chore: daily update 2026-09-06

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---
type: "Reference"
title: "Git repo — evidence index (Obsidian vault + OpenWiki wiki, Robin)"
description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD `391e4713`, 2026-09-04, **vault HEAD unchanged** at the 2026-08-31T18:09Z fetch level for the 4th consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster, **0 new vault commits** in the 2026-09-03T18:09Z → 2026-09-04T18:12Z 24-hour window, **4 calendar days of vault silence** since the 2026-08-31 cluster (Yan + Stewart + Nguyen + Aiello + Miao all `obsidian-vault/04-Literature/Deep-Reads/CelVivo/`) remains the most recent committed vault activity); carry-forward untracked-file set bumps: `Review/zhou2023_computer_vision_microfluidics.md` 23 → **24-day carry-forward** (21 → **22 fetches silent**, stale carry-forward note per 2026-08-28 demotion), `celvivo_commercial/` + `templates/` 18 → **19-day carry-forward** (both confirmed one-off alongside `Review/` at the 2026-08-28 fetch, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 + 2026-09-03 + **2026-09-04** fetches), `deepread_40240593/` 11 → **12-day carry-forward** (mtime unchanged across **11 consecutive silent fetches** since creation, working-folder pipeline hypothesis continuing to weaken); and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD `88635edc7a35488280cf4cbf87750f6ac5e517ed`, 2026-09-04, **2 new automated wiki commits in the 2026-09-03T18:09Z → 2026-09-04T18:12Z 24-hour window: `ab49afd` chore: daily update 2026-09-04 (per `git show --stat ab49afd` the commit touched 14 files including `.last-update.json` + `index.md` + `quickstart.md` + `sources/README.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md` + `themes.md` + `themes/05-robin-research.md`), then `88635ed` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-04 — the **twenty-first** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + `1003b92` 2026-08-25 + `ebb95c0` 2026-08-26 + `502281f` 2026-08-27 + `c992dd6` 2026-08-28 + `37d1ba6` 2026-08-29 + `d56da3a` 2026-08-30 + `9582dea` 2026-08-31 + `0890fdb` 2026-09-01 + `cedbb7f` 2026-09-02 + `58168e7` 2026-09-03 + now `88635ed` 2026-09-04) committed `sources/{nocodb,ragflow,seafile,wikijs}.md` re-touched by the sources-sync; the very next synthesis edits from the HN-1 2026-09-04T18:00Z + web-search-1 2026-09-04 (skipped) + this git-repo-1 2026-09-04T18:12Z run re-touch the same files leaving the dirty count at **10 per the manifest `changedFiles` list** — `M .last-update.json` + `M index.md` + `M quickstart.md` + `M sources/hackernews.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes.md` — **1 fewer than the 2026-09-03T18:09Z fetch's 11-dirty-file baseline** because the `ab49afd` daily update cycle on 2026-09-04 did not re-touch `themes/05-robin-research.md` + `sources/git-repo.md` + `sources/index.md` + `sources/README.md` + `themes/index.md` (those files had been touched by the prior `7aba9cb` 2026-09-03 daily update and not picked up by the CLI metadata cycle on 2026-09-04); the remaining 10 dirty files include the 4 source-sync files (`sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/wikijs.md`) re-touched by the `88635ed` sources-sync after the `ab49afd` daily update had cleared them + the CLI metadata cycle on `themes.md` + `.last-update.json` + `index.md` + `quickstart.md` + `sources/hackernews.md`)**. This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
tags: [sources, git-repo, vault, wiki, manifest, 2026-09-04, 2026-09-03, 2026-09-02, 2026-09-01, 2026-08-31, vault-silent-4d, twenty-first-sources-sync, review-templates-celvivo-commercial-confirmed-one-off, deepread-40240593-twelve-silent-fetches]
timestamp: 2026-09-04T18:12:00Z
description: "Compact manifest of Robin's Obsidian vault + the local OpenWiki wiki, ingested through the local git-repo connector. Two configured repos: obsidian-vault at /home/ldw/workspace (main branch, HEAD `391e4713`, 2026-09-05, **vault HEAD unchanged** at the 2026-08-31T18:09Z fetch level for the 5th consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster, **0 new vault commits** in the 2026-09-04T18:12Z → 2026-09-05T18:18Z 24-hour window, **5 calendar days of vault silence** since the 2026-08-31 cluster (Yan + Stewart + Nguyen + Aiello + Miao all `obsidian-vault/04-Literature/Deep-Reads/CelVivo/`) remains the most recent committed vault activity); carry-forward untracked-file set bumps: `Review/zhou2023_computer_vision_microfluidics.md` 24 → **25-day carry-forward** (22 → **23 fetches silent**, stale carry-forward note per 2026-08-28 demotion), `celvivo_commercial/` + `templates/` 19 → **20-day carry-forward** (both confirmed one-off alongside `Review/` at the 2026-08-28 fetch, carrying forward unchanged at the 2026-08-29 + 2026-08-30 + 2026-08-31 + 2026-09-01 + 2026-09-02 + 2026-09-03 + 2026-09-04 + **2026-09-05** fetches), `deepread_40240593/` 12 → **13-day carry-forward** (mtime unchanged across **12 consecutive silent fetches** since creation, working-folder pipeline hypothesis continuing to weaken); and openwiki-wiki at /home/ldw/.openwiki/wiki (main branch, HEAD `0be3b8a3a44194ad947c3b1a14440f3d12d278d3`, 2026-09-05, **2 new automated wiki commits in the 2026-09-04T18:12Z → 2026-09-05T18:18Z 24-hour window: `ca1acf8` chore: daily update 2026-09-05 (per `git show --stat ca1acf8` the commit touched 16 files including `.last-update.json` + `index.md` + `quickstart.md` + `sources/README.md` + `sources/git-repo.md` + `sources/hackernews.md` + `sources/index.md` + `sources/nocodb.md` + `sources/ragflow.md` + `sources/seafile.md` + `sources/web-search.md` + `sources/wikijs.md` + `themes.md` + `themes/05-robin-research.md` + `themes/index.md`), then `0be3b8a` chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-05 — the **twenty-second** consecutive sources-sync re-applying the 2026-08-15 count-data wipe pattern after `997b648` 2026-08-16 + `be49285` 2026-08-17 + `1fc73ae` 2026-08-18 + `dcb53a2` 2026-08-19 + `bd30339` 2026-08-20 + `f6c2576` 2026-08-21 + `43d4548` 2026-08-22 + `8f8f767` 2026-08-23 + `127c2dc` 2026-08-24 + `1003b92` 2026-08-25 + `ebb95c0` 2026-08-26 + `502281f` 2026-08-27 + `c992dd6` 2026-08-28 + `37d1ba6` 2026-08-29 + `d56da3a` 2026-08-30 + `9582dea` 2026-08-31 + `0890fdb` 2026-09-01 + `cedbb7f` 2026-09-02 + `58168e7` 2026-09-03 + `88635ed` 2026-09-04 + now `0be3b8a` 2026-09-05) committed `sources/{nocodb,ragflow,seafile,wikijs}.md` re-touched by the sources-sync; the very next synthesis edits from the HN-1 2026-09-05T18:00Z + web-search-1 2026-09-05 (skipped) + this git-repo-1 2026-09-05T18:18Z run re-touch the same files leaving the dirty count at **11 per the manifest `changedFiles` list** — `M .last-update.json` + `M index.md` + `M quickstart.md` + `M sources/hackernews.md` + `M sources/index.md` + `M sources/nocodb.md` + `M sources/ragflow.md` + `M sources/seafile.md` + `M sources/web-search.md` + `M sources/wikijs.md` + `M themes.md` — **1 more than the 2026-09-04T18:12Z fetch's 10-dirty-file baseline** because the `ca1acf8` daily update cycle on 2026-09-05 re-touched `sources/index.md` (the 2026-09-04 daily update had not) and the `0be3b8a` sources-sync re-touched the 4 source-sync files that the daily update had cleared; the 11-dirty-file list does not include `themes/05-robin-research.md` (the 2026-09-04 daily update had re-touched it) or `sources/git-repo.md` + `sources/README.md` (the 2026-09-04 daily update had re-touched them and the 2026-09-05 daily update did not re-touch them) or `themes/index.md` (the 2026-09-04 daily update had re-touched it)**. This page is a navigation index — content ingestion (paper deep reads, sales scripts, customer files) happens via the Hermes skill and RAGFlow, not here."
tags: [sources, git-repo, vault, wiki, manifest, 2026-09-05, 2026-09-04, 2026-09-03, 2026-09-02, 2026-09-01, 2026-08-31, vault-silent-5d, twenty-second-sources-sync, review-templates-celvivo-commercial-confirmed-one-off, deepread-40240593-thirteen-silent-fetches]
timestamp: 2026-09-05T18:18:00Z
---
# Git repo — evidence index
@@ -15,26 +15,26 @@ This page is the **compact source-evidence index** for the local git-repo connec
- Connector config path: `~/.openwiki/connectors/git-repo/config.json`
- Two configured local repos:
- `obsidian-vault` at `/home/ldw/workspace` (branch: `main`, HEAD `391e4713`, 2026-08-31 — 35 commits since 2026-08-03 fetch)
- `openwiki-wiki` at `/home/ldw/.openwiki/wiki` (branch: `main`, HEAD `88635ed`, 2026-09-04)
- `openwiki-wiki` at `/home/ldw/.openwiki/wiki` (branch: `main`, HEAD `0be3b8a`, 2026-09-05)
- Authentication: local path only — no remote, no credentials
## Latest manifest
- `~/.openwiki/connectors/git-repo/raw/2026-09-04T18-12-59-869Z/manifest.json` (generated 2026-09-04T18:12:59Z)
- `~/.openwiki/connectors/git-repo/raw/2026-09-05T18-18-02-337Z/manifest.json` (generated 2026-09-05T18:18:02Z)
- Vault HEAD: `391e47131679ce9edf0f525236e78ebb13e0d232` (unchanged since 2026-08-31T13:42 +0800)
- Wiki HEAD: `88635edc7a35488280cf4cbf87750f6ac5e517ed` (bumped from `58168e7` at 2026-09-04)
- **0 new vault commits** in the 24-hour window (vault silent for the 4th consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster)
- **2 new automated wiki commits** in the 24-hour window (`ab49afd` daily update 2026-09-04 + `88635ed` sources-sync 2026-09-04 — the **twenty-first** consecutive sources-sync)
- 10 uncommitted wiki files in working tree per the manifest `changedFiles` list (down 1 from the 11-dirty-file baseline at the 2026-09-03T18:09Z fetch)
- Wiki HEAD: `0be3b8a3a44194ad947c3b1a14440f3d12d278d3` (bumped from `88635ed` at 2026-09-05)
- **0 new vault commits** in the 24-hour window (vault silent for the 5th consecutive fetch since the 2026-08-31 THIRD consecutive 5-paper CelVivo LDR cluster)
- **2 new automated wiki commits** in the 24-hour window (`ca1acf8` daily update 2026-09-05 + `0be3b8a` sources-sync 2026-09-05 — the **twenty-second** consecutive sources-sync)
- 11 uncommitted wiki files in working tree per the manifest `changedFiles` list (up 1 from the 10-dirty-file baseline at the 2026-09-04T18:12Z fetch)
## Carry-forward untracked directories
| Directory / file | Carry-forward | Fetches silent | Status |
| --- | ---: | ---: | --- |
| `Review/zhou2023_computer_vision_microfluidics.md` | **24-day** | 22 | stale carry-forward note (confirmed one-off at 2026-08-27 fetch, demoted at 2026-08-28 fetch) |
| `celvivo_commercial/` | **19-day** | 19 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
| `templates/` | **19-day** | 19 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
| `deepread_40240593/` | **12-day** | 11 | working-folder pipeline hypothesis continuing to weaken (mtime unchanged across 11 consecutive silent fetches since creation) |
| `Review/zhou2023_computer_vision_microfluidics.md` | **25-day** | 23 | stale carry-forward note (confirmed one-off at 2026-08-27 fetch, demoted at 2026-08-28 fetch) |
| `celvivo_commercial/` | **20-day** | 20 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
| `templates/` | **20-day** | 20 | stale carry-forward note (confirmed one-off alongside `Review/` at 2026-08-28 fetch) |
| `deepread_40240593/` | **13-day** | 12 | working-folder pipeline hypothesis continuing to weaken (mtime unchanged across 12 consecutive silent fetches since creation) |
## Recent commits — vault (last 5)
@@ -48,19 +48,19 @@ The most recent vault commits remain the 2026-08-31 THIRD consecutive single-day
## Recent commits — wiki (last 5)
1. `88635ed` 2026-09-04 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-04, **twenty-first** consecutive sources-sync)
2. `ab49afd` 2026-09-04 — chore: daily update 2026-09-04 (14 files modified per `git show --stat ab49afd`)
3. `58168e7` 2026-09-03 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-03, twentieth consecutive sources-sync)
4. `7aba9cb` 2026-09-03 — chore: daily update 2026-09-03 (16 files modified per `git show --stat 7aba9cb`)
5. `cedbb7f` 2026-09-02 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-02, nineteenth consecutive sources-sync)
1. `0be3b8a` 2026-09-05 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-05, **twenty-second** consecutive sources-sync)
2. `ca1acf8` 2026-09-05 — chore: daily update 2026-09-05 (16 files modified per `git show --stat ca1acf8`)
3. `88635ed` 2026-09-04 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-04, twenty-first consecutive sources-sync)
4. `ab49afd` 2026-09-04 — chore: daily update 2026-09-04 (14 files modified per `git show --stat ab49afd`)
5. `58168e7` 2026-09-03 — chore(sources): refresh NocoDB/SeaFile/Wiki.js/RAGFlow counts (sources-sync 2026-09-03, twentieth consecutive sources-sync)
## Synthesis-policy — this run
- Vault delta: empty (no new commits, no new mtime changes).
- Wiki delta: automated maintenance only.
- Synthesis-layer impact: **none**. The themes / commitments / open-questions / personal-logistics pages are independent of the wiki-side automated maintenance commits.
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-04T18:12Z)" paragraph on `/quickstart.md` for the full delta list.
- Wiki edits: see the corresponding "Latest update — git-repo-1 (2026-09-05T18:18Z)" paragraph on `/quickstart.md` for the full delta list.
## Previous run
- 2026-09-03T18:09Z — vault HEAD unchanged at `391e4713`, 2 new wiki commits (`7aba9cb` + `58168e7`), 11-dirty-file baseline, the 4 carry-forward untracked directories bumped to 23/18/18/11-day carry-forward. See [`/themes/05-robin-research.md`](/themes/05-robin-research.md) + `/quickstart.md` for the full synthesis of that run.
- 2026-09-04T18:12Z — vault HEAD unchanged at `391e4713`, 2 new wiki commits (`ab49afd` + `88635ed` — the **twenty-first** consecutive sources-sync), 10-dirty-file baseline, the 4 carry-forward untracked directories bumped to 24/19/19/12-day carry-forward. See [`/themes/05-robin-research.md`](/themes/05-robin-research.md) + `/quickstart.md` for the full synthesis of that run.