if Robin completes the batch on a fixed cadence (e.g.
|
||||
daily/weekly cron), document the cadence here so future agents can
|
||||
answer "what is the frontmatter hygiene status of the vault?".
|
||||
|
||||
## What to read next
|
||||
|
||||
|
||||
Reference in new issue
Block a user